Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00968 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 8.1e-86 320.5 174 100.0
Thecc.07G071400 Theobroma cacao HOM05D005990 ORTHO05D007908 8.5e-51 204.1 137 81.8
Gohir.A13G143600 Gossypium hirsutum HOM05D005990 ORTHO05D007908 1.4e-50 203.4 135 81.5
COL.COLO4_09478 Corchorus olitorius HOM05D005990 ORTHO05D007908 2.5e-50 202.6 138 81.2
Os11g0140800 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 2.5e-50 202.6 131 83.2
Os12g0137300 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 2.5e-50 202.6 131 83.2
Gohir.D13G148400 Gossypium hirsutum HOM05D005990 ORTHO05D007908 4.2e-50 201.8 135 80.7
Gorai.013G166200 Gossypium raimondii HOM05D005990 ORTHO05D007908 4.2e-50 201.8 135 80.7
CSS0030462 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D007908 5.5e-50 201.4 135 80.7
Lsat_1_v5_gn_5_6860 Lactuca sativa HOM05D005990 ORTHO05D007908 5.5e-50 201.4 135 80.0
Actinidia35278 Actinidia chinensis HOM05D005990 ORTHO05D007908 7.2e-50 201.1 135 80.0
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 7.2e-50 201.1 132 81.1
Duzib213G0189 Durio zibethinus HOM05D005990 ORTHO05D007908 9.4e-50 200.7 135 80.0
Hma1.2p1_1143F.1_g261060 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 9.4e-50 200.7 135 80.7
Nn1g06745 Nelumbo nucifera HOM05D005990 ORTHO05D007908 9.4e-50 200.7 135 78.5
TAR626G1157 Trochodendron aralioides HOM05D005990 ORTHO05D007908 2.1e-49 199.5 135 80.0
ECA246G2706 Erigeron canadensis HOM05D005990 ORTHO05D007908 2.7e-49 199.1 135 80.7
Dinv22366 Davidia involucrata HOM05D005990 ORTHO05D007908 4.7e-49 198.4 135 81.5
Sed0021962 Sechium edule HOM05D005990 ORTHO05D007908 4.7e-49 198.4 135 81.5
HanXRQChr05g0156471 Helianthus annuus HOM05D005990 ORTHO05D007908 6.1e-49 198.0 135 80.0
Ca_11848_v3 Cicer arietinum L. HOM05D005990 ORTHO05D007908 8.0e-49 197.6 138 78.3
RhsimUnG0258900 Rhododendron simsii HOM05D005990 ORTHO05D007908 8.0e-49 197.6 135 80.0
GSVIVG01014430001 Vitis vinifera HOM05D005990 ORTHO05D007908 8.0e-49 197.6 135 79.3
MBI02_g10990_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 1.0e-48 197.2 134 77.6
Aqoxy4G01398 Aquilegia oxysepala HOM05D005990 ORTHO05D007908 1.4e-48 196.8 138 76.8
ATR0751G163 Amborella trichopoda HOM05D005990 ORTHO05D007908 1.8e-48 196.4 135 78.5
Medtr8g464410 Medicago truncatula HOM05D005990 ORTHO05D007908 1.8e-48 196.4 138 78.3
DCAR_008702 Daucus carota HOM05D005990 ORTHO05D007908 2.3e-48 196.1 135 77.8
Manes.03G116500 Manihot esculenta HOM05D005990 ORTHO05D007908 2.3e-48 196.1 135 77.0
Potri.001G406700 Populus trichocarpa HOM05D005990 ORTHO05D007908 2.3e-48 196.1 135 80.0
BcaC03g14345 Brassica carinata HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 79.3
C02p17170 Brassica napus HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 79.3
BolC2t07817H Brassica oleracea HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 79.3
ClCG10G006520 Citrullus lanatus HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 80.0
MELO3C016553.2 Cucumis melo HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 80.0
CsaV3_3G005970 Cucumis sativus L. HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 80.0
QL08p018038 Quercus lobata HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 80.0
Sabra16G0268100 Salix brachista HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 79.3
Sabra16G0270400 Salix brachista HOM05D005990 ORTHO05D007908 3.0e-48 195.7 135 79.3
Glyma.06G254100 Glycine max HOM05D005990 ORTHO05D007908 3.9e-48 195.3 135 77.8
Sp6g16330 Schrenkiella parvula HOM05D005990 ORTHO05D007908 3.9e-48 195.3 135 79.3
