Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0096300 Rhododendron simsii HOM05D008392 ORTHO05D010441 9.8e-184 646.7 343 100.0
vmacro01573 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.4e-118 430.3 360 66.4
Actinidia35516 Actinidia chinensis HOM05D008392 ORTHO05D010441 4.1e-81 305.8 366 52.7
Dinv24467 Davidia involucrata HOM05D008392 ORTHO05D010441 6.5e-79 298.5 387 48.3
TAR362G1147 Trochodendron aralioides HOM05D001261 ORTHO05D010441 4.3e-46 189.5 423 35.2
Nitab4.5_0004525g0010 Nicotiana tabacum HOM05D008392 ORTHO05D010441 4.0e-44 183.0 326 39.0
Oeu053741.2 Olea europaea HOM05D008392 ORTHO05D010441 9.8e-43 178.3 284 38.7
Cc02_g35180 Coffea canephora HOM05D008392 ORTHO05D010441 6.4e-42 175.6 370 34.3
CAN.G1076.23 Capsicum annuum HOM05D008392 ORTHO05D010441 1.4e-41 174.5 344 37.2
Peaxi162Scf01061g00127 Petunia axillaris HOM05D008392 ORTHO05D010441 2.7e-40 170.2 379 36.1
Solyc01g100620.3 Solanum lycopersicum HOM05D008392 ORTHO05D010441 1.0e-39 168.3 329 36.2
Nitab4.5_0001338g0070 Nicotiana tabacum HOM05D008392 ORTHO05D010441 1.3e-39 167.9 350 34.9
Sopen01g044120 Solanum pennellii HOM05D008392 ORTHO05D010441 5.6e-38 162.5 367 33.5
SalBow7G4279 Salvia bowleyana HOM05D008392 ORTHO05D010441 8.3e-34 148.7 330 34.2
DCAR_005422 Daucus carota HOM05D008392 ORTHO05D010441 1.1e-33 148.3 399 33.1
Actinidia16864 Actinidia chinensis HOM05D008392 ORTHO05D010441 7.8e-32 142.1 221 46.6
CANSAT54G2036 Cannabis sativa HOM05D008392 ORTHO05D010441 7.8e-32 142.1 273 37.7
Lsat_1_v5_gn_5_40160 Lactuca sativa HOM05D008392 ORTHO05D010441 1.3e-31 141.4 274 38.0
QL03p014198 Quercus lobata HOM05D008392 ORTHO05D010441 3.0e-31 140.2 368 32.1
DCAR_025288 Daucus carota HOM05D008392 ORTHO05D010441 7.3e-30 135.6 268 37.3
SGA_v2.0_scaffold4G01973 Striga asiatica HOM05D008392 ORTHO05D010441 1.3e-26 124.8 266 38.0
Nn5g30235 Nelumbo nucifera HOM05D001261 ORTHO05D010441 2.2e-26 124.0 371 31.3
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 4.9e-26 122.9 303 32.3
Actinidia16865 Actinidia chinensis HOM05D008392 ORTHO05D010441 7.8e-24 115.5 112 58.0
Lj1g0008102 Lotus japonicus HOM05D008392 ORTHO05D010441 1.5e-22 111.3 333 30.9
Migut.B00948 Erythranthe guttata HOM05D008392 ORTHO05D010441 7.3e-22 109.0 193 38.3
Lalb_Chr19g0129211 Lupinus albus HOM05D008392 ORTHO05D010441 2.1e-21 107.5 265 34.7
Aqoxy2G02705 Aquilegia oxysepala HOM05D001261 ORTHO05D010441 1.8e-20 104.4 338 30.2
Prupe.6G312100 Prunus persica HOM05D008392 ORTHO05D010441 4.0e-20 103.2 260 35.8
Lj5g0025247 Lotus japonicus HOM05D008392 ORTHO05D010441 1.5e-19 101.3 281 31.0
Glyma.20G096200 Glycine max HOM05D008392 ORTHO05D010441 7.6e-19 99.0 327 29.1
