Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00594 Sequoiadendron giganteum HOM05D005309 ORTHO05D006648 8.5e-41 169.9 83 100.0
COL.COLO4_08888 Corchorus olitorius HOM05D005309 ORTHO05D006648 2.5e-32 141.7 82 79.3
Cpa.g.sc50.107 Carica papaya HOM05D005309 ORTHO05D006648 7.2e-32 140.2 82 79.3
Thecc.01G169500 Theobroma cacao HOM05D005309 ORTHO05D006648 9.4e-32 139.8 82 78.0
GSVIVG01020840001 Vitis vinifera HOM05D005309 ORTHO05D006648 9.4e-32 139.8 82 76.8
Atru.chr6.2050 Acer truncatum HOM05D005309 ORTHO05D006648 2.7e-31 138.3 82 78.0
CiPaw.04G138100 Carya illinoinensis HOM05D005309 ORTHO05D006648 2.7e-31 138.3 82 76.8
Gohir.A11G157100 Gossypium hirsutum HOM05D005309 ORTHO05D006648 2.7e-31 138.3 82 76.8
Gohir.D11G164100 Gossypium hirsutum HOM05D005309 ORTHO05D006648 2.7e-31 138.3 82 76.8
Gorai.007G174900 Gossypium raimondii HOM05D005309 ORTHO05D006648 2.7e-31 138.3 82 76.8
Ciclev10031016m.g Citrus clementina HOM05D005309 ORTHO05D006648 4.7e-31 137.5 82 78.0
Eucgr.K01225 Eucalyptus grandis HOM05D005309 ORTHO05D006648 6.1e-31 137.1 82 76.8
SGA_v2.0_scaffold73G24489 Striga asiatica HOM05D005309 ORTHO05D006648 6.1e-31 137.1 82 75.6
MELO3C022960.2 Cucumis melo HOM05D005309 ORTHO05D006648 7.9e-31 136.7 82 78.0
Oeu029978.1 Olea europaea HOM05D005309 ORTHO05D006648 7.9e-31 136.7 82 75.6
PGR142G1004 Punica granatum HOM05D005309 ORTHO05D006648 7.9e-31 136.7 82 76.8
Duzib133G0867 Durio zibethinus HOM05D005309 ORTHO05D006648 1.0e-30 136.3 82 75.6
Nitab4.5_0001552g0030 Nicotiana tabacum HOM05D005309 ORTHO05D006648 1.0e-30 136.3 83 74.7
TAR627G0108 Trochodendron aralioides HOM05D005309 ORTHO05D006648 1.4e-30 136.0 82 75.6
CsaV3_4G031990 Cucumis sativus L. HOM05D005309 ORTHO05D006648 1.8e-30 135.6 81 76.5
RcHm_v2.0_Chr2g0152091 Rosa chinensis HOM05D005309 ORTHO05D006648 1.8e-30 135.6 81 74.1
VMungo0647G1913 Vigna mungo HOM05D005309 ORTHO05D006648 1.8e-30 135.6 81 76.5
CAN.G275.11 Capsicum annuum HOM05D005309 ORTHO05D006648 2.3e-30 135.2 82 73.2
Cc05_g01700 Coffea canephora HOM05D005309 ORTHO05D006648 2.3e-30 135.2 82 76.8
FvH4_6g38630 Fragaria vesca HOM05D005309 ORTHO05D006648 2.3e-30 135.2 81 74.1
FAN14G4003 Fragaria x ananassa HOM05D005309 ORTHO05D006648 2.3e-30 135.2 81 74.1
Peaxi162Scf00359g00710 Petunia axillaris HOM05D005309 ORTHO05D006648 2.3e-30 135.2 82 73.2
THA.LOC104826242 Tarenaya hassleriana HOM05D005309 ORTHO05D006648 2.3e-30 135.2 82 76.8
MSTRG.14909 Avicennia marina HOM05D005309 ORTHO05D006648 3.0e-30 134.8 82 75.6
