Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0160600 Rhododendron simsii HOM05D028544 ORTHO05D013915 3.0e-84 315.1 154 100.0
Rhsim09G0160800 Rhododendron simsii HOM05D028544 ORTHO05D013915 2.0e-83 312.4 154 98.7
RhsimUnG0058900 Rhododendron simsii HOM05D028544 ORTHO05D013915 4.4e-35 151.8 86 91.9
Rhsim09G0062900 Rhododendron simsii HOM05D028544 ORTHO05D013915 5.4e-25 118.2 82 75.6
Rhsim11G0072400 Rhododendron simsii HOM05D000923 ORTHO05D000720 8.4e-18 94.4 52 84.6
RhsimUnG0233400 Rhododendron simsii HOM05D000906 ORTHO05D000713 6.0e-16 88.2 48 85.4
Rhsim10G0073600 Rhododendron simsii HOM05D003738 ORTHO05D000007 3.3e-14 82.4 49 77.6
Rhsim02G0222700 Rhododendron simsii HOM05D000111 ORTHO05D001334 3.4e-11 72.4 49 67.3
Sopen07g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-10 70.1 103 38.8
Rhsim01G0153300 Rhododendron simsii HOM05D000487 ORTHO05D000405 2.2e-10 69.7 40 82.5
Sopen08g018390 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-10 69.7 103 38.8
Rhsim08G0069300 Rhododendron simsii HOM05D000532 ORTHO05D001528 2.9e-10 69.3 52 63.5
Sopen11g011100 Solanum pennellii HOM05D010988 ORTHO05D000137 2.9e-10 69.3 103 38.8
Sopen02g010110 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-10 68.2 101 38.6
Sopen04g020670 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-09 67.4 103 37.9
Sopen09g007040 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-09 67.4 103 38.8
Sopen01g011990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen01g026060 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen01g026910 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen02g004900 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen02g011170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen02g033300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen02g034340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen03g016290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen03g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen04g008130 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen04g020510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen04g020830 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen04g021700 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen04g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen04g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen05g008880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen05g009730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen05g016200 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen05g021330 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen05g021420 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen06g017460 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen06g034970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen07g002540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen07g025430 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen08g006370 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen08g016750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen08g018380 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen08g023630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen09g007620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen09g010810 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 55 56.4
Sopen09g021990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen09g022710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen10g020120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen10g023070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen10g028080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen11g011440 Solanum pennellii HOM05D000004 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen11g014570 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen12g007580 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen12g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen12g023160 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen12g023730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 103 37.9
Sopen12g032230 Solanum pennellii HOM05D000398 ORTHO05D000551 1.9e-09 66.6 103 37.9
Sopen01g011300 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-09 66.2 103 37.9
Sopen06g018700 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-09 65.9 103 37.9
QL08p041695 Quercus lobata HOM05D000002 ORTHO05D000001 4.2e-09 65.5 49 57.1
CSS0015031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-09 65.1 103 38.8
Sopen05g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-09 65.1 55 52.7
Sopen02g010960 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-09 64.7 103 35.9
Sopen02g012170 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-09 64.7 49 57.1
Sopen04g024180 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-09 64.7 99 37.4
Sopen09g013450 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-09 64.7 49 57.1
Sopen12g023910 Solanum pennellii HOM05D000002 ORTHO05D000001 9.3e-09 64.3 103 36.9
Sopen04g012760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-08 63.9 103 36.9
Sopen05g018780 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 49 55.1
Sopen12g017000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 103 36.9
CSS0005689 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-08 62.8 103 37.9
CSS0013919 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-08 62.0 103 37.9
CSS0047378 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 101 37.6
Oeu010970.1 Olea europaea HOM05D016460 ORTHO05D013915 1.3e-07 60.5 78 42.3
QL03p008741 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-07 60.1 133 30.8
QL08p032395 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-07 60.1 133 30.8
QL12p018234 Quercus lobata HOM05D000002 ORTHO05D000001 5.1e-07 58.5 133 30.8
Sopen04g019260 Solanum pennellii HOM05D004064 ORTHO05D009909 5.1e-07 58.5 45 57.8
MBI19_g00241_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.5e-06 57.0 64 40.6
MBI18_g01503_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.9e-06 56.6 78 35.9
Sopen10g011440 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 56.2 51 51.0
QL05p071275 Quercus lobata HOM05D001821 ORTHO05D013915 3.3e-06 55.8 52 44.2
QL01p053749 Quercus lobata HOM05D000002 ORTHO05D000001 4.3e-06 55.5 41 61.0
Ciclev10026935m.g Citrus clementina HOM05D022373 ORTHO05D013915 7.4e-06 54.7 49 46.9
COL.COLO4_24432 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.6e-06 54.3 141 30.5


User provided reference genes

Program Settings