Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 2.4e-150 535.4 259 100.0
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 8.3e-111 404.1 259 76.4
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 3.4e-104 382.1 263 73.0
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 4.2e-94 348.6 230 73.9
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 6.6e-92 341.3 212 74.5
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.9e-91 339.7 239 66.5
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 5.6e-91 338.2 259 66.0
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 9.6e-91 337.4 249 67.5
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 2.1e-90 336.3 245 66.5
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 2.1e-90 336.3 260 65.0
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 3.6e-90 335.5 258 64.3
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 3.6e-90 335.5 255 64.3
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 1.1e-89 334.0 261 63.2
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.8e-89 333.2 251 63.3
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 3.1e-89 332.4 248 66.1
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 1.5e-88 330.1 254 63.0
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 2.0e-88 329.7 240 65.4
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 2.6e-88 329.3 260 64.6
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 2.6e-88 329.3 261 64.8
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 4.4e-88 328.6 235 66.8
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 4.4e-88 328.6 261 63.6
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 7.6e-88 327.8 239 66.1
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 7.6e-88 327.8 257 63.4
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 9.9e-88 327.4 208 74.5
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.7e-87 326.6 246 65.9
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.9e-87 325.9 263 64.6
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 2.9e-87 325.9 257 61.5
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 4.9e-87 325.1 263 62.4
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 8.4e-87 324.3 230 67.0
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.1e-86 323.9 252 63.5
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.4e-86 323.6 239 66.9
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 1.9e-86 323.2 260 61.2
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 2.4e-86 322.8 241 65.1
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 2.4e-86 322.8 245 62.4
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 3.2e-86 322.4 217 69.6
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 5.4e-86 321.6 206 72.8
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 9.3e-86 320.9 214 66.4
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 1.6e-85 320.1 194 76.8
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.6e-85 320.1 251 62.5
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 2.1e-85 319.7 217 69.1
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.7e-85 319.3 227 65.2
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 2.7e-85 319.3 227 65.2
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 2.7e-85 319.3 260 60.8
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 4.6e-85 318.5 263 62.0
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 7.8e-85 317.8 227 65.2
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 1.0e-84 317.4 255 61.6
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 1.0e-84 317.4 210 70.5
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.7e-84 316.6 240 65.0
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 2.3e-84 316.2 245 62.9
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 3.0e-84 315.8 252 64.7
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 3.9e-84 315.5 217 67.7
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 3.9e-84 315.5 228 68.0
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 5.1e-84 315.1 212 68.4
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 5.1e-84 315.1 248 59.7
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 8.7e-84 314.3 210 69.0
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 2.5e-83 312.8 222 67.6
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 3.3e-83 312.4 225 66.7
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 2.4e-81 306.2 247 64.0
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 6.9e-81 304.7 220 67.3
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 9.0e-81 304.3 201 67.2
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 3.4e-80 302.4 222 65.8
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 1.9e-78 296.6 235 62.6
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 9.3e-78 294.3 237 61.6
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 2.5e-75 286.2 202 67.3
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 2.5e-75 286.2 222 66.2
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 3.3e-75 285.8 191 70.2
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 1.6e-74 283.5 180 73.9
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 4.0e-73 278.9 246 60.6
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.1e-70 270.8 210 59.5
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.1e-70 270.8 217 63.6
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 2.5e-70 269.6 205 63.9
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.4e-65 253.8 194 62.4
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 1.1e-62 244.2 214 55.6
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 1.8e-57 226.9 218 53.2
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 4.1e-57 225.7 199 54.8
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 2.0e-56 223.4 205 51.7
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 4.5e-56 222.2 171 64.3
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 5.9e-56 221.9 162 69.1
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 3.2e-54 216.1 159 63.5
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 2.7e-53 213.0 190 54.7
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 6.1e-53 211.8 153 66.7
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 6.7e-52 208.4 121 86.8
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 9.1e-49 198.0 135 66.7
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 1.7e-47 193.7 249 45.4
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 3.8e-47 192.6 221 46.2
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 5.3e-41 172.2 106 72.6
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.3e-39 167.5 172 55.2
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 9.7e-35 151.4 107 67.3
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.6e-32 143.3 147 55.1
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 2.5e-30 136.7 126 56.3
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 4.2e-30 136.0 80 78.8
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 7.5e-27 125.2 141 50.4
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 4.1e-25 119.4 200 36.5
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 1.6e-16 90.9 78 59.0
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 1.8e-12 77.4 93 48.4


User provided reference genes

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