Manes.02G208560 Manihot esculenta HOM05D005309 ORTHO05D006648 3.0e-30 134.8 82 75.6
arahy.Tifrunner.gnm1.ann1.9TU2QX Arachis hypogaea HOM05D005309 ORTHO05D006648 3.9e-30 134.4 81 76.5
arahy.Tifrunner.gnm1.ann1.JRP0UJ Arachis hypogaea HOM05D005309 ORTHO05D006648 3.9e-30 134.4 81 76.5
Cfa023077 Carpinus fangiana HOM05D005309 ORTHO05D006648 3.9e-30 134.4 82 74.4
ECA234G1968 Erigeron canadensis HOM05D005309 ORTHO05D006648 3.9e-30 134.4 82 75.6
FAN05G5670 Fragaria x ananassa HOM05D005309 ORTHO05D006648 3.9e-30 134.4 81 74.1
CDE02G3568 Ceratophyllum demersum HOM05D005309 ORTHO05D006648 5.1e-30 134.0 81 76.5
ClCG11G016530 Citrullus lanatus HOM05D005309 ORTHO05D006648 5.1e-30 134.0 81 75.3
Glyma.14G030100 Glycine max HOM05D005309 ORTHO05D006648 5.1e-30 134.0 81 76.5
Phvul.008G194100 Phaseolus vulgaris HOM05D005309 ORTHO05D006648 5.1e-30 134.0 81 76.5
Lsat_1_v5_gn_4_26360 Lactuca sativa HOM05D005309 ORTHO05D006648 6.7e-30 133.7 82 74.4
Medtr5g091110 Medicago truncatula HOM05D005309 ORTHO05D006648 6.7e-30 133.7 81 76.5
Zm00001eb170650 Zea mays HOM05D005309 ORTHO05D006648 6.7e-30 133.7 82 75.6
FAN02G0734 Fragaria x ananassa HOM05D005309 ORTHO05D006648 8.8e-30 133.3 81 72.8
CANSAT64G0469 Cannabis sativa HOM05D005309 ORTHO05D006648 1.5e-29 132.5 82 73.2
Ah.10g035950 Amaranthus hybridus HOM05D005309 ORTHO05D006648 2.0e-29 132.1 81 75.3
EL10Ac2g04244 Beta vulgaris HOM05D005309 ORTHO05D006648 2.0e-29 132.1 81 75.3
Dinv18821 Davidia involucrata HOM05D005309 ORTHO05D006648 2.0e-29 132.1 82 74.4
Nn3g20733 Nelumbo nucifera HOM05D005309 ORTHO05D006648 2.0e-29 132.1 82 73.2
Prupe.3G177300 Prunus persica HOM05D005309 ORTHO05D006648 2.0e-29 132.1 81 75.3
TWI23G0800 Tripterygium wilfordii HOM05D005309 ORTHO05D006648 2.0e-29 132.1 82 73.2
MD17G1135100 Malus domestica HOM05D005309 ORTHO05D006648 2.6e-29 131.7 81 72.8
PSO384G0241 Papaver somniferum HOM05D005309 ORTHO05D006648 2.6e-29 131.7 82 70.7
Sabra05G0155700 Salix brachista HOM05D005309 ORTHO05D006648 2.6e-29 131.7 82 73.2
Solyc07g045070.3 Solanum lycopersicum HOM05D005309 ORTHO05D006648 2.6e-29 131.7 82 72.0
Sopen07g023630 Solanum pennellii HOM05D005309 ORTHO05D006648 2.6e-29 131.7 82 72.0
LjContig00049g0017299 Lotus japonicus HOM05D005309 ORTHO05D006648 3.3e-29 131.3 81 72.8
Nitab4.5_0005142g0020 Nicotiana tabacum HOM05D005309 ORTHO05D006648 3.3e-29 131.3 82 72.0
Ca_06266_v3 Cicer arietinum L. HOM05D005309 ORTHO05D006648 4.4e-29 131.0 81 74.1
