Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0111900 Rhododendron simsii HOM05D011528 ORTHO05D015218 1.2e-155 553.1 278 100.0
Rhsim08G0172700 Rhododendron simsii HOM05D001156 ORTHO05D000024 3.1e-87 325.9 283 62.5
Rhsim05G0097500 Rhododendron simsii HOM05D011528 ORTHO05D015218 1.0e-82 310.8 276 61.2
Rhsim05G0179000 Rhododendron simsii HOM05D011528 ORTHO05D015218 6.7e-74 281.6 280 57.9
Rhsim04G0060200 Rhododendron simsii HOM05D000038 ORTHO05D000689 1.8e-39 167.2 138 65.9
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 7.0e-31 138.7 72 88.9
Rhsim01G0065000 Rhododendron simsii HOM05D011528 ORTHO05D030534 2.5e-28 130.2 152 47.4
RhsimUnG0245700 Rhododendron simsii HOM05D012979 ORTHO05D000002 9.5e-28 128.3 140 49.3
RhsimUnG0151200 Rhododendron simsii HOM05D000370 ORTHO05D001366 1.2e-27 127.9 152 49.3
Rhsim02G0135300 Rhododendron simsii HOM05D012979 ORTHO05D009927 3.0e-26 123.2 161 46.0
RhsimUnG0112400 Rhododendron simsii HOM05D011528 ORTHO05D015218 3.7e-24 116.3 58 91.4
RhsimUnG0084300 Rhododendron simsii HOM05D011528 ORTHO05D000563 1.1e-20 104.8 104 54.8
CSS0047647 Camellia sinensis var. sinensis HOM05D011528 ORTHO05D015218 1.2e-17 94.7 110 54.5
Rhsim01G0165700 Rhododendron simsii HOM05D012979 ORTHO05D009927 2.0e-17 94.0 295 30.8
PSO356G0054 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-16 89.7 286 28.3
RhsimUnG0177700 Rhododendron simsii HOM05D012979 ORTHO05D009927 4.9e-16 89.4 295 30.5
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.2e-15 86.7 287 27.5
CSS0021273 Camellia sinensis var. sinensis HOM05D011528 ORTHO05D015218 2.0e-14 84.0 100 53.0
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 4.6e-14 82.8 275 25.1
Rhsim08G0252200 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.6e-14 82.8 281 27.8
FvH4_4g08352 Fragaria vesca HOM05D000004 ORTHO05D000002 2.3e-13 80.5 291 24.7
PGR119G1429 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-12 77.0 285 24.9
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 9.5e-12 75.1 277 23.1
PSO067G0006 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-11 74.3 281 24.2
PSO782G4047 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-11 74.3 281 24.2
Atru.chr1.2265 Acer truncatum HOM05D000004 ORTHO05D000002 2.8e-11 73.6 290 26.6
PSO781G0180 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-11 73.2 281 27.4
PSO832G0610 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-11 73.2 279 24.0
TWI14G0868 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.7e-11 72.8 278 27.0
EL10Ac1g00890 Beta vulgaris HOM05D008382 ORTHO05D000002 6.2e-11 72.4 275 28.7
PSO675G4320 Papaver somniferum HOM05D000004 ORTHO05D000002 8.0e-11 72.0 281 27.0
PGR002G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-10 71.6 283 23.7
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-10 71.6 291 24.7
PSO063G1387 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-10 71.2 281 23.8
PSO675G3106 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-10 71.2 275 24.4
PGR102G0017 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-10 71.2 274 25.9
PSO173G0122 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-10 70.9 281 25.6
PSO801G0002 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-10 70.5 281 27.0
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 3.1e-10 70.1 284 27.1
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-10 70.1 277 24.5
PSO063G7638 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-10 70.1 280 26.4
PSO675G1206 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-10 70.1 275 24.0
TWI18G1168 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.1e-10 70.1 276 24.3
ATR0757G085 Amborella trichopoda HOM05D033186 ORTHO05D015218 5.2e-10 69.3 132 37.9
EL10Ac2g03002 Beta vulgaris HOM05D000004 ORTHO05D000002 5.2e-10 69.3 280 25.4
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 5.2e-10 69.3 277 23.1
Prupe.8G084500 Prunus persica HOM05D000004 ORTHO05D000002 5.2e-10 69.3 283 25.4
PGR004G2180 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-10 69.3 281 23.8
PGR083G2793 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-10 69.3 283 24.4
