Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0014500 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.4e-207 726.1 369 100.0
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 2.7e-179 632.1 340 95.0
Actinidia22072 Actinidia chinensis HOM05D004807 ORTHO05D005915 6.0e-179 630.9 355 89.9
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 4.7e-176 621.3 369 85.4
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.1e-175 620.2 462 73.4
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 8.6e-170 600.5 372 82.3
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 4.7e-168 594.7 369 80.2
Nitab4.5_0001079g0110 Nicotiana tabacum HOM05D004807 ORTHO05D005915 3.1e-167 592.0 369 80.8
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 4.9e-165 584.7 370 79.2
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 1.4e-164 583.2 370 78.9
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 4.6e-163 578.2 369 79.4
Ciclev10011630m.g Citrus clementina HOM05D004807 ORTHO05D005915 4.6e-163 578.2 370 80.5
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 5.6e-161 571.2 368 78.3
DCAR_017047 Daucus carota HOM05D004807 ORTHO05D005915 3.6e-160 568.5 368 78.3
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 8.1e-160 567.4 369 77.2
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 1.1e-159 567.0 369 75.9
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 1.4e-159 566.6 369 75.9
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 2.0e-158 562.8 369 75.6
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 3.4e-158 562.0 369 75.3
Potri.006G197200 Populus trichocarpa HOM05D004807 ORTHO05D005915 4.9e-157 558.1 369 77.2
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 6.4e-157 557.8 368 76.9
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 1.9e-156 556.2 369 77.8
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 3.2e-156 555.4 369 76.4
Dinv25022 Davidia involucrata HOM05D004807 ORTHO05D005915 9.3e-156 553.9 352 81.0
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 2.7e-155 552.4 368 77.4
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 1.3e-154 550.1 369 77.0
Cpa.g.sc85.18 Carica papaya HOM05D004807 ORTHO05D005915 6.6e-154 547.7 370 75.4
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 1.3e-152 543.5 369 76.2
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 2.1e-152 542.7 369 74.0
CsaV3_7G005530 Cucumis sativus L. HOM05D004807 ORTHO05D005915 2.1e-152 542.7 369 74.0
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 3.6e-152 542.0 368 73.9
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 3.6e-152 542.0 373 74.8
MELO3C009593.2 Cucumis melo HOM05D004807 ORTHO05D005915 6.2e-152 541.2 369 73.7
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 3.1e-151 538.9 369 75.3
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.5e-150 536.6 369 75.1
PGR142G0165 Punica granatum HOM05D004807 ORTHO05D005915 2.0e-150 536.2 369 74.0
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 2.0e-150 536.2 369 72.9
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 3.4e-150 535.4 369 75.6
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 5.8e-150 534.6 369 73.4
Actinidia01589 Actinidia chinensis HOM05D004807 ORTHO05D005915 4.9e-149 531.6 364 76.1
Eucgr.K01882 Eucalyptus grandis HOM05D004807 ORTHO05D005915 4.9e-149 531.6 369 73.7
Sabra06G0151700 Salix brachista HOM05D004807 ORTHO05D005915 2.4e-148 529.3 391 72.1
