Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0059600 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.2e-260 901.7 449 100.0
Rhsim01G0162800 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.1e-138 496.5 433 64.4
Rhsim01G0162700 Rhododendron simsii HOM05D009719 ORTHO05D011041 6.3e-114 415.2 449 56.3
Rhsim10G0108400 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.1e-91 341.3 626 36.7
RhsimUnG0114800 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.7e-63 247.7 264 50.8
Rhsim02G0074000 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.8e-61 240.4 285 46.3
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.3e-54 216.9 624 29.2
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 2.5e-46 190.7 202 48.0
Rhsim08G0133000 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.1e-44 185.3 509 31.8
Rhsim05G0131400 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.4e-36 158.3 512 27.7
Rhsim06G0095800 Rhododendron simsii HOM05D011426 ORTHO05D011041 6.8e-36 156.0 517 27.5
Rhsim11G0142500 Rhododendron simsii HOM05D011426 ORTHO05D011041 4.4e-35 153.3 517 27.3
Rhsim01G0005200 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.7e-34 151.4 494 27.3
Rhsim12G0083900 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.1e-29 134.4 459 27.0
Rhsim02G0111600 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.8e-29 134.0 256 37.1
Rhsim07G0149500 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.2e-27 128.6 152 44.1
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 3.2e-25 120.6 505 24.2
vmacro10800 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 2.1e-24 117.9 430 24.7
Rhsim12G0186600 Rhododendron simsii HOM05D011426 ORTHO05D011041 4.6e-24 116.7 191 37.7
RhsimUnG0238600 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.9e-22 111.3 147 42.2
Rhsim09G0072700 Rhododendron simsii HOM05D009719 ORTHO05D011041 4.3e-22 110.2 142 45.8
Rhsim10G0013200 Rhododendron simsii HOM05D009719 ORTHO05D011041 4.3e-22 110.2 142 45.8
Rhsim09G0072800 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.3e-21 108.6 131 44.3
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 1.4e-20 105.1 207 35.7
Rhsim10G0120700 Rhododendron simsii HOM05D011426 ORTHO05D011041 5.8e-19 99.8 181 32.0
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.9e-19 99.0 98 48.0
RhsimUnG0238500 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.9e-17 94.7 129 41.9
CSS0031619 Camellia sinensis var. sinensis HOM05D011426 ORTHO05D011041 2.4e-17 94.4 175 33.1
Rhsim01G0103900 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.6e-16 91.7 132 37.9
Rhsim12G0034100 Rhododendron simsii HOM05D009719 ORTHO05D011041 5.1e-15 86.7 76 50.0
Dinv35899 Davidia involucrata HOM05D007544 ORTHO05D009682 3.3e-14 84.0 480 21.2
Rhsim09G0056600 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.1e-13 81.3 135 37.8
Rhsim12G0073400 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.4e-12 78.6 152 31.6
Dinv09698 Davidia involucrata HOM05D007544 ORTHO05D009682 3.1e-12 77.4 167 29.3
Dinv02312 Davidia involucrata HOM05D007544 ORTHO05D009682 4.0e-12 77.0 188 27.7
Dinv28085 Davidia involucrata HOM05D007544 ORTHO05D009682 9.0e-12 75.9 121 33.1
Dinv33528 Davidia involucrata HOM05D007544 ORTHO05D009682 9.0e-12 75.9 167 28.7
RhsimUnG0215300 Rhododendron simsii HOM05D009719 ORTHO05D011041 9.0e-12 75.9 109 37.6
Dinv00626 Davidia involucrata HOM05D007544 ORTHO05D009682 1.3e-10 72.0 121 32.2
arahy.Tifrunner.gnm1.ann1.MLQS0T Arachis hypogaea HOM05D010233 ORTHO05D010881 2.9e-10 70.9 183 27.9
Rhsim05G0108300 Rhododendron simsii HOM05D009719 ORTHO05D011041 4.9e-10 70.1 106 41.5
RhsimUnG0215400 Rhododendron simsii HOM05D009719 ORTHO05D011041 4.9e-10 70.1 106 41.5
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 7.1e-09 66.2 135 28.1
arahy.Tifrunner.gnm1.ann1.5M52G7 Arachis hypogaea HOM05D009970 ORTHO05D010881 9.3e-09 65.9 125 34.4
arahy.Tifrunner.gnm1.ann1.YJDD6D Arachis hypogaea HOM05D010233 ORTHO05D010881 9.3e-09 65.9 163 28.2
AUR62043170 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.2e-08 65.5 118 33.1
arahy.Tifrunner.gnm1.ann1.PZPM74 Arachis hypogaea HOM05D010233 ORTHO05D010881 1.6e-08 65.1 139 28.8
AUR62000408 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 128 28.9
AUR62011603 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62014237 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62028801 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62030114 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62030619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62033389 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62034832 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62035231 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 124 33.9
AUR62035391 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62040042 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-08 65.1 118 32.2
AUR62005044 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-08 64.7 118 32.2
AUR62006829 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-08 64.7 118 31.4
AUR62025505 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-08 64.7 128 28.9
AUR62034039 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-08 64.7 118 32.2
