Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00858 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 1.3e-59 233.0 129 100.0
Mapoly0065s0027 Marchantia polymorpha HOM05D004799 ORTHO05D005500 1.5e-15 86.7 84 59.5
Dinv19352 Davidia involucrata HOM05D004799 ORTHO05D005500 1.7e-11 73.2 120 40.8
FAN04G2475 Fragaria x ananassa HOM05D004799 ORTHO05D005500 3.7e-11 72.0 124 44.4
FAN13G3307 Fragaria x ananassa HOM05D004799 ORTHO05D005500 3.7e-11 72.0 124 43.5
Sabra01G0161300 Salix brachista HOM05D004799 ORTHO05D005500 4.9e-11 71.6 133 42.9
Sopen01g046960 Solanum pennellii HOM05D004799 ORTHO05D005500 4.9e-11 71.6 123 42.3
GSVIVG01023017001 Vitis vinifera HOM05D004799 ORTHO05D005500 6.4e-11 71.2 126 41.3
Ciclev10002345m.g Citrus clementina HOM05D004799 ORTHO05D005500 8.3e-11 70.9 130 40.8
Hma1.2p1_0217F.1_g091930 Hydrangea macrophylla HOM05D004799 ORTHO05D005500 1.1e-10 70.5 120 41.7
MBI03_g11127_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 1.1e-10 70.5 133 41.4
Lj6g0003329 Lotus japonicus HOM05D004799 ORTHO05D005500 1.4e-10 70.1 100 46.0
FvH4_5g30080 Fragaria vesca HOM05D004799 ORTHO05D005500 1.9e-10 69.7 124 43.5
FAN18G4597 Fragaria x ananassa HOM05D004799 ORTHO05D005500 1.9e-10 69.7 124 43.5
MBI03_g11149_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 2.4e-10 69.3 131 42.0
PGSC0003DMG400023776 Solanum tuberosum HOM05D004799 ORTHO05D005500 2.4e-10 69.3 123 40.7
Haze_01626 Corylus avellana HOM05D004799 ORTHO05D005500 3.2e-10 68.9 122 41.0
Peaxi162Scf00011g00139 Petunia axillaris HOM05D004799 ORTHO05D005500 4.1e-10 68.6 122 38.5
RcHm_v2.0_Chr7g0224271 Rosa chinensis HOM05D004799 ORTHO05D005500 5.4e-10 68.2 124 43.5
SGA_v2.0_scaffold110G31288 Striga asiatica HOM05D004799 ORTHO05D005500 5.4e-10 68.2 120 41.7
Carub.0001s1103 Capsella rubella HOM05D004799 ORTHO05D005500 7.0e-10 67.8 124 37.9
MELO3C018586.2 Cucumis melo HOM05D004799 ORTHO05D005500 7.0e-10 67.8 126 42.1
CsaV3_7G007080 Cucumis sativus L. HOM05D004799 ORTHO05D005500 7.0e-10 67.8 126 42.1
MD08G1225100 Malus domestica HOM05D004799 ORTHO05D005500 7.0e-10 67.8 122 41.0
MD15G1418700 Malus domestica HOM05D004799 ORTHO05D005500 7.0e-10 67.8 123 43.1
Manes.10G132000 Manihot esculenta HOM05D004799 ORTHO05D005500 9.2e-10 67.4 132 37.9
Nn1g08619 Nelumbo nucifera HOM05D004799 ORTHO05D005500 9.2e-10 67.4 107 43.0
Rhsim11G0131600 Rhododendron simsii HOM05D004799 ORTHO05D005500 1.6e-09 66.6 123 39.0
TAR628G0692 Trochodendron aralioides HOM05D004799 ORTHO05D005500 1.6e-09 66.6 117 39.3
Lsat_1_v5_gn_9_116381 Lactuca sativa HOM05D004799 ORTHO05D005500 2.0e-09 66.2 127 39.4
Potri.001G209100 Populus trichocarpa HOM05D004799 ORTHO05D005500 2.0e-09 66.2 124 40.3
