Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00721 Sequoiadendron giganteum HOM05D008044 ORTHO05D010106 4.8e-102 374.4 176 100.0
Medtr3g092020 Medicago truncatula HOM05D008044 ORTHO05D010106 1.8e-48 196.4 177 54.2
TPR.G33642 Trifolium pratense HOM05D008044 ORTHO05D010106 1.5e-47 193.4 176 51.7
Glyma.04G232600 Glycine max HOM05D008044 ORTHO05D010106 7.5e-47 191.0 176 51.7
Dinv35361 Davidia involucrata HOM05D008044 ORTHO05D010106 3.7e-46 188.7 176 51.1
Lj1g0025539 Lotus japonicus HOM05D008044 ORTHO05D010106 3.7e-46 188.7 176 51.1
Manes.01G037300 Manihot esculenta HOM05D008044 ORTHO05D010106 6.4e-46 188.0 174 51.7
Psat5g074880 Pisum sativum HOM05D008044 ORTHO05D010106 1.4e-45 186.8 176 52.8
arahy.Tifrunner.gnm1.ann1.QU8WMY Arachis hypogaea HOM05D008044 ORTHO05D010106 2.4e-45 186.0 176 51.7
Glyma.06G132400 Glycine max HOM05D008044 ORTHO05D010106 7.0e-45 184.5 176 52.3
Dinv29244 Davidia involucrata HOM05D008044 ORTHO05D010106 9.2e-45 184.1 176 51.7
arahy.Tifrunner.gnm1.ann1.4AVA7A Arachis hypogaea HOM05D008044 ORTHO05D010106 3.5e-44 182.2 176 50.6
Sed0010771 Sechium edule HOM05D008044 ORTHO05D010106 4.6e-44 181.8 176 52.3
Lalb_Chr23g0271711 Lupinus albus HOM05D008044 ORTHO05D010106 7.8e-44 181.0 177 50.8
CiPaw.06G043900 Carya illinoinensis HOM05D008044 ORTHO05D010106 3.0e-43 179.1 176 50.0
CsaV3_3G019660 Cucumis sativus L. HOM05D008044 ORTHO05D010106 3.0e-43 179.1 176 51.1
MELO3C019381.2 Cucumis melo HOM05D008044 ORTHO05D010106 6.6e-43 177.9 176 51.7
DCAR_020347 Daucus carota HOM05D008044 ORTHO05D010106 6.6e-43 177.9 176 49.4
Eucgr.A01433 Eucalyptus grandis HOM05D008044 ORTHO05D010106 1.1e-42 177.2 175 51.4
Duzib205G1586 Durio zibethinus HOM05D008044 ORTHO05D010106 1.5e-42 176.8 178 50.0
AUR62035573 Chenopodium quinoa HOM05D008044 ORTHO05D010106 1.9e-42 176.4 176 48.3
Gohir.A03G051500 Gossypium hirsutum HOM05D008044 ORTHO05D010106 1.9e-42 176.4 178 50.0
Gorai.003G122500 Gossypium raimondii HOM05D008044 ORTHO05D010106 1.9e-42 176.4 178 50.0
Thecc.03G204500 Theobroma cacao HOM05D008044 ORTHO05D010106 1.9e-42 176.4 177 50.3
Gohir.D03G116200 Gossypium hirsutum HOM05D008044 ORTHO05D010106 2.5e-42 176.0 178 50.0
SGA_v2.0_scaffold44G16829 Striga asiatica HOM05D008044 ORTHO05D010106 7.3e-42 174.5 176 48.9
GSVIVG01038604001 Vitis vinifera HOM05D008044 ORTHO05D010106 9.5e-42 174.1 177 50.8
Phvul.009G048200 Phaseolus vulgaris HOM05D008044 ORTHO05D010106 1.2e-41 173.7 173 49.1
PGSC0003DMG400018537 Solanum tuberosum HOM05D008044 ORTHO05D010106 1.2e-41 173.7 176 48.9
PSO063G1947 Papaver somniferum HOM05D008044 ORTHO05D010106 1.6e-41 173.3 178 48.9
TAR636G0016 Trochodendron aralioides HOM05D008044 ORTHO05D010106 2.1e-41 172.9 177 49.7
QL09p007646 Quercus lobata HOM05D008044 ORTHO05D010106 2.8e-41 172.6 207 44.4
Atru.chr12.2313 Acer truncatum HOM05D008044 ORTHO05D010106 4.7e-41 171.8 179 49.7
MSTRG.8632 Avicennia marina HOM05D008044 ORTHO05D010106 6.2e-41 171.4 176 48.9
CSS0007407 Camellia sinensis var. sinensis HOM05D008044 ORTHO05D010106 6.2e-41 171.4 178 48.9
CAN.G481.61 Capsicum annuum HOM05D008044 ORTHO05D010106 1.4e-40 170.2 176 48.9
ATR0620G028 Amborella trichopoda HOM05D008044 ORTHO05D010106 2.3e-40 169.5 173 50.9
Ciclev10022664m.g Citrus clementina HOM05D008044 ORTHO05D010106 3.1e-40 169.1 176 50.0
Sabra15G0006200 Salix brachista HOM05D002361 ORTHO05D002843 4.0e-40 168.7 174 50.0
Cc02_g01150 Coffea canephora HOM05D008044 ORTHO05D010106 8.9e-40 167.5 178 50.0
AUR62006056 Chenopodium quinoa HOM05D008044 ORTHO05D010106 1.5e-39 166.8 176 44.9
Solyc03g082670.3 Solanum lycopersicum HOM05D008044 ORTHO05D010106 1.5e-39 166.8 176 47.2
Migut.F00176 Erythranthe guttata HOM05D008044 ORTHO05D010106 2.0e-39 166.4 176 47.2
