Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0045100 Rhododendron simsii HOM05D004363 ORTHO05D005110 5.7e-74 280.8 138 100.0
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 2.4e-64 248.8 138 87.0
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 4.4e-42 174.9 147 63.3
Hma1.2p1_0064F.1_g034600 Hydrangea macrophylla HOM05D004363 ORTHO05D005110 1.3e-41 173.3 147 59.2
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 2.2e-41 172.6 115 76.5
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 3.7e-41 171.8 147 60.5
TAR623G0254 Trochodendron aralioides HOM05D004363 ORTHO05D005110 4.8e-41 171.4 155 58.1
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.1e-40 170.2 155 58.1
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 2.4e-40 169.1 155 57.4
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 5.4e-40 167.9 147 58.5
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 1.2e-39 166.8 147 58.5
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 2.5e-37 159.1 150 57.3
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 4.2e-37 158.3 144 60.4
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 7.2e-37 157.5 143 55.2
FAN05G1872 Fragaria x ananassa HOM05D004363 ORTHO05D005110 2.1e-36 156.0 147 57.1
FAN05G3395 Fragaria x ananassa HOM05D004363 ORTHO05D005110 2.1e-36 156.0 147 57.1
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 2.7e-36 155.6 143 54.5
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 3.6e-36 155.2 147 58.5
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 3.6e-36 155.2 146 56.8
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 4.7e-36 154.8 147 56.5
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 6.1e-36 154.5 142 57.7
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 2.3e-35 152.5 153 52.9
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 2.3e-35 152.5 151 54.3
Nitab4.5_0001177g0040 Nicotiana tabacum HOM05D004363 ORTHO05D005110 2.3e-35 152.5 143 55.9
RcHm_v2.0_Chr3g0476311 Rosa chinensis HOM05D004363 ORTHO05D005110 2.3e-35 152.5 146 55.5
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 3.0e-35 152.1 147 56.5
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 3.0e-35 152.1 147 56.5
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 4.0e-35 151.8 143 55.2
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 5.2e-35 151.4 146 53.4
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 6.8e-35 151.0 144 56.2
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 1.5e-34 149.8 152 50.7
Cpa.g.sc104.13 Carica papaya HOM05D004363 ORTHO05D005110 2.0e-34 149.4 149 53.0
Nitab4.5_0001191g0010 Nicotiana tabacum HOM05D004363 ORTHO05D005110 2.0e-34 149.4 145 53.1
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 2.6e-34 149.1 146 51.4
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 4.4e-34 148.3 146 52.1
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 7.5e-34 147.5 145 54.5
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 9.8e-34 147.1 146 54.8
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 1.3e-33 146.7 146 55.5
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.3e-33 146.7 145 55.2
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 6.3e-33 144.4 146 51.4
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 6.3e-33 144.4 147 53.7
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 1.4e-32 143.3 153 51.6
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 1.4e-32 143.3 149 54.4
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 2.4e-32 142.5 145 51.0
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 2.4e-32 142.5 149 54.4
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 2.4e-32 142.5 142 57.0
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 3.1e-32 142.1 149 53.7
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 4.1e-32 141.7 146 51.4
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 2.0e-31 139.4 147 51.7
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 2.7e-31 139.0 151 51.7
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 2.7e-31 139.0 146 51.4
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 3.5e-31 138.7 154 50.6
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 5.9e-31 137.9 142 52.8
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 7.7e-31 137.5 145 53.1
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 1.0e-30 137.1 149 52.3
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 1.0e-30 137.1 148 52.7
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 1.7e-30 136.3 148 50.0
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 2.3e-30 136.0 150 50.0
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 2.9e-30 135.6 149 52.3
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 2.9e-30 135.6 152 53.3
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 5.0e-30 134.8 149 52.3
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 6.6e-30 134.4 143 49.7
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 8.6e-30 134.0 153 48.4
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 8.6e-30 134.0 150 49.3
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.9e-29 132.9 150 49.3
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 1.9e-29 132.9 150 48.7
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 4.2e-29 131.7 143 49.7
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 4.2e-29 131.7 148 48.6
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 5.5e-29 131.3 149 50.3
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 5.5e-29 131.3 149 50.3
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 9.5e-29 130.6 144 48.6
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 2.1e-28 129.4 149 45.6
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 2.8e-28 129.0 148 48.6
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 6.1e-28 127.9 149 45.0
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.0e-27 127.1 145 46.9
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 2.3e-27 125.9 143 50.3
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 3.0e-27 125.6 138 50.0
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 3.0e-27 125.6 150 49.3
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 1.2e-26 123.6 134 50.0
Ah.07g203610 Amaranthus hybridus HOM05D004363 ORTHO05D005110 2.6e-26 122.5 146 42.5
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 2.6e-26 122.5 143 49.0
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 4.4e-26 121.7 148 44.6
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 1.7e-25 119.8 151 46.4
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 2.9e-25 119.0 151 45.7
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 1.4e-24 116.7 141 44.0
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 1.8e-24 116.3 143 46.2
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 1.8e-24 116.3 143 46.2
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 2.4e-24 115.9 146 45.2
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 3.2e-24 115.5 145 47.6
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 5.4e-24 114.8 145 46.9
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 5.4e-24 114.8 145 46.9
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 7.0e-24 114.4 143 45.5
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 2.7e-23 112.5 143 45.5
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 1.3e-22 110.2 116 47.4
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 2.9e-22 109.0 148 41.9
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 2.9e-22 109.0 119 49.6
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 2.9e-22 109.0 144 44.4
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 3.9e-22 108.6 144 44.4
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 3.9e-22 108.6 142 39.4
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 6.6e-22 107.8 150 41.3
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 4.7e-20 101.7 138 43.5
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 9.8e-18 94.0 152 39.5
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 9.8e-18 94.0 108 45.4
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 8.3e-17 90.9 142 34.5
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 2.7e-15 85.9 185 38.4
SHI08962 Sapria himalayana HOM05D004363 ORTHO05D005110 3.3e-13 79.0 79 43.0
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 6.0e-07 58.2 128 32.8


User provided reference genes

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