Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00949 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 6.8e-72 273.9 135 100.0
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 2.5e-42 175.6 119 71.4
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 7.3e-42 174.1 128 64.8
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 7.3e-42 174.1 131 67.2
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 1.6e-41 172.9 132 63.6
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 2.1e-41 172.6 106 74.5
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 3.6e-41 171.8 120 67.5
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 6.2e-41 171.0 106 74.5
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 4.0e-40 168.3 130 63.8
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 4.0e-40 168.3 130 63.8
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 1.2e-39 166.8 131 63.4
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 1.5e-39 166.4 106 73.6
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 1.5e-39 166.4 130 66.9
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 2.0e-39 166.0 120 68.3
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 2.6e-39 165.6 125 62.4
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 2.6e-39 165.6 120 66.7
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 2.6e-39 165.6 114 68.4
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 2.6e-39 165.6 123 67.5
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 3.4e-39 165.2 118 70.3
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 3.4e-39 165.2 131 64.1
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 4.4e-39 164.9 103 75.7
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 4.4e-39 164.9 126 65.1
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 4.4e-39 164.9 115 67.8
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 4.4e-39 164.9 106 73.6
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 5.8e-39 164.5 106 73.6
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 5.8e-39 164.5 103 74.8
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 7.6e-39 164.1 119 66.4
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 9.9e-39 163.7 114 67.5
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 1.3e-38 163.3 117 67.5
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 1.3e-38 163.3 106 72.6
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 1.3e-38 163.3 106 72.6
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 1.7e-38 162.9 132 59.8
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 1.7e-38 162.9 106 71.7
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 2.2e-38 162.5 118 66.9
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 2.9e-38 162.2 108 69.4
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 2.9e-38 162.2 125 64.8
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 2.9e-38 162.2 124 64.5
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 2.9e-38 162.2 127 66.9
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 3.8e-38 161.8 108 70.4
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 3.8e-38 161.8 106 71.7
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 4.9e-38 161.4 125 65.6
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 4.9e-38 161.4 112 68.8
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 4.9e-38 161.4 109 68.8
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 6.4e-38 161.0 116 67.2
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 6.4e-38 161.0 112 68.8
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 8.4e-38 160.6 126 64.3
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 1.1e-37 160.2 117 67.5
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 1.1e-37 160.2 106 70.8
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 1.4e-37 159.8 121 66.9
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 1.4e-37 159.8 112 68.8
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 1.9e-37 159.5 109 70.6
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 1.9e-37 159.5 116 65.5
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 2.4e-37 159.1 103 73.8
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 2.4e-37 159.1 103 71.8
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 3.2e-37 158.7 115 67.8
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 3.2e-37 158.7 122 66.4
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 4.1e-37 158.3 117 65.8
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 5.4e-37 157.9 121 66.1
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 5.4e-37 157.9 121 66.1
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 9.2e-37 157.1 121 62.8
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 9.2e-37 157.1 122 64.8
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 9.2e-37 157.1 108 63.9
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 1.2e-36 156.8 108 70.4
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 1.6e-36 156.4 106 69.8
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 1.6e-36 156.4 106 69.8
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 1.6e-36 156.4 106 69.8
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.6e-36 156.4 121 66.1
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 1.6e-36 156.4 107 71.0
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 2.1e-36 156.0 109 69.7
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 2.7e-36 155.6 108 69.4
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 3.5e-36 155.2 101 70.3
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 4.6e-36 154.8 116 66.4
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 4.6e-36 154.8 103 71.8
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 4.6e-36 154.8 123 66.7
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 4.6e-36 154.8 123 66.7
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 4.6e-36 154.8 107 68.2
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 7.8e-36 154.1 118 64.4
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 7.8e-36 154.1 113 66.4
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 7.8e-36 154.1 112 67.0
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 1.0e-35 153.7 112 66.1
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 1.3e-35 153.3 103 69.9
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 1.7e-35 152.9 124 62.9
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 2.3e-35 152.5 132 59.1
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 3.9e-35 151.8 108 68.5
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 6.6e-35 151.0 125 59.2
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 8.6e-35 150.6 107 68.2
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 8.6e-35 150.6 108 67.6
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 1.1e-34 150.2 110 66.4
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 1.1e-34 150.2 107 68.2
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 1.1e-34 150.2 120 64.2
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 1.5e-34 149.8 116 66.4
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 1.9e-34 149.4 107 67.3
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 2.5e-34 149.1 107 67.3
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 3.3e-34 148.7 110 66.4
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 4.3e-34 148.3 108 66.7
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 5.6e-34 147.9 114 64.9
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 9.6e-34 147.1 103 68.0
Gohir.A10G083732 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.6e-33 146.4 107 65.4
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 2.1e-33 146.0 103 68.0
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 2.1e-33 146.0 110 65.5
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 4.7e-33 144.8 106 63.2
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 6.2e-33 144.4 96 72.9
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 1.8e-32 142.9 109 65.1
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 3.1e-32 142.1 86 76.7
Cpa.g.sc109.47 Carica papaya HOM05D002908 ORTHO05D007390 5.2e-32 141.4 80 83.8
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 6.9e-32 141.0 77 87.0
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 1.5e-31 139.8 82 79.3
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 1.4e-29 133.3 117 56.4
Rhsim02G0192800 Rhododendron simsii HOM05D002908 ORTHO05D004240 8.4e-22 107.5 80 66.2
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 4.6e-20 101.7 136 45.6
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 2.9e-14 82.4 40 90.0
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 2.9e-14 82.4 40 90.0
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 2.9e-14 82.4 40 90.0
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 1.1e-13 80.5 80 50.0
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 1.9e-13 79.7 84 44.0
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 5.5e-13 78.2 40 85.0
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 9.3e-13 77.4 40 85.0
Cre17.g698800 Chlamydomonas reinhardtii HOM05D002908 ORTHO05D007390 1.8e-11 73.2 132 34.1
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 4.8e-09 65.1 83 48.2
Nn3g18125 Nelumbo nucifera HOM05D002908 ORTHO05D007390 1.3e-06 57.0 41 65.9
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 6.5e-06 54.7 40 67.5


User provided reference genes

Program Settings