Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01219 Sequoiadendron giganteum HOM05D003586 ORTHO05D004036 9.1e-165 583.6 307 100.0
PSO675G9104 Papaver somniferum HOM05D003586 ORTHO05D004036 1.8e-32 144.1 226 38.5
Lj8C46T11 Lonicera japonica HOM05D003586 ORTHO05D004036 3.1e-32 143.3 222 39.2
PSO732G0142 Papaver somniferum HOM05D003586 ORTHO05D004036 7.0e-32 142.1 226 38.9
ATR0057G101 Amborella trichopoda HOM05D003586 ORTHO05D004036 9.1e-32 141.7 227 38.3
CSS0040773 Camellia sinensis var. sinensis HOM05D003586 ORTHO05D004036 4.5e-31 139.4 228 39.0
CSS0004894 Camellia sinensis var. sinensis HOM05D003586 ORTHO05D004036 5.9e-31 139.0 228 39.0
Nn1g00886 Nelumbo nucifera HOM05D003586 ORTHO05D004036 1.7e-30 137.5 232 38.4
MBI05_g26488_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 5.0e-30 136.0 226 37.6
Actinidia13607 Actinidia chinensis HOM05D003586 ORTHO05D004036 2.1e-28 130.6 257 35.4
HanXRQChr05g0139491 Helianthus annuus HOM05D003586 ORTHO05D004036 3.6e-28 129.8 239 33.9
TAR375G0563 Trochodendron aralioides HOM05D003586 ORTHO05D004036 4.7e-28 129.4 242 34.7
FAN10G2285 Fragaria x ananassa HOM05D003586 ORTHO05D004036 8.0e-28 128.6 230 32.6
FAN01G1639 Fragaria x ananassa HOM05D003586 ORTHO05D004036 1.0e-27 128.3 220 33.2
FvH4_7g26990 Fragaria vesca HOM05D003586 ORTHO05D004036 2.3e-27 127.1 220 33.6
FAN06G2502 Fragaria x ananassa HOM05D003586 ORTHO05D004036 3.0e-27 126.7 220 33.6
FAN03G1177 Fragaria x ananassa HOM05D003586 ORTHO05D004036 6.8e-27 125.6 220 32.7
CiPaw.07G185400 Carya illinoinensis HOM05D003586 ORTHO05D004036 2.6e-26 123.6 234 32.9
Ciclev10004122m.g Citrus clementina HOM05D003586 ORTHO05D004036 2.6e-26 123.6 236 34.3
Aqoxy7G00839 Aquilegia oxysepala HOM05D003586 ORTHO05D004036 3.4e-26 123.2 241 33.2
MD07G1249300 Malus domestica HOM05D003586 ORTHO05D004036 3.4e-26 123.2 231 32.9
Rhsim03G0161600 Rhododendron simsii HOM05D003586 ORTHO05D004036 5.7e-26 122.5 228 37.7
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 7.5e-26 122.1 229 32.8
GSVIVG01013976001 Vitis vinifera HOM05D003586 ORTHO05D004036 1.3e-25 121.3 230 35.2
vmacro06834 Vaccinium macrocarpon HOM05D003586 ORTHO05D004036 2.2e-25 120.6 230 34.8
DCAR_027698 Daucus carota HOM05D003586 ORTHO05D004036 2.8e-25 120.2 245 32.7
RcHm_v2.0_Chr1g0373721 Rosa chinensis HOM05D003586 ORTHO05D004036 2.8e-25 120.2 221 31.2
ClCG07G016940 Citrullus lanatus HOM05D003586 ORTHO05D004036 4.9e-25 119.4 237 28.7
Cfa013573 Carpinus fangiana HOM05D003586 ORTHO05D004036 6.3e-25 119.0 242 31.8
Oeu060859.1 Olea europaea HOM05D003586 ORTHO05D004036 8.3e-25 118.6 236 33.5
CANSAT56G2655 Cannabis sativa HOM05D003586 ORTHO05D004036 1.1e-24 118.2 234 31.6
Haze_22192 Corylus avellana HOM05D003586 ORTHO05D004036 1.1e-24 118.2 242 31.8
Prupe.2G273000 Prunus persica HOM05D003586 ORTHO05D004036 4.1e-24 116.3 234 30.3
Lsat_1_v5_gn_8_9561 Lactuca sativa HOM05D003586 ORTHO05D004036 5.4e-24 115.9 239 32.2
Dinv06595 Davidia involucrata HOM05D003586 ORTHO05D004036 9.2e-24 115.2 234 32.9
Cc02_g04680 Coffea canephora HOM05D003586 ORTHO05D004036 1.2e-23 114.8 231 31.2
