Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 3.0e-142 508.4 249 100.0
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 2.5e-120 435.6 255 87.1
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.9e-91 339.7 183 90.7
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 4.1e-91 338.6 252 72.6
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 3.5e-90 335.5 244 70.9
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 1.3e-89 333.6 251 72.1
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 8.6e-89 330.9 252 70.2
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 1.9e-88 329.7 280 63.6
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 2.8e-87 325.9 245 69.4
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 4.7e-87 325.1 243 69.5
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 4.7e-87 325.1 243 69.5
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.7e-87 325.1 239 70.7
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.7e-87 325.1 239 70.7
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 1.1e-86 323.9 236 71.2
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 1.4e-86 323.6 253 70.0
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 3.1e-86 322.4 245 68.2
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 6.8e-86 321.2 267 65.2
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 6.8e-86 321.2 232 74.1
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.2e-85 320.5 244 69.3
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 4.4e-85 318.5 246 68.3
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 7.5e-85 317.8 246 69.1
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 7.5e-85 317.8 236 68.2
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 9.9e-85 317.4 249 66.3
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 9.9e-85 317.4 239 68.6
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.3e-84 317.0 238 67.6
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 2.9e-84 315.8 183 83.1
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 3.7e-84 315.5 238 68.1
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 8.3e-84 314.3 188 80.3
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.4e-83 313.5 188 81.4
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 2.4e-83 312.8 240 67.9
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 2.4e-83 312.8 253 65.2
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 4.1e-83 312.0 246 66.3
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 5.4e-83 311.6 238 67.6
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 7.1e-83 311.2 261 64.8
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 9.2e-83 310.8 184 80.4
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.6e-82 310.1 184 80.4
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.1e-82 309.7 187 83.4
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 6.0e-82 308.1 248 65.7
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.3e-81 307.0 251 65.7
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 3.0e-81 305.8 184 79.9
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 3.9e-81 305.4 240 66.7
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 6.6e-81 304.7 182 82.4
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 6.6e-81 304.7 212 73.1
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.5e-80 303.5 188 77.7
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 1.5e-80 303.5 181 79.6
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 1.9e-80 303.1 236 67.8
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 3.3e-80 302.4 182 79.1
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 5.6e-80 301.6 230 68.3
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 7.3e-80 301.2 224 70.5
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 9.5e-80 300.8 169 84.0
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 9.5e-80 300.8 246 65.4
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 1.6e-79 300.1 261 64.8
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 2.1e-79 299.7 234 65.8
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 2.8e-79 299.3 228 67.1
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 4.7e-79 298.5 249 62.2
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 6.2e-79 298.1 238 65.1
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 8.1e-79 297.7 244 63.5
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.1e-78 297.4 169 83.4
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 3.1e-78 295.8 245 63.7
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 6.8e-78 294.7 179 78.8
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.2e-77 293.9 230 66.5
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.5e-77 293.5 231 66.2
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.5e-77 293.5 231 66.2
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.5e-77 293.5 231 66.2
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.6e-77 292.7 180 78.9
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 7.6e-77 291.2 195 76.4
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 3.8e-76 288.9 229 65.5
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 4.9e-76 288.5 229 66.8
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 6.4e-76 288.1 168 79.8
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 6.4e-76 288.1 227 66.1
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 8.4e-76 287.7 254 62.6
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 8.4e-76 287.7 254 62.6
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.4e-75 287.0 231 63.6
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.4e-75 287.0 249 62.2
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.4e-75 287.0 234 64.1
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 1.9e-75 286.6 235 63.8
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.4e-75 286.2 241 64.3
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 5.4e-75 285.0 231 64.5
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 5.4e-75 285.0 201 68.7
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 9.2e-75 284.3 245 60.0
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 1.6e-74 283.5 230 66.1
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 3.5e-74 282.3 162 82.7
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 7.8e-74 281.2 171 75.4
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 1.3e-73 280.4 165 80.0
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.7e-73 280.0 171 78.9
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 5.1e-73 278.5 239 59.0
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.5e-72 276.9 161 83.9
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.3e-72 275.8 185 75.1
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.5e-69 266.9 168 73.8
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 3.4e-69 265.8 265 54.7
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 1.2e-66 257.3 180 70.6
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 5.1e-65 251.9 213 59.6
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 2.4e-62 243.0 186 65.1
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.5e-61 240.4 165 66.7
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 4.5e-61 238.8 228 58.8
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 3.2e-59 232.6 236 55.1
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 4.2e-59 232.3 173 65.3
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 3.9e-57 225.7 232 56.0
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 5.6e-56 221.9 196 63.3
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 6.2e-55 218.4 113 91.2
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 3.4e-53 212.6 217 58.1
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 4.9e-52 208.8 131 74.0
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 1.3e-49 200.7 126 73.8
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.5e-45 187.2 114 77.2
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.0e-44 184.5 116 75.0
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.1e-43 181.0 114 75.4
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 2.5e-43 179.9 114 75.4
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 5.1e-41 172.2 164 59.1
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 6.7e-41 171.8 113 75.2
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 7.4e-40 168.3 181 49.2
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 1.3e-39 167.5 180 47.8
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.3e-39 167.5 116 69.8
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 3.7e-39 166.0 109 72.5
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.3e-23 114.4 167 39.5
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.4e-22 110.9 123 53.7
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.1e-16 91.3 53 79.2
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 2.2e-15 87.0 167 31.7
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 3.5e-13 79.7 168 31.0
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 7.7e-13 78.6 179 27.4
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.2e-10 71.2 67 53.7
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 3.7e-07 59.7 60 55.0
AagrBONN_evm.TU.Sc2ySwM_340.195 Anthoceros agrestis HOM05D006649 ORTHO05D023509 1.8e-06 57.4 106 33.0


User provided reference genes

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