Potri.003G021500 Populus trichocarpa HOM05D004799 ORTHO05D005500 2.7e-09 65.9 118 43.2
Cfa005544 Carpinus fangiana HOM05D004799 ORTHO05D005500 3.5e-09 65.5 122 40.2
AL1G22490 Arabidopsis lyrata HOM05D004799 ORTHO05D005500 4.6e-09 65.1 113 41.6
CiPaw.05G042800 Carya illinoinensis HOM05D004799 ORTHO05D005500 4.6e-09 65.1 125 41.6
AT1G11400 Arabidopsis thaliana HOM05D004799 ORTHO05D005500 6.0e-09 64.7 106 40.6
CARHR011640 Cardamine hirsuta HOM05D004799 ORTHO05D005500 6.0e-09 64.7 117 39.3
HanXRQChr03g0066881 Helianthus annuus HOM05D004799 ORTHO05D005500 6.0e-09 64.7 118 41.5
Aqoxy6G00151 Aquilegia oxysepala HOM05D004799 ORTHO05D005500 7.8e-09 64.3 119 42.9
TPR.G2141 Trifolium pratense HOM05D004799 ORTHO05D005500 7.8e-09 64.3 118 40.7
Eucgr.I02711 Eucalyptus grandis HOM05D004799 ORTHO05D005500 1.0e-08 63.9 125 41.6
Migut.B00668 Erythranthe guttata HOM05D004799 ORTHO05D005500 1.3e-08 63.5 92 45.7
Lj5A248T74 Lonicera japonica HOM05D004799 ORTHO05D005500 1.3e-08 63.5 120 40.8
Actinidia00218 Actinidia chinensis HOM05D004799 ORTHO05D005500 1.7e-08 63.2 119 38.7
ClCG09G016220 Citrullus lanatus HOM05D004799 ORTHO05D005500 2.3e-08 62.8 127 39.4
Psat1g220000 Pisum sativum HOM05D004799 ORTHO05D005500 2.3e-08 62.8 112 42.0
Atru.chr6.1045 Acer truncatum HOM05D004799 ORTHO05D005500 3.0e-08 62.4 125 36.0
CsaV3_5G024750 Cucumis sativus L. HOM05D004799 ORTHO05D005500 3.0e-08 62.4 125 40.8
Cpa.g.sc2.26 Carica papaya HOM05D004799 ORTHO05D005500 3.9e-08 62.0 131 38.9
Cc02_g22290 Coffea canephora HOM05D004799 ORTHO05D005500 3.9e-08 62.0 122 38.5
Medtr2g007770 Medicago truncatula HOM05D004799 ORTHO05D005500 3.9e-08 62.0 127 37.0
Prupe.1G562800 Prunus persica HOM05D004799 ORTHO05D005500 3.9e-08 62.0 121 37.2
Gohir.A03G210900 Gossypium hirsutum HOM05D004799 ORTHO05D005500 5.0e-08 61.6 126 40.5
vmacro01776 Vaccinium macrocarpon HOM05D004799 ORTHO05D005500 5.0e-08 61.6 127 38.6
Oeu012743.2 Olea europaea HOM05D004799 ORTHO05D005500 6.6e-08 61.2 120 36.7
ATR0684G092 Amborella trichopoda HOM05D004799 ORTHO05D005500 8.6e-08 60.8 135 36.3
Lalb_Chr07g0185691 Lupinus albus HOM05D004799 ORTHO05D005500 8.6e-08 60.8 127 40.9
ECA240G2283 Erigeron canadensis HOM05D004799 ORTHO05D005500 1.1e-07 60.5 126 37.3
BcaC05g25015 Brassica carinata HOM05D004799 ORTHO05D005500 1.5e-07 60.1 117 39.3
C05p09620 Brassica napus HOM05D004799 ORTHO05D005500 1.5e-07 60.1 117 39.3
BolC5t29704H Brassica oleracea HOM05D004799 ORTHO05D005500 1.5e-07 60.1 117 39.3
CiPaw.06G148900 Carya illinoinensis HOM05D004799 ORTHO05D005500 1.5e-07 60.1 125 40.8
SalBow6G1776 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.5e-07 60.1 98 40.8