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 3.2e-148 528.9 366 72.1
Hund19221 Selenicereus undatus HOM05D004807 ORTHO05D005915 3.5e-147 525.4 368 70.9
MSTRG.19928 Avicennia marina HOM05D004807 ORTHO05D005915 6.0e-147 524.6 369 72.4
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.0e-146 523.9 391 70.8
FAN09G2962 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.6e-144 516.5 391 69.8
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 4.8e-144 515.0 360 72.8
THA.LOC104826780 Tarenaya hassleriana HOM05D004807 ORTHO05D005915 6.2e-144 514.6 371 69.5
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 1.8e-143 513.1 369 70.5
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 3.1e-143 512.3 355 73.8
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 6.9e-143 511.1 369 70.5
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.0e-142 509.6 425 64.9
Sp3g10180 Schrenkiella parvula HOM05D004807 ORTHO05D005915 2.0e-142 509.6 369 68.0
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 2.6e-142 509.2 369 70.2
CARHR086510 Cardamine hirsuta HOM05D004807 ORTHO05D005915 5.8e-142 508.1 368 67.7
BcaC05g29309 Brassica carinata HOM05D004807 ORTHO05D005915 1.3e-141 506.9 368 67.7
BolC5t34266H Brassica oleracea HOM05D004807 ORTHO05D005915 1.3e-141 506.9 368 67.7
AL3G23560 Arabidopsis lyrata HOM05D004807 ORTHO05D005915 2.2e-141 506.1 369 68.0
FAN05G1427 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.9e-141 505.8 425 64.5
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 4.9e-141 505.0 371 70.6
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 4.9e-141 505.0 369 70.2
C05p55980 Brassica napus HOM05D004807 ORTHO05D005915 8.4e-141 504.2 368 67.4
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 8.4e-141 504.2 370 72.2
A05p37420 Brassica napus HOM05D004807 ORTHO05D005915 1.9e-140 503.1 368 67.1
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 2.5e-140 502.7 369 71.5
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 2.5e-140 502.7 372 70.2
Thhalv10019900m.g Eutrema salsugineum HOM05D004807 ORTHO05D005915 1.2e-139 500.4 370 66.8
BcaB06g25560 Brassica carinata HOM05D004807 ORTHO05D005915 1.6e-139 500.0 368 67.4
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 1.6e-139 500.0 377 68.4
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 2.1e-139 499.6 374 70.3
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 3.0e-138 495.7 344 73.5
Glyma.03G206600 Glycine max HOM05D004807 ORTHO05D005915 3.9e-138 495.4 355 71.5
vmacro12557 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 8.7e-138 494.2 264 94.7
AT3G11960 Arabidopsis thaliana HOM05D004807 ORTHO05D005915 1.1e-137 493.8 374 65.8
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 1.1e-137 493.8 347 71.8
EL10Ac3g06848 Beta vulgaris HOM05D004807 ORTHO05D005915 3.3e-137 492.3 370 68.1
Carub.0003s1129 Capsella rubella HOM05D004807 ORTHO05D005915 3.3e-137 492.3 368 67.1
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 7.4e-137 491.1 347 71.5
AUR62015288 Chenopodium quinoa HOM05D004807 ORTHO05D005915 9.6e-137 490.7 367 67.6
Medtr7g107350 Medicago truncatula HOM05D004807 ORTHO05D005915 4.8e-136 488.4 373 69.7
AUR62026870 Chenopodium quinoa HOM05D004807 ORTHO05D005915 8.2e-136 487.6 367 67.6
Aa31LG3G5560 Aethionema arabicum HOM05D004807 ORTHO05D005915 9.0e-135 484.2 412 61.2
BcaC01g04068 Brassica carinata HOM05D004807 ORTHO05D005915 1.0e-133 480.7 370 65.4
A03p37390 Brassica napus HOM05D004807 ORTHO05D005915 8.4e-133 477.6 370 65.1
