Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01564 Sequoiadendron giganteum HOM05D004367 ORTHO05D004937 1.1e-182 643.3 343 100.0
SEGI_38687 Sequoiadendron giganteum HOM05D004367 ORTHO05D004937 7.0e-49 198.7 189 59.3
MD03G1226500 Malus domestica HOM05D004367 ORTHO05D004937 5.4e-33 146.0 195 44.1
Prupe.4G182900 Prunus persica HOM05D004367 ORTHO05D004937 5.4e-33 146.0 223 40.4
Cfa020594 Carpinus fangiana HOM05D004367 ORTHO05D004937 1.2e-32 144.8 229 41.5
ATR0730G126 Amborella trichopoda HOM05D004367 ORTHO05D004937 2.1e-32 144.1 223 39.0
Phvul.005G070800 Phaseolus vulgaris HOM05D004367 ORTHO05D004937 1.0e-31 141.7 223 39.5
RcHm_v2.0_Chr5g0034001 Rosa chinensis HOM05D004367 ORTHO05D004937 1.7e-31 141.0 183 44.8
Duzib213G0391 Durio zibethinus HOM05D004367 ORTHO05D004937 2.3e-31 140.6 202 41.6
THA.LOC104799923 Tarenaya hassleriana HOM05D004367 ORTHO05D004937 3.9e-31 139.8 167 44.9
ClCG11G018120 Citrullus lanatus HOM05D004367 ORTHO05D004937 6.6e-31 139.0 171 44.4
FvH4_3g20190 Fragaria vesca HOM05D004367 ORTHO05D004937 6.6e-31 139.0 183 44.8
Glyma.13G277700 Glycine max HOM05D004367 ORTHO05D004937 1.1e-30 138.3 177 45.8
CsaV3_4G033760 Cucumis sativus L. HOM05D004367 ORTHO05D004937 1.5e-30 137.9 171 44.4
HPP92_007964 Vanilla planifolia HOM05D004367 ORTHO05D004937 1.5e-30 137.9 166 45.8
COL.COLO4_09395 Corchorus olitorius HOM05D004367 ORTHO05D004937 1.9e-30 137.5 240 39.2
Thecc.07G087300 Theobroma cacao HOM05D004367 ORTHO05D004937 1.9e-30 137.5 166 47.0
MD11G1244600 Malus domestica HOM05D004367 ORTHO05D004937 2.5e-30 137.1 199 41.2
ECA234G0664 Erigeron canadensis HOM05D004367 ORTHO05D004937 3.3e-30 136.7 166 45.2
MELO3C016705.2 Cucumis melo HOM05D004367 ORTHO05D004937 4.3e-30 136.3 171 44.4
Nn1g06556 Nelumbo nucifera HOM05D004367 ORTHO05D004937 4.3e-30 136.3 264 36.0
TWI39G0928 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 5.6e-30 136.0 203 43.3
A10p11150 Brassica napus HOM05D004367 ORTHO05D004937 9.6e-30 135.2 167 46.1
BraA10t43208Z Brassica rapa HOM05D004367 ORTHO05D004937 9.6e-30 135.2 167 46.1
BcaB08g35738 Brassica carinata HOM05D004367 ORTHO05D004937 1.2e-29 134.8 167 45.5
Lj3g0015758 Lotus japonicus HOM05D004367 ORTHO05D004937 1.2e-29 134.8 182 42.9
Aqoxy4G00819 Aquilegia oxysepala HOM05D004367 ORTHO05D004937 1.6e-29 134.4 203 41.9
BcaC04g20419 Brassica carinata HOM05D004367 ORTHO05D004937 2.1e-29 134.0 167 45.5
C09p43730 Brassica napus HOM05D004367 ORTHO05D004937 2.1e-29 134.0 167 45.5
BolC9t57258H Brassica oleracea HOM05D004367 ORTHO05D004937 2.1e-29 134.0 167 45.5
DCAR_017144 Daucus carota HOM05D004367 ORTHO05D004937 2.1e-29 134.0 228 39.9
