Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.4e-208 727.6 346 100.0
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.4e-208 727.6 346 100.0
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.4e-208 727.6 346 100.0
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.1e-206 723.0 346 99.4
RhsimUnG0034500 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.2e-206 719.9 346 98.8
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.6e-204 713.4 345 98.0
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.5e-147 526.6 352 74.7
RhsimUnG0034400 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.4e-144 515.4 345 75.4
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.7e-143 513.1 352 72.4
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.2e-141 506.9 352 71.9
RhsimUnG0035000 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.1e-115 420.6 340 64.7
RhsimUnG0033700 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.3e-54 216.5 296 45.6
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.0e-44 183.0 359 37.0
Rhsim09G0205400 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.4e-33 147.9 172 48.3
Rhsim05G0082300 Rhododendron simsii HOM05D000130 ORTHO05D000257 7.6e-27 125.6 98 66.3
Rhsim03G0011900 Rhododendron simsii HOM05D018081 ORTHO05D010877 3.9e-23 113.2 344 28.2
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 1.4e-17 94.7 297 28.6
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 7.9e-16 89.0 302 27.8
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.0e-15 88.6 320 29.1
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 1.8e-15 87.8 359 25.1
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 3.0e-15 87.0 317 26.2
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 5.1e-15 86.3 317 26.2
Rhsim12G0158900 Rhododendron simsii HOM05D000374 ORTHO05D000238 2.5e-14 84.0 284 29.6
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.3e-14 83.6 313 27.2
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 4.3e-14 83.2 309 30.1
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 2.2e-13 80.9 254 28.7
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 2.2e-13 80.9 334 27.2
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 4.8e-13 79.7 190 31.1
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 1.1e-12 78.6 280 28.2
Rhsim10G0137100 Rhododendron simsii HOM05D000374 ORTHO05D013046 1.8e-12 77.8 323 29.7
Aqoxy2G00744 Aquilegia oxysepala HOM05D002402 ORTHO05D002633 4.1e-12 76.6 192 27.1
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.9e-12 75.9 302 26.2
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.1e-12 75.5 238 27.7
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.0e-10 72.0 152 34.2
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 1.7e-10 71.2 204 27.9
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.1e-09 68.6 193 30.6
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 1.1e-09 68.6 377 23.1
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 1.9e-09 67.8 319 23.2
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 4.2e-09 66.6 292 27.4
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 4.2e-09 66.6 292 27.4
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 5.5e-09 66.2 142 33.1
COL.COLO4_31615 Corchorus olitorius HOM05D052704 ORTHO05D044704 5.5e-09 66.2 137 30.7
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 7.2e-09 65.9 192 30.2
Rhsim04G0202700 Rhododendron simsii HOM05D025536 ORTHO05D010877 1.2e-08 65.1 256 26.6
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 1.6e-08 64.7 201 26.4
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 1.6e-08 64.7 371 24.0
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 2.7e-08 63.9 255 23.9
Gohir.D06G038800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.7e-08 63.2 207 27.5
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 6.1e-08 62.8 120 32.5
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 7.9e-08 62.4 165 31.5
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 7.9e-08 62.4 131 32.1
AL7G11720 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.4e-07 61.6 221 28.1
A04p08940 Brassica napus HOM05D000249 ORTHO05D000206 1.4e-07 61.6 117 32.5
BraA04t16590Z Brassica rapa HOM05D000249 ORTHO05D000206 1.4e-07 61.6 117 32.5
Gorai.010G041400 Gossypium raimondii HOM05D009781 ORTHO05D011819 3.0e-07 60.5 195 27.7
COL.COLO4_16992 Corchorus olitorius HOM05D017991 ORTHO05D020493 3.9e-07 60.1 121 37.2
C04p42830 Brassica napus HOM05D000249 ORTHO05D000206 6.7e-07 59.3 117 31.6
BolC4t25849H Brassica oleracea HOM05D000249 ORTHO05D000206 6.7e-07 59.3 117 31.6
CARHR113030 Cardamine hirsuta HOM05D000249 ORTHO05D000206 6.7e-07 59.3 194 27.8
Gohir.D06G036900 Gossypium hirsutum HOM05D009781 ORTHO05D011819 8.8e-07 58.9 195 27.2
Rhsim12G0051600 Rhododendron simsii HOM05D010628 ORTHO05D016249 8.8e-07 58.9 184 26.6
Sp7g29610 Schrenkiella parvula HOM05D000249 ORTHO05D000206 8.8e-07 58.9 164 29.3
AL6G47530 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.1e-06 58.5 243 26.7
AT4G39550 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.5e-06 58.2 164 27.4
Atru.chr12.1168 Acer truncatum HOM05D000249 ORTHO05D000206 2.6e-06 57.4 121 29.8
AT4G39590 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 3.3e-06 57.0 209 25.8
AT4G39580 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 4.4e-06 56.6 156 29.5
Potri.007G081100 Populus trichocarpa HOM05D000249 ORTHO05D000206 4.4e-06 56.6 115 35.7
Sp7g31430 Schrenkiella parvula HOM05D000249 ORTHO05D000206 4.4e-06 56.6 133 33.1
Carub.0007s0145 Capsella rubella HOM05D000249 ORTHO05D000206 5.7e-06 56.2 156 29.5
COL.COLO4_11012 Corchorus olitorius HOM05D000249 ORTHO05D000206 5.7e-06 56.2 203 25.1
Haze_19846 Corylus avellana HOM05D027064 ORTHO05D009743 5.7e-06 56.2 166 27.7
Lsat_1_v5_gn_9_117460 Lactuca sativa HOM05D003569 ORTHO05D004178 5.7e-06 56.2 124 32.3
AL1G54770 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.4e-06 55.8 217 26.3
Carub.0008s0881 Capsella rubella HOM05D000249 ORTHO05D000206 7.4e-06 55.8 130 34.6
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 7.4e-06 55.8 126 34.9


User provided reference genes

Program Settings