MBI19_g03251_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 7.6e-19 99.0 132 45.5
arahy.Tifrunner.gnm1.ann1.S3TC9P Arachis hypogaea HOM05D008392 ORTHO05D010441 9.9e-19 98.6 270 30.4
Phvul.007G202100 Phaseolus vulgaris HOM05D008392 ORTHO05D010441 1.3e-18 98.2 270 30.7
arahy.Tifrunner.gnm1.ann1.DRX87E Arachis hypogaea HOM05D008392 ORTHO05D010441 2.2e-18 97.4 227 31.7
VMungo0720G2188 Vigna mungo HOM05D008392 ORTHO05D010441 2.9e-18 97.1 268 31.3
MD04G1192900 Malus domestica HOM05D008392 ORTHO05D010441 1.4e-17 94.7 274 33.2
Psat6g152960 Pisum sativum HOM05D008392 ORTHO05D010441 1.9e-17 94.4 290 30.0
MD12G1204900 Malus domestica HOM05D008392 ORTHO05D010441 7.1e-17 92.4 251 33.5
Psat6g152920 Pisum sativum HOM05D008392 ORTHO05D010441 9.3e-17 92.0 314 30.3
MD12G1205000 Malus domestica HOM05D008392 ORTHO05D010441 2.7e-16 90.5 278 30.6
Ca_10178_v3 Cicer arietinum L. HOM05D008392 ORTHO05D010441 6.0e-16 89.4 324 27.2
Medtr5g095070 Medicago truncatula HOM05D008392 ORTHO05D010441 6.0e-16 89.4 233 33.9
Lalb_Chr06g0167451 Lupinus albus HOM05D008392 ORTHO05D010441 1.0e-15 88.6 281 31.3
RcHm_v2.0_Chr3g0457251 Rosa chinensis HOM05D008392 ORTHO05D010441 6.6e-15 85.9 350 26.3
Medtr5g080030 Medicago truncatula HOM05D008392 ORTHO05D010441 1.9e-14 84.3 245 32.2
ATR0693G224 Amborella trichopoda HOM05D001261 ORTHO05D001130 1.3e-13 81.6 313 27.2
CDE08G0491 Ceratophyllum demersum HOM05D008392 ORTHO05D010441 2.1e-13 80.9 212 31.1
unitig_21.g20260 Utricularia gibba HOM05D001261 ORTHO05D001130 4.0e-12 76.6 221 29.4
Ca_14139_v3 Cicer arietinum L. HOM05D001261 ORTHO05D001130 3.8e-10 70.1 228 28.5
Mapoly0043s0128 Marchantia polymorpha HOM05D001261 ORTHO05D001130 1.4e-09 68.2 78 44.9
Rhsim04G0007700 Rhododendron simsii HOM05D001261 ORTHO05D001130 1.9e-09 67.8 230 25.2
Glyma.04G113000 Glycine max HOM05D001261 ORTHO05D001130 3.2e-09 67.0 215 27.9
SEGI_03044 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 3.2e-09 67.0 108 33.3
TPR.G8444 Trifolium pratense HOM05D008392 ORTHO05D010441 3.2e-09 67.0 173 34.1
vmacro09799 Vaccinium macrocarpon HOM05D001261 ORTHO05D001130 3.2e-09 67.0 249 25.3
MSTRG.13044 Avicennia marina HOM05D001261 ORTHO05D001130 2.1e-08 64.3 229 27.9
Pp3c7_23660 Physcomitrium patens HOM05D001261 ORTHO05D001130 2.1e-08 64.3 81 40.7
unitig_744.g24498 Utricularia gibba HOM05D001261 ORTHO05D001130 2.7e-08 63.9 221 28.5
Actinidia03674 Actinidia chinensis HOM05D001261 ORTHO05D001130 4.6e-08 63.2 231 28.1
CiPaw.11G210600 Carya illinoinensis HOM05D001261 ORTHO05D001130 4.6e-08 63.2 224 25.9
Lalb_Chr18g0048641 Lupinus albus HOM05D001261 ORTHO05D001130 6.0e-08 62.8 228 25.0