PSO017G7238 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-10 68.9 286 28.0
PSO161G0062 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-10 68.9 275 25.1
PSO478G0516 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-10 68.9 273 24.9
PSO675G6845 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-10 68.9 270 24.8
PSO384G1745 Papaver somniferum HOM05D000004 ORTHO05D000002 8.9e-10 68.6 285 24.6
PGR083G1744 Punica granatum HOM05D000004 ORTHO05D000002 8.9e-10 68.6 283 24.4
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 8.9e-10 68.6 289 26.6
TWI09G1040 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.9e-10 68.6 287 27.5
PSO063G4042 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-09 68.2 275 24.7
PSO339G3112 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-09 68.2 276 22.8
PGR083G2455 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-09 68.2 281 22.8
TWI38G0978 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.2e-09 68.2 284 26.4
Atru.chr6.119 Acer truncatum HOM05D000004 ORTHO05D000002 1.5e-09 67.8 291 24.7
PSO724G0202 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-09 67.4 275 24.4
PSO675G6918 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-09 67.0 276 27.5
TWI09G0867 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.6e-09 67.0 286 26.6
ECA246G3149 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-09 66.6 278 21.2
PSO210G5884 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-09 66.2 279 25.1
PSO591G0211 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-09 66.2 288 24.7
SEGI_35976 Sequoiadendron giganteum HOM05D013116 ORTHO05D012902 4.4e-09 66.2 68 45.6
ECA246G1906 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.8e-09 65.9 293 24.9
FvH4_2g19252 Fragaria vesca HOM05D000004 ORTHO05D000002 5.8e-09 65.9 265 25.7
ECA236G0016 Erigeron canadensis HOM05D009731 ORTHO05D010740 7.5e-09 65.5 279 22.2
PSO732G0311 Papaver somniferum HOM05D000004 ORTHO05D000002 9.8e-09 65.1 284 23.9
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 9.8e-09 65.1 287 24.7
PSO339G1513 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-08 64.7 281 24.6
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-08 64.3 282 23.8
SGA_v2.0_scaffold106G30536 Striga asiatica HOM05D000004 ORTHO05D000002 1.7e-08 64.3 287 23.7
PGR017G0004 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 63.9 266 24.8
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 2.9e-08 63.5 285 24.2
PSO017G2500 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-08 63.5 281 22.8
PSO423G0076 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-08 63.5 283 25.1
ECA232G4583 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-08 63.2 275 20.7
ECA246G3946 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-08 63.2 292 24.7
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 3.7e-08 63.2 277 21.7
PSO063G5223 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-08 62.8 328 24.4
PGR031G2743 Punica granatum HOM05D000004 ORTHO05D000002 4.9e-08 62.8 270 23.0
Rhsim02G0159800 Rhododendron simsii HOM05D011528 ORTHO05D339468 4.9e-08 62.8 51 58.8
SEGI_34931 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.9e-08 62.8 252 23.0
Rhsim09G0176000 Rhododendron simsii HOM05D011528 ORTHO05D030534 6.4e-08 62.4 199 30.2
ECA232G1284 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.3e-08 62.0 274 19.7
PSO384G2288 Papaver somniferum HOM05D000004 ORTHO05D000002 8.3e-08 62.0 280 25.0
SGA_v2.0_scaffold366G50025 Striga asiatica HOM05D000004 ORTHO05D000002 8.3e-08 62.0 291 25.8
Thecc.05G097400 Theobroma cacao HOM05D000004 ORTHO05D000002 8.3e-08 62.0 285 22.5
RhsimUnG0194800 Rhododendron simsii HOM05D000920 ORTHO05D000626 1.1e-07 61.6 75 45.3
Ca_27390_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-07 61.2 276 23.6
Rhsim13G0079100 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.4e-07 61.2 68 45.6
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-07 60.8 277 22.7
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 2.4e-07 60.5 277 21.7
Hma1.2p1_0341F.1_g130310 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.4e-07 60.5 96 34.4
