Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00522 Sequoiadendron giganteum HOM05D003806 ORTHO05D004346 0.0e+00 1691.0 1578 100.0
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 2.2e-41 176.0 456 32.2
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 1.5e-37 163.3 430 29.8
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 1.0e-33 150.6 413 28.3
ATR0763G047 Amborella trichopoda HOM05D003806 ORTHO05D004346 6.6e-33 147.9 437 31.1
SEGI_03911 Sequoiadendron giganteum HOM05D003806 ORTHO05D002919 8.6e-33 147.5 452 32.1
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 2.1e-31 142.9 385 30.1
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 6.1e-31 141.4 453 28.9
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 5.2e-30 138.3 440 28.2
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 2.6e-29 136.0 375 31.2
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 7.5e-29 134.4 440 29.5
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 1.8e-27 129.8 418 28.9
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 3.5e-26 125.6 349 29.8
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 2.3e-25 122.9 404 30.2
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 3.8e-25 122.1 363 30.6
PSO541G2929 Papaver somniferum HOM05D003806 ORTHO05D004346 8.6e-25 120.9 431 28.3
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 8.6e-25 120.9 415 27.5
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 1.9e-24 119.8 408 27.7
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 2.5e-24 119.4 430 27.9
Actinidia12513 Actinidia chinensis HOM05D003806 ORTHO05D004346 9.5e-24 117.5 277 29.6
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 1.2e-23 117.1 432 26.9
SEGI_34534 Sequoiadendron giganteum HOM05D002721 ORTHO05D002919 3.6e-23 115.5 427 31.4
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 1.8e-22 113.2 430 27.2
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 1.8e-22 113.2 362 29.6
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 4.0e-22 112.1 427 26.7
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 6.8e-22 111.3 317 31.2
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 7.5e-21 107.8 376 26.6
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 9.8e-21 107.5 376 26.3
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 1.3e-20 107.1 432 25.9
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 1.7e-20 106.7 350 26.6
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 4.9e-20 105.1 363 27.3
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 6.4e-20 104.8 419 27.7
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 1.1e-19 104.0 425 25.9
HanXRQChr17g0541141 Helianthus annuus HOM05D003806 ORTHO05D004346 1.4e-19 103.6 304 28.0
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 1.4e-19 103.6 302 30.5
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 2.4e-19 102.8 363 27.3
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 7.0e-19 101.3 642 23.4
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 1.6e-18 100.1 351 25.4
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 6.0e-18 98.2 277 28.5
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 1.0e-17 97.4 376 25.3
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 1.0e-17 97.4 425 25.4
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 3.9e-17 95.5 394 26.4
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 1.1e-16 94.0 297 30.0
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 1.5e-16 93.6 389 26.2
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.9e-16 93.2 424 25.2
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 3.3e-16 92.4 376 24.5
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 3.3e-16 92.4 376 24.5
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 4.3e-16 92.0 440 24.8
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 9.5e-16 90.9 449 23.8
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 1.2e-15 90.5 284 29.9
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.2e-15 90.5 376 25.3
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 2.1e-15 89.7 352 26.7
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 2.1e-15 89.7 263 28.5
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 2.8e-15 89.4 322 29.5
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 4.7e-15 88.6 440 22.7
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 4.7e-15 88.6 440 22.7
ATR0763G279 Amborella trichopoda HOM05D003806 ORTHO05D004346 1.1e-14 87.4 337 27.9
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 1.4e-14 87.0 276 29.3
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 1.8e-14 86.7 351 24.5
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 5.2e-14 85.1 211 30.3
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 1.2e-13 84.0 390 23.8
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 1.2e-13 84.0 309 28.8
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 4.4e-13 82.0 287 26.5
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 5.8e-13 81.6 361 25.2
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 7.5e-13 81.3 254 28.0
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 1.7e-12 80.1 488 24.6
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 1.7e-12 80.1 411 25.5
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 4.9e-12 78.6 432 22.0
Peaxi162Scf00141g01119 Petunia axillaris HOM05D001948 ORTHO05D001873 6.4e-12 78.2 381 27.6
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 1.4e-11 77.0 526 23.6
Zm00001eb070840 Zea mays HOM05D003806 ORTHO05D004346 7.0e-11 74.7 148 33.1
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 6.0e-10 71.6 424 23.8
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 1.0e-09 70.9 425 24.0
HanXRQChr15g0470351 Helianthus annuus HOM05D003806 ORTHO05D004346 1.3e-09 70.5 217 27.2
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 2.3e-09 69.7 419 24.3
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 3.0e-09 69.3 259 26.3
unitig_85.g27313 Utricularia gibba HOM05D003806 ORTHO05D004346 3.0e-09 69.3 304 26.6
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 5.1e-09 68.6 487 23.0
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 6.6e-09 68.2 385 24.2
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 6.6e-09 68.2 435 23.9
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.5e-08 66.2 394 24.1
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 9.5e-08 64.3 124 38.7
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 9.5e-08 64.3 248 27.0
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 1.2e-07 63.9 426 22.8
Sp4g14610 Schrenkiella parvula HOM05D003806 ORTHO05D004346 2.1e-07 63.2 187 28.9
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 8.1e-07 61.2 429 22.8
MBI15_g42002_MAGBIO Magnolia biondii HOM05D002721 ORTHO05D002919 1.4e-06 60.5 244 27.0
CANSAT64G1938 Cannabis sativa HOM05D003806 ORTHO05D004346 2.3e-06 59.7 205 29.3
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 4.0e-06 58.9 448 21.4
CANSAT64G0632 Cannabis sativa HOM05D002721 ORTHO05D002919 6.8e-06 58.2 251 27.9
ATR0691G037 Amborella trichopoda HOM05D002721 ORTHO05D002919 8.9e-06 57.8 330 26.1


User provided reference genes

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