CSS0050103 Camellia sinensis var. sinensis HOM05D001261 ORTHO05D001130 7.9e-08 62.4 210 26.7
Cfa016960 Carpinus fangiana HOM05D001261 ORTHO05D001130 7.9e-08 62.4 283 25.8
Thecc.07G001600 Theobroma cacao HOM05D001261 ORTHO05D001130 7.9e-08 62.4 301 26.2
Duzib268G0395 Durio zibethinus HOM05D001261 ORTHO05D001130 1.3e-07 61.6 224 25.4
CDE03G0487 Ceratophyllum demersum HOM05D001261 ORTHO05D001130 1.8e-07 61.2 227 26.9
FvH4_6g07580 Fragaria vesca HOM05D008392 ORTHO05D010441 1.8e-07 61.2 332 25.0
SGA_v2.0_scaffold57G20102 Striga asiatica HOM05D001261 ORTHO05D001130 1.8e-07 61.2 283 26.9
Lj5g0016874 Lotus japonicus HOM05D001261 ORTHO05D001130 3.9e-07 60.1 250 25.2
Phvul.005G004300 Phaseolus vulgaris HOM05D001261 ORTHO05D001130 3.9e-07 60.1 242 27.3
COL.COLO4_07788 Corchorus olitorius HOM05D001261 ORTHO05D001130 5.1e-07 59.7 229 26.2
Potri.011G168800 Populus trichocarpa HOM05D001261 ORTHO05D001130 5.1e-07 59.7 300 24.3
SalBow8G3132 Salvia bowleyana HOM05D001261 ORTHO05D001130 5.1e-07 59.7 225 25.8
SEGI_38962 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 5.1e-07 59.7 97 37.1
Atru.chr4.1702 Acer truncatum HOM05D001261 ORTHO05D001130 6.7e-07 59.3 235 24.3
Ciclev10008919m.g Citrus clementina HOM05D001261 ORTHO05D001130 6.7e-07 59.3 225 28.0
SEGI_21670 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 6.7e-07 59.3 240 24.6
SEGI_22736 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 6.7e-07 59.3 265 23.8
PGSC0003DMG402018896 Solanum tuberosum HOM05D001261 ORTHO05D001130 6.7e-07 59.3 231 26.8
EL10Ac3g07478 Beta vulgaris HOM05D001261 ORTHO05D001130 8.7e-07 58.9 237 23.6
Migut.G00695 Erythranthe guttata HOM05D001261 ORTHO05D001130 8.7e-07 58.9 251 25.1
Manes.05G204800 Manihot esculenta HOM05D001261 ORTHO05D001130 8.7e-07 58.9 270 25.2
SGA_v2.0_scaffold92G28174 Striga asiatica HOM05D001261 ORTHO05D001130 1.1e-06 58.5 233 27.0
Aqoxy5G01079 Aquilegia oxysepala HOM05D001261 ORTHO05D001130 1.5e-06 58.2 229 24.9
arahy.Tifrunner.gnm1.ann1.1C5WUF Arachis hypogaea HOM05D001261 ORTHO05D001130 1.5e-06 58.2 220 25.0
ECA232G0527 Erigeron canadensis HOM05D001261 ORTHO05D001130 1.5e-06 58.2 256 26.2
Migut.H01714 Erythranthe guttata HOM05D001261 ORTHO05D001130 1.5e-06 58.2 230 26.1
MD03G1042900 Malus domestica HOM05D001261 ORTHO05D001130 1.5e-06 58.2 273 24.5
Potri.004G124000 Populus trichocarpa HOM05D003321 ORTHO05D005161 1.5e-06 58.2 87 35.6
FAN05G3611 Fragaria x ananassa HOM05D008392 ORTHO05D010441 1.9e-06 57.8 333 24.3
HanXRQChr04g0114861 Helianthus annuus HOM05D001261 ORTHO05D001130 1.9e-06 57.8 78 39.7