PSO063G2046 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-07 60.5 58 46.6
PGR031G1659 Punica granatum HOM05D000004 ORTHO05D000002 2.4e-07 60.5 283 24.7
ECA248G1279 Erigeron canadensis HOM05D002530 ORTHO05D002802 3.2e-07 60.1 284 23.2
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 3.2e-07 60.1 279 22.9
Potri.003G026106 Populus trichocarpa HOM05D028484 ORTHO05D000002 3.2e-07 60.1 299 21.7
EL10As2g23215 Beta vulgaris HOM05D008382 ORTHO05D000002 4.1e-07 59.7 280 25.0
PSO339G0871 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-07 59.7 302 24.2
PSO339G2721 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-07 59.3 272 24.6
PSO675G1879 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-07 59.3 58 48.3
Rhsim06G0029600 Rhododendron simsii HOM05D000004 ORTHO05D000563 5.4e-07 59.3 81 39.5
PSO781G0082 Papaver somniferum HOM05D000004 ORTHO05D000002 7.1e-07 58.9 58 46.6
PSO170G1516 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-07 58.5 328 23.8
PSO339G5592 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-07 58.5 291 21.6
QL05p044227 Quercus lobata HOM05D000004 ORTHO05D000002 9.2e-07 58.5 286 25.2
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 9.2e-07 58.5 286 22.0
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 58.2 272 24.3
Rhsim06G0132200 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.2e-06 58.2 79 43.0
Rhsim10G0118600 Rhododendron simsii HOM05D000362 ORTHO05D000325 1.2e-06 58.2 79 41.8
FvH4_5g28291 Fragaria vesca HOM05D000004 ORTHO05D000563 1.6e-06 57.8 69 43.5
PGR102G3222 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-06 57.8 276 23.9
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.6e-06 57.8 274 22.6
Manes.14G147049 Manihot esculenta HOM05D000004 ORTHO05D000002 2.1e-06 57.4 286 24.5
PSO170G4585 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-06 57.4 282 24.1
PSO478G2375 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-06 57.4 285 22.5
PSO832G2392 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-06 57.4 58 46.6
PGR044G1270 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-06 57.4 278 21.2
Rhsim01G0096600 Rhododendron simsii HOM05D000121 ORTHO05D000002 2.1e-06 57.4 79 43.0
Rhsim02G0040000 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.1e-06 57.4 75 42.7
SEGI_16029 Sequoiadendron giganteum HOM05D013116 ORTHO05D012902 2.1e-06 57.4 101 38.6
EL10Ac3g06996 Beta vulgaris HOM05D008382 ORTHO05D000563 3.5e-06 56.6 277 26.4
AUR62024270 Chenopodium quinoa HOM05D008382 ORTHO05D000002 3.5e-06 56.6 267 25.1
FvH4_3g23752 Fragaria vesca HOM05D000004 ORTHO05D014643 4.6e-06 56.2 69 43.5
PSO407G0392 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-06 56.2 82 35.4
PSO675G7964 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-06 56.2 291 25.1
FvH4_4g12742 Fragaria vesca HOM05D000004 ORTHO05D000002 6.0e-06 55.8 311 21.5
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 6.0e-06 55.8 293 24.2
Rhsim08G0120100 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.0e-06 55.8 66 43.9
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 6.0e-06 55.8 276 25.0
Thecc.01G105600 Theobroma cacao HOM05D000004 ORTHO05D000563 6.0e-06 55.8 273 23.8
TPR.G39423 Trifolium pratense HOM05D000004 ORTHO05D000002 6.0e-06 55.8 58 46.6
TWI56G1174 Tripterygium wilfordii HOM05D000004 ORTHO05D000048 6.0e-06 55.8 280 23.6
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 7.8e-06 55.5 285 23.9
Hma1.2p1_0296F.1_g116840 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.8e-06 55.5 62 41.9
Hma1.2p1_2119F.1_g314400 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.8e-06 55.5 69 39.1
QL05p022806 Quercus lobata HOM05D000004 ORTHO05D000002 7.8e-06 55.5 301 23.9
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 7.8e-06 55.5 81 38.3
Rhsim04G0098200 Rhododendron simsii HOM05D000004 ORTHO05D000563 7.8e-06 55.5 86 36.0
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 7.8e-06 55.5 81 38.3
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 7.8e-06 55.5 81 38.3


User provided reference genes

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