Nitab4.5_0008197g0010 Nicotiana tabacum HOM05D008044 ORTHO05D010106 3.4e-39 165.6 176 47.2
Aqoxy5G02418 Aquilegia oxysepala HOM05D008044 ORTHO05D010106 4.4e-39 165.2 176 48.3
Sc25g0000980 Simmondsia chinensis HOM05D008044 ORTHO05D010106 7.5e-39 164.5 177 46.3
Lsat_1_v5_gn_2_135221 Lactuca sativa HOM05D008044 ORTHO05D010106 2.9e-38 162.5 177 45.2
Cfa016194 Carpinus fangiana HOM05D008044 ORTHO05D010106 1.9e-37 159.8 176 47.2
MBI04_g11918_MAGBIO Magnolia biondii HOM05D008044 ORTHO05D010106 1.6e-36 156.8 200 46.5
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 2.1e-36 156.4 178 45.5
PGR042G2636 Punica granatum HOM05D008044 ORTHO05D010106 2.7e-36 156.0 179 47.5
CiPaw.05G200900 Carya illinoinensis HOM05D008044 ORTHO05D010106 7.8e-36 154.5 176 46.0
HanXRQChr04g0100441 Helianthus annuus HOM05D008044 ORTHO05D010106 1.0e-35 154.1 177 44.6
PSO782G0454 Papaver somniferum HOM05D008044 ORTHO05D010106 2.3e-35 152.9 111 61.3
SGA_v2.0_scaffold18G08440 Striga asiatica HOM05D008044 ORTHO05D010106 3.0e-35 152.5 178 46.6
CANSAT21G1192 Cannabis sativa HOM05D008044 ORTHO05D010106 6.6e-35 151.4 176 44.9
Oeu037043.1 Olea europaea HOM05D001626 ORTHO05D010106 1.1e-34 150.6 171 44.4
Zm00001eb187590 Zea mays HOM05D008044 ORTHO05D010106 1.5e-34 150.2 172 43.6
SalBow4G0010 Salvia bowleyana HOM05D008044 ORTHO05D010106 8.1e-33 144.4 182 41.2
Ca_16735_v3 Cicer arietinum L. HOM05D008044 ORTHO05D010106 2.0e-31 139.8 142 50.0
ClCG05G009120 Citrullus lanatus HOM05D008044 ORTHO05D010106 2.0e-31 139.8 151 46.4
Nitab4.5_0010367g0020 Nicotiana tabacum HOM05D008044 ORTHO05D010106 7.6e-31 137.9 151 46.4
EL10Ac3g05235 Beta vulgaris HOM05D008044 ORTHO05D010106 2.2e-30 136.3 156 44.2
Actinidia08675 Actinidia chinensis HOM05D008044 ORTHO05D010106 4.9e-30 135.2 145 46.9
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 1.2e-28 130.6 149 43.6
Haze_00261 Corylus avellana HOM05D008044 ORTHO05D010106 1.6e-28 130.2 148 47.3
Hma1.2p1_0512F.1_g169310 Hydrangea macrophylla HOM05D008044 ORTHO05D010106 4.6e-28 128.6 144 47.2
Sopen03g022430 Solanum pennellii HOM05D008044 ORTHO05D010106 1.0e-27 127.5 142 45.1
Ah.07g205140 Amaranthus hybridus HOM05D008044 ORTHO05D010106 5.1e-27 125.2 176 42.0
AagrBONN_evm.TU.Sc2ySwM_117.1515 Anthoceros agrestis HOM05D008044 ORTHO05D010106 3.3e-26 122.5 190 35.8
Mapoly0007s0051 Marchantia polymorpha HOM05D008044 ORTHO05D010106 2.8e-25 119.4 179 36.9
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 1.4e-24 117.1 94 54.3
Peaxi162Scf00740g00427 Petunia axillaris HOM05D008044 ORTHO05D010106 2.4e-24 116.3 176 36.4
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 2.2e-22 109.8 79 59.5
CDE02G3408 Ceratophyllum demersum HOM05D008044 ORTHO05D010106 2.4e-21 106.3 105 47.6
Os02g0686500 Oryza sativa ssp. japonica HOM05D008044 ORTHO05D010106 3.2e-21 105.9 79 59.5
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 9.3e-21 104.4 148 40.5
Nn1g00365 Nelumbo nucifera HOM05D008044 ORTHO05D010106 4.9e-14 82.0 98 46.9
Lsat_1_v5_gn_9_14140 Lactuca sativa HOM05D008044 ORTHO05D010106 7.9e-12 74.7 160 30.0
ECA238G1983 Erigeron canadensis HOM05D008044 ORTHO05D010106 2.1e-09 66.6 96 37.5
DCAR_000721 Daucus carota HOM05D005374 ORTHO05D006534 2.2e-06 56.6 96 31.2
ATR0568G167 Amborella trichopoda HOM05D005374 ORTHO05D006534 2.9e-06 56.2 96 36.5
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 3.8e-06 55.8 93 34.4
Mapoly0004s0051 Marchantia polymorpha HOM05D005374 ORTHO05D006534 6.4e-06 55.1 94 31.9
Hma1.2p1_1841F.1_g304960 Hydrangea macrophylla HOM05D005374 ORTHO05D006534 8.4e-06 54.7 95 33.7
SalBow8G5130 Salvia bowleyana HOM05D005374 ORTHO05D006534 8.4e-06 54.7 96 35.4


User provided reference genes

Program Settings