Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 4.3e-192 674.5 339 100.0
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 3.7e-135 485.3 326 74.8
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.3e-132 476.9 322 75.2
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 6.6e-132 474.6 325 73.8
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 6.6e-132 474.6 325 73.2
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 6.6e-132 474.6 315 74.6
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.9e-131 473.0 310 75.8
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 4.3e-131 471.9 317 74.8
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 1.2e-130 470.3 331 72.5
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.2e-130 470.3 324 72.5
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 1.6e-130 469.9 299 78.3
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 2.8e-130 469.2 299 77.9
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 4.7e-130 468.4 314 74.8
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 4.7e-130 468.4 317 74.8
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 6.1e-130 468.0 307 75.9
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 6.1e-130 468.0 317 73.8
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 8.0e-130 467.6 326 74.5
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 8.0e-130 467.6 330 72.7
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 8.0e-130 467.6 325 72.6
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 3.0e-129 465.7 315 74.9
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 3.0e-129 465.7 315 75.2
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 3.0e-129 465.7 323 73.1
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 4.0e-129 465.3 299 77.3
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 5.2e-129 464.9 337 71.2
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 5.2e-129 464.9 318 74.5
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 6.8e-129 464.5 332 71.1
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 1.2e-128 463.8 299 77.3
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.2e-128 463.8 315 74.6
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.2e-128 463.8 299 76.9
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 1.5e-128 463.4 308 76.3
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 2.0e-128 463.0 317 74.4
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 2.0e-128 463.0 336 72.3
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 5.8e-128 461.5 319 72.7
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 5.8e-128 461.5 298 77.2
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 5.8e-128 461.5 314 72.9
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 5.8e-128 461.5 335 70.7
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 5.8e-128 461.5 299 76.6
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 7.5e-128 461.1 324 71.9
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 7.5e-128 461.1 299 76.3
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 7.5e-128 461.1 325 72.0
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.3e-127 460.3 299 76.6
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 1.7e-127 459.9 299 76.6
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 2.2e-127 459.5 307 74.6
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 2.2e-127 459.5 309 74.8
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 2.9e-127 459.1 299 74.9
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 3.7e-127 458.8 314 75.2
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 3.7e-127 458.8 299 75.9
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 3.7e-127 458.8 299 75.9
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 3.7e-127 458.8 333 69.7
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 3.7e-127 458.8 333 69.7
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 6.4e-127 458.0 299 76.6
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 6.4e-127 458.0 299 76.3
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 6.4e-127 458.0 299 76.3
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 1.9e-126 456.4 299 74.9
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 3.2e-126 455.7 302 75.2
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 7.0e-126 454.5 357 66.9
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 9.2e-126 454.1 317 72.6
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.2e-125 453.8 299 75.6
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.2e-125 453.8 308 74.4
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 1.6e-125 453.4 314 72.3
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 3.5e-125 452.2 299 75.9
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 3.5e-125 452.2 314 72.6
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 3.9e-124 448.7 308 74.7
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 4.7e-122 441.8 307 72.3
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 6.8e-121 438.0 353 67.1
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 2.0e-120 436.4 298 74.5
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 2.0e-120 436.4 294 74.8
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.0e-120 436.4 384 62.2
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 2.6e-120 436.0 305 72.5
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 7.5e-120 434.5 293 74.1
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.7e-119 433.3 359 63.0
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 4.9e-119 431.8 298 74.2
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.7e-117 426.0 294 72.4
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 9.5e-115 417.5 321 69.5
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.2e-114 417.2 254 79.1
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 5.2e-113 411.8 282 74.1
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 6.8e-113 411.4 316 68.0
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 2.6e-112 409.5 299 70.2
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 5.8e-112 408.3 321 66.4
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 6.4e-111 404.8 349 62.8
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.4e-110 403.7 307 68.1
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 9.2e-110 401.0 315 66.3
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 1.2e-109 400.6 334 63.8
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 1.0e-108 397.5 280 72.1
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 9.5e-107 391.0 306 68.3
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 3.6e-106 389.0 304 67.8
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 5.2e-105 385.2 313 64.9
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 1.5e-104 383.6 250 73.6
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 2.6e-104 382.9 282 70.9
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 3.4e-104 382.5 489 47.4
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 4.4e-104 382.1 290 65.5
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 1.7e-103 380.2 418 51.9
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 2.9e-103 379.4 287 68.3
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 4.9e-103 378.6 230 80.0
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 1.9e-102 376.7 303 66.7
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 1.6e-101 373.6 292 65.4
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 8.7e-100 367.9 243 75.3
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 2.4e-97 359.8 250 71.6
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 1.4e-94 350.5 302 62.6
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.6e-90 337.0 307 60.6
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.5e-88 330.5 303 55.4
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 3.4e-88 329.3 253 68.0
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 9.9e-88 327.8 242 68.6
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.1e-86 324.3 216 73.1
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 2.1e-82 310.1 217 71.4
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 1.4e-81 307.4 215 68.8
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.2e-79 300.1 322 52.5
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.6e-77 293.9 265 60.4
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 2.2e-71 273.5 302 50.3
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.2e-64 251.1 182 70.3
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.3e-63 247.7 153 77.1
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 5.1e-60 235.7 175 69.7
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 3.1e-57 226.5 220 57.7
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 4.1e-57 226.1 151 73.5
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.3e-55 221.1 120 86.7
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 9.4e-54 214.9 156 70.5
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.0e-51 207.2 488 33.2
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 9.1e-49 198.4 112 82.1
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 2.7e-45 186.8 139 69.1
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 2.0e-43 180.6 113 76.1
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 5.3e-41 172.6 265 35.8
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 9.4e-38 161.8 228 44.7
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 1.6e-32 144.4 290 32.4
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.7e-29 133.7 97 68.0
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 6.3e-26 122.5 281 29.5
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 1.4e-25 121.3 66 83.3
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 5.5e-22 109.4 54 96.3
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 6.8e-20 102.4 63 76.2
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 3.4e-19 100.1 67 74.6
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 5.7e-19 99.4 52 88.5
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 7.5e-19 99.0 55 83.6
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 1.7e-18 97.8 70 64.3
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 5.9e-16 89.4 49 83.7
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 1.5e-14 84.7 57 75.4
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 1.1e-09 68.6 43 74.4
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.4e-09 68.2 66 56.1


User provided reference genes

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