Duzib205G0263 Durio zibethinus HOM05D003586 ORTHO05D004036 1.2e-23 114.8 230 33.0
Manes.14G038400 Manihot esculenta HOM05D003586 ORTHO05D004036 1.2e-23 114.8 259 31.3
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 2.0e-23 114.0 230 34.3
Hma1.2p1_1404F.1_g281290 Hydrangea macrophylla HOM05D003586 ORTHO05D004036 2.0e-23 114.0 221 35.7
Atru.chr1.904 Acer truncatum HOM05D003586 ORTHO05D004036 3.5e-23 113.2 235 31.9
Thecc.03G149300 Theobroma cacao HOM05D003586 ORTHO05D004036 3.5e-23 113.2 244 30.7
Sed0010855 Sechium edule HOM05D003586 ORTHO05D004036 4.5e-23 112.8 234 27.4
EL10Ac7g18161 Beta vulgaris HOM05D003586 ORTHO05D004036 7.8e-23 112.1 231 33.3
QL09p028029 Quercus lobata HOM05D003586 ORTHO05D004036 7.8e-23 112.1 286 29.7
AUR62025663 Chenopodium quinoa HOM05D003586 ORTHO05D004036 1.0e-22 111.7 222 35.6
Potri.003G151500 Populus trichocarpa HOM05D003586 ORTHO05D004036 1.0e-22 111.7 227 33.5
SalBow2G0990 Salvia bowleyana HOM05D003586 ORTHO05D004036 1.0e-22 111.7 270 29.6
Gohir.D07G047701 Gossypium hirsutum HOM05D003586 ORTHO05D004036 1.3e-22 111.3 229 31.0
AUR62001342 Chenopodium quinoa HOM05D003586 ORTHO05D004036 2.3e-22 110.5 222 34.7
Gorai.001G050900 Gossypium raimondii HOM05D003586 ORTHO05D004036 2.3e-22 110.5 229 31.0
THA.LOC104811536 Tarenaya hassleriana HOM05D003586 ORTHO05D004036 2.3e-22 110.5 236 32.2
Ah.08g217720 Amaranthus hybridus HOM05D003586 ORTHO05D004036 5.0e-22 109.4 234 34.2
Sp3g05470 Schrenkiella parvula HOM05D003586 ORTHO05D004036 5.0e-22 109.4 246 31.7
AT3G06530 Arabidopsis thaliana HOM05D003586 ORTHO05D004036 6.6e-22 109.0 283 31.1
Sabra03G0109700 Salix brachista HOM05D003586 ORTHO05D004036 6.6e-22 109.0 227 32.6
CsaV3_4G004170 Cucumis sativus L. HOM05D003586 ORTHO05D004036 1.1e-21 108.2 234 26.9
SGA_v2.0_scaffold56G19917 Striga asiatica HOM05D003586 ORTHO05D004036 1.5e-21 107.8 234 30.8
BraA03t12653Z Brassica rapa HOM05D003586 ORTHO05D004036 1.9e-21 107.5 245 32.7
Nitab4.5_0003173g0040 Nicotiana tabacum HOM05D003586 ORTHO05D004036 1.9e-21 107.5 249 30.9
A03p34730 Brassica napus HOM05D003586 ORTHO05D004036 2.5e-21 107.1 247 32.8
C03p42210 Brassica napus HOM05D003586 ORTHO05D004036 2.5e-21 107.1 247 32.4
Sc20g0000680 Simmondsia chinensis HOM05D003586 ORTHO05D004036 2.5e-21 107.1 234 30.3
Solyc03g093480.3 Solanum lycopersicum HOM05D003586 ORTHO05D004036 3.3e-21 106.7 249 30.5
Sopen03g024310 Solanum pennellii HOM05D003586 ORTHO05D004036 3.3e-21 106.7 249 30.5
Nitab4.5_0005495g0020 Nicotiana tabacum HOM05D003586 ORTHO05D004036 4.3e-21 106.3 249 30.5
TWI23G0434 Tripterygium wilfordii HOM05D003586 ORTHO05D004036 9.5e-21 105.1 240 30.4
Aa31LG5G17060 Aethionema arabicum HOM05D003586 ORTHO05D004036 1.2e-20 104.8 235 33.2
Psat2g013320 Pisum sativum HOM05D003586 ORTHO05D004036 2.1e-20 104.0 230 28.7
C05p60700 Brassica napus HOM05D003586 ORTHO05D004036 2.8e-20 103.6 241 30.3
Thhalv10019871m.g Eutrema salsugineum HOM05D003586 ORTHO05D004036 2.8e-20 103.6 241 31.1
MSTRG.139 Avicennia marina HOM05D003586 ORTHO05D004036 3.6e-20 103.2 229 33.2