SalBow6G5744 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.5e-07 60.1 98 40.8
THA.LOC104809537 Tarenaya hassleriana HOM05D004799 ORTHO05D005500 1.5e-07 60.1 120 37.5
Aa31LG1G3310 Aethionema arabicum HOM05D004799 ORTHO05D005500 1.9e-07 59.7 126 35.7
Oeu008877.2 Olea europaea HOM05D004799 ORTHO05D005500 1.9e-07 59.7 123 35.8
Sabra03G0013400 Salix brachista HOM05D004799 ORTHO05D005500 2.5e-07 59.3 124 40.3
MSTRG.27841 Avicennia marina HOM05D004799 ORTHO05D005500 4.3e-07 58.5 121 39.7
BcaC07g38663 Brassica carinata HOM05D004799 ORTHO05D005500 7.3e-07 57.8 117 41.9
C08p14470 Brassica napus HOM05D004799 ORTHO05D005500 7.3e-07 57.8 117 41.9
BolC8t49096H Brassica oleracea HOM05D004799 ORTHO05D005500 7.3e-07 57.8 117 41.9
A06p08020 Brassica napus HOM05D004799 ORTHO05D005500 9.5e-07 57.4 121 38.0
BraA06t24001Z Brassica rapa HOM05D004799 ORTHO05D005500 9.5e-07 57.4 121 38.0
Phvul.002G251000 Phaseolus vulgaris HOM05D004799 ORTHO05D005500 1.2e-06 57.0 97 39.2
Sp1g10030 Schrenkiella parvula HOM05D004799 ORTHO05D005500 1.2e-06 57.0 125 39.2
Dinv24262 Davidia involucrata HOM05D004799 ORTHO05D005500 2.1e-06 56.2 121 35.5
Sc14g0006850 Simmondsia chinensis HOM05D004799 ORTHO05D005500 2.1e-06 56.2 128 35.2
TWI59G1038 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 2.1e-06 56.2 130 36.9
arahy.Tifrunner.gnm1.ann1.BG3XJE Arachis hypogaea HOM05D004799 ORTHO05D005500 2.8e-06 55.8 122 41.0
A08p33480 Brassica napus HOM05D004799 ORTHO05D005500 2.8e-06 55.8 113 40.7
AUR62018552 Chenopodium quinoa HOM05D004799 ORTHO05D005500 2.8e-06 55.8 97 38.1
COL.COLO4_17895 Corchorus olitorius HOM05D004799 ORTHO05D005500 2.8e-06 55.8 126 36.5
Gohir.A01G177000 Gossypium hirsutum HOM05D004799 ORTHO05D005500 2.8e-06 55.8 123 35.8
arahy.Tifrunner.gnm1.ann1.ZS42GJ Arachis hypogaea HOM05D004799 ORTHO05D005500 3.6e-06 55.5 122 40.2
CANSAT11G1940 Cannabis sativa HOM05D004799 ORTHO05D005500 3.6e-06 55.5 127 32.3
Thhalv10008698m.g Eutrema salsugineum HOM05D004799 ORTHO05D005500 3.6e-06 55.5 128 36.7
TWI23G0644 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 3.6e-06 55.5 112 37.5
VMungo0251G3647 Vigna mungo HOM05D004799 ORTHO05D005500 3.6e-06 55.5 101 40.6
Gorai.005G260300 Gossypium raimondii HOM05D004799 ORTHO05D005500 6.2e-06 54.7 119 41.2
CAN.G1352.25 Capsicum annuum HOM05D004799 ORTHO05D005500 8.1e-06 54.3 123 34.1
Manes.07G013800 Manihot esculenta HOM05D004799 ORTHO05D005500 8.1e-06 54.3 122 36.9
QL02p098623 Quercus lobata HOM05D004799 ORTHO05D005500 8.1e-06 54.3 150 36.0
Sed0004816 Sechium edule HOM05D004799 ORTHO05D005500 8.1e-06 54.3 115 33.9


User provided reference genes

Program Settings