arahy.Tifrunner.gnm1.ann1.SV3A8G Arachis hypogaea HOM05D004367 ORTHO05D004937 2.8e-29 133.7 182 41.8
TAR624G0790 Trochodendron aralioides HOM05D004367 ORTHO05D004937 6.2e-29 132.5 236 38.6
FAN16G0302 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.1e-28 131.7 183 45.4
Lj1A844G36 Lonicera japonica HOM05D004367 ORTHO05D004937 1.1e-28 131.7 174 44.3
Oeu005412.1 Olea europaea HOM05D004367 ORTHO05D004937 1.1e-28 131.7 211 39.3
PSO210G1788 Papaver somniferum HOM05D004367 ORTHO05D004937 1.1e-28 131.7 224 39.7
Psat5g242760 Pisum sativum HOM05D004367 ORTHO05D004937 1.4e-28 131.3 227 36.6
Gohir.D01G051200 Gossypium hirsutum HOM05D004367 ORTHO05D004937 1.8e-28 131.0 169 43.2
Sabra16G0262900 Salix brachista HOM05D004367 ORTHO05D004937 1.8e-28 131.0 228 40.4
Thhalv10013073m.g Eutrema salsugineum HOM05D004367 ORTHO05D004937 2.4e-28 130.6 167 44.9
Hma1.2p1_0480F.1_g161800 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 2.4e-28 130.6 186 44.1
Hma1.2p1_0480F.1_g161810 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 2.4e-28 130.6 186 44.1
BcaB05g22072 Brassica carinata HOM05D004367 ORTHO05D004937 3.1e-28 130.2 200 42.0
arahy.Tifrunner.gnm1.ann1.6ZWE2K Arachis hypogaea HOM05D004367 ORTHO05D004937 4.0e-28 129.8 202 38.6
Potri.001G400800 Populus trichocarpa HOM05D004367 ORTHO05D004937 4.0e-28 129.8 175 44.0
Sp6g15840 Schrenkiella parvula HOM05D004367 ORTHO05D004937 4.0e-28 129.8 167 44.9
Sed0004687 Sechium edule HOM05D004367 ORTHO05D004937 4.0e-28 129.8 235 37.9
AagrBONN_evm.TU.Sc2ySwM_362.745 Anthoceros agrestis HOM05D004367 ORTHO05D004937 5.2e-28 129.4 171 45.0
MBI07_g32654_MAGBIO Magnolia biondii HOM05D004367 ORTHO05D004937 5.2e-28 129.4 225 37.8
Sc16g0006960 Simmondsia chinensis HOM05D004367 ORTHO05D004937 5.2e-28 129.4 176 42.6
Mapoly0006s0037 Marchantia polymorpha HOM05D004367 ORTHO05D004937 6.8e-28 129.0 191 40.8
Lsat_1_v5_gn_5_127821 Lactuca sativa HOM05D004367 ORTHO05D004937 1.2e-27 128.3 167 42.5
Atru.chr2.2673 Acer truncatum HOM05D004367 ORTHO05D004937 1.5e-27 127.9 201 40.3
Carub.0008s1407 Capsella rubella HOM05D004367 ORTHO05D004937 1.5e-27 127.9 167 44.3
Gorai.002G071000 Gossypium raimondii HOM05D004367 ORTHO05D004937 1.5e-27 127.9 169 42.6
TPR.G38993 Trifolium pratense HOM05D004367 ORTHO05D004937 1.5e-27 127.9 183 41.0
Aa31LG3G10140 Aethionema arabicum HOM05D004367 ORTHO05D004937 2.6e-27 127.1 107 57.9
CARHR266920 Cardamine hirsuta HOM05D004367 ORTHO05D004937 2.6e-27 127.1 160 43.8
AT5G53770 Arabidopsis thaliana HOM05D004367 ORTHO05D004937 3.4e-27 126.7 168 42.9
Medtr2g079330 Medicago truncatula HOM05D004367 ORTHO05D004937 3.4e-27 126.7 166 42.2
CiPaw.11G168700 Carya illinoinensis HOM05D004367 ORTHO05D004937 4.4e-27 126.3 245 37.1