FAN09G0570 Fragaria x ananassa HOM05D005309 ORTHO05D006648 4.4e-29 131.0 81 71.6
HanXRQChr01g0028511 Helianthus annuus HOM05D005309 ORTHO05D006648 4.4e-29 131.0 82 74.4
Psat2g017040 Pisum sativum HOM05D005309 ORTHO05D006648 5.7e-29 130.6 81 74.1
Lalb_Chr04g0248901 Lupinus albus HOM05D005309 ORTHO05D006648 7.4e-29 130.2 82 73.2
Os08g0365900 Oryza sativa ssp. japonica HOM05D005309 ORTHO05D006648 7.4e-29 130.2 82 74.4
Hund02144 Selenicereus undatus HOM05D005309 ORTHO05D006648 7.4e-29 130.2 81 75.3
Hma1.2p1_0147F.1_g065840 Hydrangea macrophylla HOM05D005309 ORTHO05D006648 9.7e-29 129.8 81 75.3
TPR.G10159 Trifolium pratense HOM05D005309 ORTHO05D006648 1.3e-28 129.4 81 74.1
Aqoxy4G00092 Aquilegia oxysepala HOM05D005309 ORTHO05D006648 1.7e-28 129.0 82 69.5
Lj1A593G32 Lonicera japonica HOM05D005309 ORTHO05D006648 1.7e-28 129.0 82 75.6
Potri.005G204900 Populus trichocarpa HOM05D005309 ORTHO05D006648 3.7e-28 127.9 82 70.7
Rhsim12G0010200 Rhododendron simsii HOM05D005309 ORTHO05D006648 4.8e-28 127.5 80 75.0
HPP92_023436 Vanilla planifolia HOM05D005309 ORTHO05D006648 4.8e-28 127.5 82 73.2
unitig_899.g15343 Utricularia gibba HOM05D005309 ORTHO05D006648 1.1e-27 126.3 82 70.7
Actinidia11207 Actinidia chinensis HOM05D005309 ORTHO05D006648 1.4e-27 125.9 81 71.6
Sc09g0008320 Simmondsia chinensis HOM05D005309 ORTHO05D006648 1.8e-27 125.6 82 70.7
Migut.M00059 Erythranthe guttata HOM05D005309 ORTHO05D006648 2.4e-27 125.2 82 69.5
Aa31LG1G7660 Aethionema arabicum HOM05D005309 ORTHO05D006648 4.1e-27 124.4 82 73.2
AagrBONN_evm.TU.Sc2ySwM_362.1083 Anthoceros agrestis HOM05D005309 ORTHO05D006648 4.1e-27 124.4 82 70.7
AUR62012368 Chenopodium quinoa HOM05D005309 ORTHO05D006648 5.3e-27 124.0 81 70.4
CSS0009662 Camellia sinensis var. sinensis HOM05D005309 ORTHO05D006648 7.0e-27 123.6 81 67.9
CSS0016258 Camellia sinensis var. sinensis HOM05D005309 ORTHO05D006648 9.1e-27 123.2 81 67.9
BcaNung07076 Brassica carinata HOM05D005309 ORTHO05D006648 1.2e-26 122.9 82 72.0
C05p04800 Brassica napus HOM05D005309 ORTHO05D006648 1.2e-26 122.9 82 72.0
BolC5t29253H Brassica oleracea HOM05D005309 ORTHO05D006648 1.2e-26 122.9 82 72.0
A10p05200 Brassica napus HOM05D005309 ORTHO05D006648 1.6e-26 122.5 82 72.0
Sp1g05320 Schrenkiella parvula HOM05D005309 ORTHO05D006648 2.0e-26 122.1 82 73.2
Thhalv10007146m.g Eutrema salsugineum HOM05D005309 ORTHO05D006648 2.6e-26 121.7 82 73.2