BolC3t16501H Brassica oleracea HOM05D003586 ORTHO05D004036 3.6e-20 103.2 247 31.6
Eucgr.A02921 Eucalyptus grandis HOM05D003586 ORTHO05D004036 4.7e-20 102.8 240 31.7
CARHR081080 Cardamine hirsuta HOM05D003586 ORTHO05D004036 8.0e-20 102.1 246 31.7
CAN.G485.20 Capsicum annuum HOM05D003586 ORTHO05D004036 1.8e-19 100.9 247 31.2
AL3G17560 Arabidopsis lyrata HOM05D003586 ORTHO05D004036 3.0e-19 100.1 233 33.5
Gohir.A07G043301 Gossypium hirsutum HOM05D003586 ORTHO05D004036 3.0e-19 100.1 238 29.8
CBR_g19186 Chara braunii HOM05D003586 ORTHO05D004036 1.2e-18 98.2 286 30.1
Peaxi162Scf00271g00727 Petunia axillaris HOM05D003586 ORTHO05D004036 1.2e-18 98.2 245 29.0
arahy.Tifrunner.gnm1.ann1.1899LM Arachis hypogaea HOM05D003586 ORTHO05D004036 2.0e-18 97.4 233 27.9
arahy.Tifrunner.gnm1.ann1.DI5547 Arachis hypogaea HOM05D003586 ORTHO05D004036 2.0e-18 97.4 233 27.9
Carub.0003s0599 Capsella rubella HOM05D003586 ORTHO05D004036 2.0e-18 97.4 231 33.3
Ca_26483_v3 Cicer arietinum L. HOM05D003586 ORTHO05D004036 2.0e-18 97.4 230 28.3
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 3.4e-18 96.7 230 28.7
Pp3c3_10580 Physcomitrium patens HOM05D003586 ORTHO05D004036 7.5e-18 95.5 237 29.5
Phvul.008G266400 Phaseolus vulgaris HOM05D003586 ORTHO05D004036 1.3e-17 94.7 245 26.5
A05p41500 Brassica napus HOM05D003586 ORTHO05D004036 2.2e-17 94.0 246 29.7
BraA05t22871Z Brassica rapa HOM05D003586 ORTHO05D004036 2.2e-17 94.0 246 29.7
BolC5t34730H Brassica oleracea HOM05D003586 ORTHO05D004036 1.4e-16 91.3 241 28.2
Hund18595 Selenicereus undatus HOM05D003586 ORTHO05D004036 3.2e-16 90.1 261 26.8
Glyma.02G290200 Glycine max HOM05D003586 ORTHO05D004036 5.4e-16 89.4 242 25.6
LjContig00272g0012466 Lotus japonicus HOM05D003586 ORTHO05D004036 5.4e-16 89.4 236 27.1
Mapoly0043s0008 Marchantia polymorpha HOM05D003586 ORTHO05D004036 5.4e-16 89.4 234 29.5
HPP92_014934 Vanilla planifolia HOM05D003586 ORTHO05D004036 1.6e-15 87.8 231 27.7
Cpa.g.sc13.262 Carica papaya HOM05D003586 ORTHO05D004036 4.6e-15 86.3 151 31.8
CDE04G1406 Ceratophyllum demersum HOM05D003586 ORTHO05D004036 4.6e-15 86.3 195 29.2
Lalb_Chr04g0248471 Lupinus albus HOM05D003586 ORTHO05D004036 4.6e-15 86.3 250 25.2
SHI14045 Sapria himalayana HOM05D003586 ORTHO05D004036 1.3e-14 84.7 222 27.9
Migut.O00372 Erythranthe guttata HOM05D003586 ORTHO05D004036 3.0e-14 83.6 227 27.8
Glyma.14G024600 Glycine max HOM05D003586 ORTHO05D004036 5.0e-14 82.8 245 24.1
Medtr5g092370 Medicago truncatula HOM05D003586 ORTHO05D004036 6.6e-14 82.4 228 27.2
unitig_62.g23920 Utricularia gibba HOM05D003586 ORTHO05D004036 8.6e-14 82.0 303 26.1
Zm00001eb123540 Zea mays HOM05D003586 ORTHO05D004036 2.5e-13 80.5 226 26.1
AagrBONN_evm.TU.Sc2ySwM_344.3595 Anthoceros agrestis HOM05D003586 ORTHO05D004036 3.3e-13 80.1 264 27.7
PGR042G0622 Punica granatum HOM05D003586 ORTHO05D004036 2.9e-09 67.0 239 23.8
Lsat_1_v5_gn_1_161 Lactuca sativa HOM05D003586 ORTHO05D004036 4.9e-09 66.2 108 37.0
PSO782G1165 Papaver somniferum HOM05D003586 ORTHO05D004036 3.5e-07 60.1 159 27.7


User provided reference genes

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