Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 1.8e-209 733.4 762 100.0
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 3.0e-60 237.7 574 81.7
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 2.3e-55 221.5 523 81.1
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 2.9e-55 221.1 582 85.6
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 3.3e-54 217.6 582 85.7
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 1.2e-53 215.7 582 80.9
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 1.8e-49 201.8 576 84.7
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 2.0e-48 198.4 576 84.5
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 1.5e-43 182.2 580 74.1
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 2.0e-40 171.8 486 85.2
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 4.6e-40 170.6 499 81.6
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 2.5e-38 164.9 585 71.6
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 4.7e-37 160.6 95 81.1
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 8.0e-37 159.8 491 87.0
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.1e-36 159.5 95 80.0
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.1e-36 159.5 95 80.0
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 4.0e-36 157.5 481 88.6
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 6.8e-36 156.8 95 78.9
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 6.8e-36 156.8 486 82.3
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 1.5e-35 155.6 95 77.9
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 1.5e-35 155.6 95 78.9
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 2.0e-35 155.2 95 77.9
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 3.4e-35 154.5 489 86.9
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 5.8e-35 153.7 95 77.9
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 7.5e-35 153.3 95 77.9
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 7.5e-35 153.3 95 76.8
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 9.8e-35 152.9 95 78.9
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 9.8e-35 152.9 95 76.8
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 9.8e-35 152.9 95 77.9
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 2.2e-34 151.8 95 76.8
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 2.2e-34 151.8 95 73.7
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 2.2e-34 151.8 183 43.7
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 2.9e-34 151.4 95 77.9
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 2.9e-34 151.4 95 76.8
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 3.7e-34 151.0 95 76.8
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 4.9e-34 150.6 95 74.7
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 4.9e-34 150.6 95 73.7
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 6.4e-34 150.2 95 76.8
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 8.3e-34 149.8 95 75.8
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 8.3e-34 149.8 95 71.6
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 1.1e-33 149.4 95 73.7
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 1.4e-33 149.1 95 72.6
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 1.9e-33 148.7 95 72.6
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 2.4e-33 148.3 95 73.7
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 4.1e-33 147.5 95 74.7
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 4.1e-33 147.5 95 74.7
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 5.4e-33 147.1 95 74.7
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 7.0e-33 146.7 95 73.7
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 9.2e-33 146.4 95 74.7
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 9.2e-33 146.4 95 73.7
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 9.2e-33 146.4 485 86.8
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 9.2e-33 146.4 95 72.6
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 2.1e-32 145.2 95 73.7
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 2.7e-32 144.8 95 73.7
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 4.6e-32 144.1 95 72.6
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 6.0e-32 143.7 93 74.2
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 6.0e-32 143.7 93 74.2
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 6.0e-32 143.7 93 74.2
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 6.0e-32 143.7 95 70.5
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 6.0e-32 143.7 95 70.5
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 6.0e-32 143.7 95 70.5
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 6.0e-32 143.7 95 70.5
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 7.8e-32 143.3 95 72.6
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 7.8e-32 143.3 95 70.5
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 1.0e-31 142.9 95 70.5
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 1.3e-31 142.5 92 72.8
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 1.7e-31 142.1 95 70.5
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.7e-31 142.1 95 70.5
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.7e-31 142.1 95 70.5
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.7e-31 142.1 95 70.5
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 1.7e-31 142.1 95 70.5
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 1.7e-31 142.1 95 72.6
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 2.3e-31 141.7 95 69.5
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 2.3e-31 141.7 95 73.7
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 2.3e-31 141.7 95 73.7
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 3.0e-31 141.4 102 66.7
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.0e-31 141.4 95 71.6
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.0e-31 141.4 95 71.6
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 3.9e-31 141.0 95 70.5
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 3.9e-31 141.0 93 72.0
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 5.1e-31 140.6 95 71.6
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 5.1e-31 140.6 95 71.6
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 5.1e-31 140.6 479 81.4
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 5.1e-31 140.6 174 40.2
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 6.6e-31 140.2 95 68.4
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.1e-30 139.4 95 69.5
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 1.5e-30 139.0 95 71.6
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 1.5e-30 139.0 95 71.6
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 5.6e-30 137.1 95 69.5
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 1.3e-23 115.9 79 72.2
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 2.3e-23 115.2 93 62.4
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 8.6e-23 113.2 121 47.1
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 8.6e-23 113.2 75 74.7
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 6.8e-20 103.6 77 63.6
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 2.2e-18 98.6 67 71.6
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 1.1e-17 96.3 173 37.6
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 3.2e-17 94.7 92 47.8
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 3.2e-17 94.7 92 47.8
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 1.6e-16 92.4 93 48.4
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 2.1e-16 92.0 173 32.9
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 6.2e-13 80.5 53 73.6
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 9.0e-12 76.6 85 51.8
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 3.4e-11 74.7 53 60.4
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 4.9e-10 70.9 40 82.5
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.9e-06 58.9 77 48.1
CSS0026566 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 9.6e-06 56.6 92 28.3
CSS0032076 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 9.6e-06 56.6 92 28.3


User provided reference genes

Program Settings