C03p45390 Brassica napus HOM05D004807 ORTHO05D005915 1.4e-132 476.9 370 64.9
BolC3t16806H Brassica oleracea HOM05D004807 ORTHO05D005915 3.2e-132 475.7 380 63.7
BcaB04g18703 Brassica carinata HOM05D004807 ORTHO05D005915 7.1e-132 474.6 369 64.2
BraA03t12900Z Brassica rapa HOM05D004807 ORTHO05D005915 2.7e-131 472.6 380 63.4
BraA05t22540Z Brassica rapa HOM05D004807 ORTHO05D005915 1.8e-130 469.9 324 69.1
AUR62032732 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.8e-130 469.9 354 67.2
Nitab4.5_0005684g0020 Nicotiana tabacum HOM05D004807 ORTHO05D005915 1.1e-129 467.2 369 67.8
Psat0s2035g0040 Pisum sativum HOM05D004807 ORTHO05D005915 1.5e-129 466.8 374 66.0
TPR.G32304 Trifolium pratense HOM05D004807 ORTHO05D005915 5.7e-129 464.9 374 66.3
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 2.2e-128 463.0 375 68.5
Ah.04g153050 Amaranthus hybridus HOM05D004807 ORTHO05D005915 1.4e-127 460.3 370 64.1
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 4.5e-126 455.3 369 64.0
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 4.6e-123 445.3 369 65.0
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 4.1e-119 432.2 369 64.0
SEGI_25187 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 2.5e-100 369.8 369 52.0
Zm00001eb302880 Zea mays HOM05D004807 ORTHO05D005915 2.7e-94 349.7 352 54.0
CSS0045552 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 5.0e-93 345.5 215 81.4
ECA238G3196 Erigeron canadensis HOM05D004807 ORTHO05D005915 1.9e-92 343.6 223 78.0
Os07g0203700 Oryza sativa ssp. japonica HOM05D004807 ORTHO05D005915 1.9e-92 343.6 365 53.2
HPP92_017552 Vanilla planifolia HOM05D004807 ORTHO05D005915 2.7e-91 339.7 363 51.2
Oeu046734.3 Olea europaea HOM05D004807 ORTHO05D005915 2.0e-86 323.6 196 80.6
CDE05G3662 Ceratophyllum demersum HOM05D004807 ORTHO05D005915 3.5e-86 322.8 345 52.5
Pp3c24_19520 Physcomitrium patens HOM05D004807 ORTHO05D005915 1.3e-80 304.3 321 49.5
Mapoly0005s0200 Marchantia polymorpha HOM05D004807 ORTHO05D005915 2.2e-80 303.5 367 45.2
Actinidia27127 Actinidia chinensis HOM05D004807 ORTHO05D005915 7.3e-76 288.5 177 86.4
Lsat_1_v5_gn_3_12560 Lactuca sativa HOM05D004807 ORTHO05D005915 8.0e-75 285.0 222 66.7
AagrBONN_evm.TU.Sc2ySwM_228.687 Anthoceros agrestis HOM05D004807 ORTHO05D005915 6.6e-69 265.4 313 45.0
SMO276G0043 Selaginella moellendorffii HOM05D004807 ORTHO05D005915 3.6e-67 259.6 305 44.6
unitig_0.g510 Utricularia gibba HOM05D004807 ORTHO05D005915 3.1e-58 229.9 143 74.1
FAN14G5853 Fragaria x ananassa HOM05D004807 ORTHO05D005915 3.7e-56 223.0 265 51.3
Haze_20075 Corylus avellana HOM05D004807 ORTHO05D005915 2.7e-54 216.9 160 70.6
SHI30024 Sapria himalayana HOM05D004807 ORTHO05D005915 1.8e-50 204.1 188 58.5
CSS0049837 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 1.6e-43 181.0 104 90.4
TPR.G10577 Trifolium pratense HOM05D004807 ORTHO05D005915 5.1e-37 159.5 204 48.5
unitig_0.g509 Utricularia gibba HOM05D004807 ORTHO05D005915 2.2e-32 144.1 145 56.6
CBR_g51523 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-28 129.4 134 44.8
vmacro12556 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 6.5e-24 115.9 69 91.3
Cfa020119 Carpinus fangiana HOM05D004807 ORTHO05D021976 1.9e-20 104.4 64 76.6
arahy.Tifrunner.gnm1.ann1.WKN0A4 Arachis hypogaea HOM05D002533 ORTHO05D002855 1.6e-14 84.7 185 35.7
Hma1.2p1_0516F.1_g170580 Hydrangea macrophylla HOM05D004807 ORTHO05D005915 8.2e-11 72.4 60 66.7


User provided reference genes

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