AL8G28710 Arabidopsis lyrata HOM05D004367 ORTHO05D004937 5.8e-27 125.9 167 43.7
Ciclev10008024m.g Citrus clementina HOM05D004367 ORTHO05D004937 5.8e-27 125.9 188 39.9
Eucgr.F01119 Eucalyptus grandis HOM05D004367 ORTHO05D004937 5.8e-27 125.9 222 38.7
Manes.03G110700 Manihot esculenta HOM05D004367 ORTHO05D004937 5.8e-27 125.9 165 42.4
TWI38G0759 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 5.8e-27 125.9 166 42.8
Cpa.g.sc80.55 Carica papaya HOM05D004367 ORTHO05D004937 9.9e-27 125.2 246 37.4
Dinv20169 Davidia involucrata HOM05D000397 ORTHO05D004937 1.7e-26 124.4 223 38.1
FAN21G3330 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.7e-26 124.4 107 56.1
HanXRQChr12g0361521 Helianthus annuus HOM05D004367 ORTHO05D004937 2.9e-26 123.6 214 38.3
Lalb_Chr25g0286441 Lupinus albus HOM05D004367 ORTHO05D004937 8.4e-26 122.1 178 40.4
MSTRG.15226 Avicennia marina HOM05D004367 ORTHO05D004937 1.1e-25 121.7 256 35.5
PGSC0003DMG400025036 Solanum tuberosum HOM05D004367 ORTHO05D004937 1.1e-25 121.7 227 37.4
GSVIVG01014349001 Vitis vinifera HOM05D004367 ORTHO05D004937 1.4e-25 121.3 235 36.6
SMO356G0731 Selaginella moellendorffii HOM05D004367 ORTHO05D004937 1.9e-25 120.9 112 54.5
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 2.4e-25 120.6 203 38.4
SalBow8G0254 Salvia bowleyana HOM05D004367 ORTHO05D004937 5.4e-25 119.4 220 37.7
SGA_v2.0_scaffold73G24268 Striga asiatica HOM05D004367 ORTHO05D004937 5.4e-25 119.4 205 39.5
CSS0040505 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 9.3e-25 118.6 251 37.1
Ca_01836_v3 Cicer arietinum L. HOM05D004367 ORTHO05D004937 9.3e-25 118.6 237 34.6
FAN25G3266 Fragaria x ananassa HOM05D004367 ORTHO05D004937 9.3e-25 118.6 232 35.8
Oeu060551.2 Olea europaea HOM05D004367 ORTHO05D004937 9.3e-25 118.6 208 38.5
Rhsim06G0197900 Rhododendron simsii HOM05D004367 ORTHO05D004937 9.3e-25 118.6 167 41.3
Migut.M00812 Erythranthe guttata HOM05D004367 ORTHO05D004937 1.6e-24 117.9 107 54.2
Actinidia12812 Actinidia chinensis HOM05D004367 ORTHO05D004937 2.1e-24 117.5 227 36.6
Nitab4.5_0000207g0150 Nicotiana tabacum HOM05D004367 ORTHO05D004937 2.1e-24 117.5 185 40.5
Pp3c24_20390 Physcomitrium patens HOM05D004367 ORTHO05D004937 2.1e-24 117.5 277 34.3
unitig_899.g15291 Utricularia gibba HOM05D004367 ORTHO05D004937 2.1e-24 117.5 199 41.2
CBR_g262 Chara braunii HOM05D004367 ORTHO05D004937 2.7e-24 117.1 105 54.3
Nitab4.5_0002383g0110 Nicotiana tabacum HOM05D004367 ORTHO05D004937 3.5e-24 116.7 174 41.4
Solyc10g006990.3 Solanum lycopersicum HOM05D004367 ORTHO05D004937 3.5e-24 116.7 227 37.4
Ah.06g184060 Amaranthus hybridus HOM05D004367 ORTHO05D004937 4.6e-24 116.3 173 42.2