SMO367G0741 Selaginella moellendorffii HOM05D001261 ORTHO05D001130 1.9e-06 57.8 238 23.5
THA.LOC104810304 Tarenaya hassleriana HOM05D001261 ORTHO05D001130 1.9e-06 57.8 215 26.5
arahy.Tifrunner.gnm1.ann1.J9QP8S Arachis hypogaea HOM05D001261 ORTHO05D001130 2.5e-06 57.4 256 23.4
CiPaw.12G142500 Carya illinoinensis HOM05D001261 ORTHO05D001130 3.3e-06 57.0 256 25.0
Cc05_g15700 Coffea canephora HOM05D001261 ORTHO05D001130 3.3e-06 57.0 223 23.3
ECA238G1605 Erigeron canadensis HOM05D001261 ORTHO05D001130 3.3e-06 57.0 81 38.3
Glyma.06G321700 Glycine max HOM05D001261 ORTHO05D001130 3.3e-06 57.0 243 24.7
PGR142G0788 Punica granatum HOM05D003321 ORTHO05D005161 3.3e-06 57.0 84 35.7
SEGI_34433 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 3.3e-06 57.0 78 38.5
HanXRQChr14g0435981 Helianthus annuus HOM05D001261 ORTHO05D001130 4.3e-06 56.6 78 38.5
Pp3c1_33100 Physcomitrium patens HOM05D001261 ORTHO05D001130 4.3e-06 56.6 113 31.9
SMO367G0512 Selaginella moellendorffii HOM05D001261 ORTHO05D001130 4.3e-06 56.6 223 25.1
Solyc12g094440.2 Solanum lycopersicum HOM05D001261 ORTHO05D001130 4.3e-06 56.6 205 25.9
Nitab4.5_0003570g0010 Nicotiana tabacum HOM05D001261 ORTHO05D001130 5.6e-06 56.2 230 27.0
SEGI_16568 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 5.6e-06 56.2 82 32.9
TWI73G1259 Tripterygium wilfordii HOM05D001261 ORTHO05D001130 5.6e-06 56.2 256 23.8
ATR0661G320 Amborella trichopoda HOM05D001261 ORTHO05D001130 7.4e-06 55.8 242 24.8
MSTRG.14524 Avicennia marina HOM05D001261 ORTHO05D001130 7.4e-06 55.8 226 21.7
Eucgr.H00052 Eucalyptus grandis HOM05D001261 ORTHO05D001130 7.4e-06 55.8 82 35.4
Medtr1g084150 Medicago truncatula HOM05D008392 ORTHO05D010441 7.4e-06 55.8 181 25.4
TPR.G38136 Trifolium pratense HOM05D001261 ORTHO05D001130 7.4e-06 55.8 253 25.3
Actinidia17023 Actinidia chinensis HOM05D001261 ORTHO05D001130 9.6e-06 55.5 205 24.9
CANSAT78G1324 Cannabis sativa HOM05D001261 ORTHO05D001130 9.6e-06 55.5 79 34.2
Cpa.g.sc12.68 Carica papaya HOM05D001261 ORTHO05D001130 9.6e-06 55.5 261 26.4
FAN07G2115 Fragaria x ananassa HOM05D001261 ORTHO05D001130 9.6e-06 55.5 79 35.4
FAN12G3417 Fragaria x ananassa HOM05D001261 ORTHO05D001130 9.6e-06 55.5 79 35.4
FAN17G1455 Fragaria x ananassa HOM05D001261 ORTHO05D001130 9.6e-06 55.5 79 35.4
FAN22G0086 Fragaria x ananassa HOM05D001261 ORTHO05D001130 9.6e-06 55.5 79 35.4
Hma1.2p1_0383F.1_g140260 Hydrangea macrophylla HOM05D001261 ORTHO05D001130 9.6e-06 55.5 79 36.7
THA.LOC104822702 Tarenaya hassleriana HOM05D001261 ORTHO05D001130 9.6e-06 55.5 302 25.2


User provided reference genes

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