BcaB05g22125 Brassica carinata HOM05D005990 ORTHO05D007908 5.2e-48 194.9 135 80.0
Lalb_Chr01g0006431 Lupinus albus HOM05D005990 ORTHO05D007908 5.2e-48 194.9 135 79.3
Phvul.011G155100 Phaseolus vulgaris HOM05D005990 ORTHO05D007908 5.2e-48 194.9 138 76.1
vmacro09559 Vaccinium macrocarpon HOM05D005990 ORTHO05D007908 5.2e-48 194.9 135 77.8
A02p10420 Brassica napus HOM05D005990 ORTHO05D007908 6.7e-48 194.5 135 79.3
BraA02t06108Z Brassica rapa HOM05D005990 ORTHO05D007908 6.7e-48 194.5 135 79.3
CiPaw.11G176500 Carya illinoinensis HOM05D005990 ORTHO05D007908 6.7e-48 194.5 137 79.6
Eucgr.F03355 Eucalyptus grandis HOM05D005990 ORTHO05D007908 6.7e-48 194.5 127 81.1
Lj3g0001925 Lotus japonicus HOM05D005990 ORTHO05D007908 6.7e-48 194.5 131 80.9
PGR031G1979 Punica granatum HOM05D005990 ORTHO05D007908 6.7e-48 194.5 138 75.4
HPP92_018217 Vanilla planifolia HOM05D005990 ORTHO05D007908 8.8e-48 194.1 134 76.1
CANSAT11G2493 Cannabis sativa HOM05D005990 ORTHO05D007908 1.1e-47 193.7 135 77.0
Cfa020505 Carpinus fangiana HOM05D005990 ORTHO05D007908 1.1e-47 193.7 135 81.5
Haze_09528 Corylus avellana HOM05D005990 ORTHO05D007908 1.1e-47 193.7 135 81.5
QL08p017936 Quercus lobata HOM05D005990 ORTHO05D007908 1.1e-47 193.7 135 79.3
CDE05G0179 Ceratophyllum demersum HOM05D005990 ORTHO05D007908 1.5e-47 193.4 135 76.3
Glyma.12G147300 Glycine max HOM05D005990 ORTHO05D007908 1.5e-47 193.4 135 77.0
PSO210G5100 Papaver somniferum HOM05D005990 ORTHO05D007908 1.5e-47 193.4 131 79.4
VMungo1127G2019 Vigna mungo HOM05D005990 ORTHO05D007908 1.5e-47 193.4 138 75.4
Psat0s617g0120 Pisum sativum HOM05D005990 ORTHO05D007908 2.0e-47 193.0 138 76.8
AUR62029313 Chenopodium quinoa HOM05D005990 ORTHO05D007908 2.6e-47 192.6 135 75.6
EL10Ac4g08059 Beta vulgaris HOM05D005990 ORTHO05D007908 3.3e-47 192.2 135 74.8
Ah.04g165420 Amaranthus hybridus HOM05D005990 ORTHO05D007908 4.4e-47 191.8 135 74.1
Aa31LG3G10250 Aethionema arabicum HOM05D005990 ORTHO05D007908 5.7e-47 191.4 135 79.3
Sc16g0006780 Simmondsia chinensis HOM05D005990 ORTHO05D007908 5.7e-47 191.4 135 75.6
AL8G29620 Arabidopsis lyrata HOM05D005990 ORTHO05D007908 7.4e-47 191.0 135 76.3
AT5G54290 Arabidopsis thaliana HOM05D005990 ORTHO05D007908 7.4e-47 191.0 135 76.3
SGA_v2.0_scaffold9G04955 Striga asiatica HOM05D005990 ORTHO05D007908 7.4e-47 191.0 135 76.3
AUR62015602 Chenopodium quinoa HOM05D005990 ORTHO05D007908 9.7e-47 190.7 135 74.1
FvH4_3g20940 Fragaria vesca HOM05D005990 ORTHO05D007908 9.7e-47 190.7 127 78.7
FAN11G3728 Fragaria x ananassa HOM05D005990 ORTHO05D007908 9.7e-47 190.7 127 78.7
Prupe.4G189900 Prunus persica HOM05D005990 ORTHO05D007908 9.7e-47 190.7 135 76.3
RcHm_v2.0_Chr5g0035361 Rosa chinensis HOM05D005990 ORTHO05D007908 9.7e-47 190.7 127 78.7
Carub.0008s1464 Capsella rubella HOM05D005990 ORTHO05D007908 1.3e-46 190.3 135 76.3
CARHR267580 Cardamine hirsuta HOM05D005990 ORTHO05D007908 1.3e-46 190.3 135 77.8
Lj8A160T67 Lonicera japonica HOM05D005990 ORTHO05D007908 1.3e-46 190.3 135 75.6
MSTRG.15206 Avicennia marina HOM05D005990 ORTHO05D007908 1.7e-46 189.9 135 77.0
Thhalv10013940m.g Eutrema salsugineum HOM05D005990 ORTHO05D007908 2.2e-46 189.5 135 77.8
Cpa.g.sc80.114 Carica papaya HOM05D005990 ORTHO05D007908 2.8e-46 189.1 135 75.6
MBI02_g35910_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 2.8e-46 189.1 151 70.9
SalBow7G3955 Salvia bowleyana HOM05D005990 ORTHO05D007908 6.3e-46 188.0 135 74.8
MD11G1237300 Malus domestica HOM05D005990 ORTHO05D007908 8.2e-46 187.6 135 75.6
Ciclev10009149m.g Citrus clementina HOM05D005990 ORTHO05D007908 1.4e-45 186.8 135 75.6