A08p35920 Brassica napus HOM05D005309 ORTHO05D006648 5.9e-26 120.6 82 72.0
SalBow7G0619 Salvia bowleyana HOM05D005309 ORTHO05D006648 1.3e-25 119.4 84 66.7
BcaC07g36798 Brassica carinata HOM05D005309 ORTHO05D006648 2.2e-25 118.6 82 70.7
C08p02650 Brassica napus HOM05D005309 ORTHO05D006648 2.2e-25 118.6 82 70.7
BolC8t47061H Brassica oleracea HOM05D005309 ORTHO05D006648 2.2e-25 118.6 82 70.7
Carub.0001s0593 Capsella rubella HOM05D005309 ORTHO05D006648 2.2e-25 118.6 82 72.0
DCAR_016942 Daucus carota HOM05D005309 ORTHO05D006648 2.2e-25 118.6 82 68.3
SMO111G0017 Selaginella moellendorffii HOM05D005309 ORTHO05D006648 5.0e-25 117.5 83 67.5
CARHR006170 Cardamine hirsuta HOM05D005309 ORTHO05D006648 6.5e-25 117.1 82 70.7
AL1G16590 Arabidopsis lyrata HOM05D005309 ORTHO05D006648 8.5e-25 116.7 82 70.7
AT1G06560 Arabidopsis thaliana HOM05D005309 ORTHO05D006648 8.5e-25 116.7 82 70.7
SMO293G0021 Selaginella moellendorffii HOM05D005309 ORTHO05D006648 1.1e-24 116.3 82 67.1
BraA08t35499Z Brassica rapa HOM05D005309 ORTHO05D006648 9.4e-24 113.2 82 68.3
BraA10t42787Z Brassica rapa HOM05D005309 ORTHO05D006648 1.2e-23 112.8 71 74.6
Mapoly0025s0011 Marchantia polymorpha HOM05D005309 ORTHO05D006648 1.8e-22 109.0 67 74.6
BcaB02g06781 Brassica carinata HOM05D005309 ORTHO05D006648 9.7e-21 103.2 63 76.2
Pp3c12_23090 Physcomitrium patens HOM05D005309 ORTHO05D006648 9.7e-21 103.2 63 74.6
CBR_g38934 Chara braunii HOM05D005309 ORTHO05D006648 1.7e-20 102.4 83 60.2
vmacro08735 Vaccinium macrocarpon HOM05D005309 ORTHO05D006648 4.8e-20 100.9 141 42.6
QL11p000196 Quercus lobata HOM05D005309 ORTHO05D006648 7.7e-18 93.6 168 36.3
PSO339G5406 Papaver somniferum HOM05D005309 ORTHO05D006648 2.3e-14 82.0 52 71.2
Lsat_1_v5_gn_4_120101 Lactuca sativa HOM05D005309 ORTHO05D006648 4.0e-14 81.3 44 79.5
SHI03272 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-10 69.3 45 71.1
Cre13.g606200 Chlamydomonas reinhardtii HOM05D005309 ORTHO05D006648 2.9e-09 65.1 62 58.1
Sed0027803 Sechium edule HOM05D005309 ORTHO05D006648 1.5e-08 62.8 40 67.5
CSS0010052 Camellia sinensis var. sinensis HOM05D005309 ORTHO05D006648 3.6e-07 58.2 60 50.0
Lsat_1_v5_gn_4_60740 Lactuca sativa HOM05D005309 ORTHO05D006648 3.6e-07 58.2 35 74.3
Cre11.g476450 Chlamydomonas reinhardtii HOM05D005309 ORTHO05D006648 6.8e-06 53.9 58 48.3
SMO133G0033 Selaginella moellendorffii HOM05D001724 ORTHO05D007284 6.8e-06 53.9 58 44.8


User provided reference genes

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