CSS0040030 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 4.6e-24 116.3 248 36.3
Sopen10g002900 Solanum pennellii HOM05D004367 ORTHO05D004937 1.0e-23 115.2 225 36.4
EL10Ac4g08166 Beta vulgaris HOM05D004367 ORTHO05D004937 1.3e-23 114.8 168 39.3
Hund22921 Selenicereus undatus HOM05D004367 ORTHO05D004937 2.3e-23 114.0 224 38.4
vmacro11860 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 2.3e-23 114.0 230 36.5
vmacro22868 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 2.3e-23 114.0 230 36.5
Zm00001eb157140 Zea mays HOM05D004367 ORTHO05D004937 2.3e-23 114.0 107 50.5
PGR083G2352 Punica granatum HOM05D004367 ORTHO05D004937 3.3e-22 110.2 240 36.2
QL08p021548 Quercus lobata HOM05D004367 ORTHO05D004937 1.8e-20 104.4 257 32.7
Ciclev10008854m.g Citrus clementina HOM05D004367 ORTHO05D004937 4.0e-20 103.2 78 55.1
VMungo1080G0845 Vigna mungo HOM05D004367 ORTHO05D004937 2.2e-18 97.4 70 62.9
MCO11G842 Micromonas commoda HOM05D004367 ORTHO05D004937 8.4e-18 95.5 77 53.2
Gohir.A01G064120 Gossypium hirsutum HOM05D004367 ORTHO05D004937 1.9e-17 94.4 239 33.1
C02p17970 Brassica napus HOM05D004367 ORTHO05D004937 4.2e-17 93.2 151 38.4
QL05p086116 Quercus lobata HOM05D004367 ORTHO05D004937 4.2e-17 93.2 67 62.7
Cre17.g720750 Chlamydomonas reinhardtii HOM05D004367 ORTHO05D004937 3.5e-16 90.1 115 40.0
Dinv04310 Davidia involucrata HOM05D004367 ORTHO05D004937 1.3e-15 88.2 173 37.0
PRCOL_00005020 Prasinoderma coloniale HOM05D004367 ORTHO05D004937 1.7e-15 87.8 119 41.2
SGA_v2.0_scaffold34G13821 Striga asiatica HOM05D004367 ORTHO05D004937 3.0e-15 87.0 160 35.0
Peaxi162Scf00027g02615 Petunia axillaris HOM05D004367 ORTHO05D004937 2.5e-14 84.0 64 57.8
AUR62029381 Chenopodium quinoa HOM05D004367 ORTHO05D004937 2.8e-13 80.5 289 28.0
HPP92_008014 Vanilla planifolia HOM05D004367 ORTHO05D004937 5.8e-11 72.8 117 38.5
CDE10G0244 Ceratophyllum demersum HOM05D004367 ORTHO05D004937 7.6e-11 72.4 136 38.2
Cc00_g35090 Coffea canephora HOM05D004367 ORTHO05D004937 7.6e-11 72.4 152 36.2
AUR62034287 Chenopodium quinoa HOM05D004367 ORTHO05D004937 2.2e-10 70.9 176 38.1
BcaC03g14387 Brassica carinata HOM05D004367 ORTHO05D004937 1.9e-09 67.8 146 34.2
Hma1.2p1_2210F.1_g317160 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 5.4e-09 66.2 47 61.7
CBR_g39468 Chara braunii HOM05D004367 ORTHO05D004937 1.0e-07 62.0 116 37.1
Cc05_g12110 Coffea canephora HOM05D004367 ORTHO05D004937 1.0e-07 62.0 49 53.1
CSS0017665 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.5e-06 58.2 52 46.2
CSS0018031 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.5e-06 58.2 52 46.2


User provided reference genes

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