PSO832G2166 Papaver somniferum HOM05D005990 ORTHO05D007908 1.4e-45 186.8 137 75.2
Migut.M01860 Erythranthe guttata HOM05D005990 ORTHO05D007908 1.8e-45 186.4 135 74.8
Nitab4.5_0000297g0120 Nicotiana tabacum HOM05D005990 ORTHO05D007908 1.8e-45 186.4 135 77.0
Nitab4.5_0008686g0040 Nicotiana tabacum HOM05D005990 ORTHO05D007908 1.8e-45 186.4 135 77.0
Solyc07g063570.4 Solanum lycopersicum HOM05D005990 ORTHO05D007908 4.1e-45 185.3 135 76.3
Sopen07g031750 Solanum pennellii HOM05D005990 ORTHO05D007908 4.1e-45 185.3 135 76.3
AagrBONN_evm.TU.Sc2ySwM_344.980 Anthoceros agrestis HOM05D005990 ORTHO05D007908 7.0e-45 184.5 135 71.9
PGSC0003DMG402019249 Solanum tuberosum HOM05D005990 ORTHO05D007908 1.2e-44 183.7 135 75.6
TWI38G1683 Tripterygium wilfordii HOM05D005990 ORTHO05D007908 1.6e-44 183.3 127 78.0
THA.LOC104811848 Tarenaya hassleriana HOM05D005990 ORTHO05D007908 2.6e-44 182.6 124 79.0
Actinidia18746 Actinidia chinensis HOM05D005990 ORTHO05D007908 2.2e-43 179.5 123 78.9
unitig_46.g18327 Utricularia gibba HOM05D005990 ORTHO05D007908 2.9e-43 179.1 134 72.4
FAN16G0288 Fragaria x ananassa HOM05D005990 ORTHO05D007908 1.1e-42 177.2 145 68.3
Cc05_g12670 Coffea canephora HOM05D005990 ORTHO05D007908 1.5e-42 176.8 140 71.4
Mapoly0093s0077 Marchantia polymorpha HOM05D005990 ORTHO05D007908 3.2e-42 175.6 119 75.6
Pp3c15_16730 Physcomitrium patens HOM05D005990 ORTHO05D007908 3.2e-42 175.6 128 73.4
Peaxi162Scf01216g00051 Petunia axillaris HOM05D005990 ORTHO05D007908 6.1e-41 171.4 124 77.4
SMO119G0067 Selaginella moellendorffii HOM05D005990 ORTHO05D007908 3.0e-40 169.1 124 72.6
Atru.chr2.2820 Acer truncatum HOM05D005990 ORTHO05D007908 9.7e-39 164.1 141 68.1
FAN21G0316 Fragaria x ananassa HOM05D005990 ORTHO05D007908 1.6e-36 156.8 148 61.5
CBR_g16976 Chara braunii HOM05D005990 ORTHO05D007908 1.0e-35 154.1 129 65.9
PRCOL_00006006 Prasinoderma coloniale HOM05D005990 ORTHO05D007908 8.8e-32 141.0 124 61.3
HPP92_027973 Vanilla planifolia HOM05D005990 ORTHO05D007908 1.2e-28 130.6 91 75.8
Cre07.g357800 Chlamydomonas reinhardtii HOM05D005990 ORTHO05D007908 2.0e-28 129.8 122 57.4
arahy.Tifrunner.gnm1.ann1.3KJ3XQ Arachis hypogaea HOM05D005990 ORTHO05D007908 8.6e-27 124.4 168 51.2
arahy.Tifrunner.gnm1.ann1.NX1DPE Arachis hypogaea HOM05D005990 ORTHO05D007908 8.6e-27 124.4 168 51.2
AagrBONN_evm.TU.Sc2ySwM_117.2025 Anthoceros agrestis HOM05D005990 ORTHO05D007908 1.0e-24 117.5 125 56.0
MBI02_g26442_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 1.8e-24 116.7 81 75.3
MCO16G378 Micromonas commoda HOM05D005990 ORTHO05D007908 3.0e-24 115.9 161 46.0
Oeu055680.2 Olea europaea HOM05D005990 ORTHO05D007908 3.0e-24 115.9 101 67.3
CAN.G162.104 Capsicum annuum HOM05D005990 ORTHO05D007908 1.5e-23 113.6 135 54.1
Hma1.2p1_1143F.1_g261070 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 2.2e-22 109.8 68 82.4
TPR.G39565 Trifolium pratense HOM05D005990 ORTHO05D007908 7.8e-20 101.3 104 57.7
BolC3t14134H Brassica oleracea HOM05D005990 ORTHO05D007908 3.8e-19 99.0 129 49.6
C03p17200 Brassica napus HOM05D005990 ORTHO05D007908 5.0e-19 98.6 129 50.4
Haze_08411 Corylus avellana HOM05D005990 ORTHO05D007908 2.4e-13 79.7 75 66.7
Solyc05g150137.1 Solanum lycopersicum HOM05D005990 ORTHO05D391672 3.2e-13 79.3 59 71.2
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 4.1e-13 79.0 56 73.2
Hma1.2p1_1302F.1_g274280 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 5.0e-11 72.0 41 87.8
Sopen10g004100 Solanum pennellii HOM05D005990 ORTHO05D000950 4.0e-08 62.4 47 70.2


User provided reference genes

Program Settings