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 2.1e-08 64.7 123 30.1
AUR62024087 Chenopodium quinoa HOM05D008127 ORTHO05D000898 2.7e-08 64.3 123 29.3
AUR62030064 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.7e-08 64.3 118 32.2
AUR62037412 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.7e-08 64.3 118 32.2
AUR62043619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.7e-08 64.3 117 32.5
AUR62011252 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.5e-08 63.9 118 31.4
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 4.6e-08 63.5 127 30.7
arahy.Tifrunner.gnm1.ann1.V00IF4 Arachis hypogaea HOM05D010233 ORTHO05D010881 6.0e-08 63.2 183 26.2
AUR62009195 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.0e-08 63.2 118 31.4
AUR62033627 Chenopodium quinoa HOM05D008127 ORTHO05D010494 6.0e-08 63.2 123 29.3
AUR62034174 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.0e-08 63.2 118 31.4
AUR62039695 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.0e-08 63.2 118 31.4
Os01g0946800 Oryza sativa ssp. japonica HOM05D059707 ORTHO05D049892 6.0e-08 63.2 118 28.0
Rhsim12G0083800 Rhododendron simsii HOM05D009719 ORTHO05D011041 6.0e-08 63.2 54 53.7
arahy.Tifrunner.gnm1.ann1.1CH4PB Arachis hypogaea HOM05D010233 ORTHO05D010881 7.9e-08 62.8 157 28.7
EL10Ac7g17236 Beta vulgaris HOM05D002461 ORTHO05D000898 7.9e-08 62.8 470 20.6
AUR62003732 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.9e-08 62.8 118 30.5
AUR62006070 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.9e-08 62.8 118 31.4
AUR62007003 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.9e-08 62.8 118 30.5
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 7.9e-08 62.8 136 28.7
AUR62003872 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.0e-07 62.4 118 31.4
AUR62032708 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.0e-07 62.4 123 28.5
AUR62035718 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.0e-07 62.4 118 31.4
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 1.0e-07 62.4 135 28.1
AUR62013325 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.3e-07 62.0 118 30.5
AUR62038800 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.3e-07 62.0 115 30.4
AUR62013878 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-07 61.6 118 30.5
AUR62039905 Chenopodium quinoa HOM05D008127 ORTHO05D000898 1.8e-07 61.6 123 29.3
Rhsim05G0080000 Rhododendron simsii HOM05D003762 ORTHO05D004374 1.8e-07 61.6 42 61.9
AUR62019536 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.0e-07 60.8 117 29.9
AUR62030466 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.0e-07 60.8 125 29.6
AUR62038680 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.0e-07 60.8 123 28.5
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.0e-07 60.8 122 29.5
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 3.0e-07 60.8 105 31.4
arahy.Tifrunner.gnm1.ann1.W9E7KA Arachis hypogaea HOM05D010233 ORTHO05D010881 3.9e-07 60.5 157 28.7
AUR62024626 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.9e-07 60.5 118 29.7
AUR62027923 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.9e-07 60.5 118 29.7
AUR62029710 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.9e-07 60.5 118 31.4
AUR62037963 Chenopodium quinoa HOM05D008127 ORTHO05D010494 3.9e-07 60.5 211 25.6
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 3.9e-07 60.5 136 27.2
arahy.Tifrunner.gnm1.ann1.XV2F0B Arachis hypogaea HOM05D010233 ORTHO05D010881 5.1e-07 60.1 113 32.7
AUR62002495 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.1e-07 60.1 117 30.8
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 5.1e-07 60.1 136 28.7
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 5.1e-07 60.1 136 28.7
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 5.1e-07 60.1 136 28.7
AUR62041478 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.7e-07 59.7 119 28.6
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 8.7e-07 59.3 136 28.7
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 8.7e-07 59.3 136 28.7
Ah.04g154800 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.1e-06 58.9 121 33.1
CSS0025909 Camellia sinensis var. sinensis HOM05D066949 ORTHO05D043282 1.1e-06 58.9 105 32.4
AUR62008234 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.1e-06 58.9 118 29.7
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.1e-06 58.9 136 27.9
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.1e-06 58.9 136 27.9
Ah.01g011110 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-06 58.5 121 33.1
arahy.Tifrunner.gnm1.ann1.1S6XDY Arachis hypogaea HOM05D009970 ORTHO05D010881 1.5e-06 58.5 125 32.8
AUR62002476 Chenopodium quinoa HOM05D008127 ORTHO05D000898 1.5e-06 58.5 112 29.5
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 1.5e-06 58.5 136 27.2
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 1.5e-06 58.5 136 27.9
Ah.01g009910 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.9e-06 58.2 121 33.1
Ah.08g223060 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.9e-06 58.2 121 33.1
Ah.12g060180 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.9e-06 58.2 121 33.1
FvH4_4g05321 Fragaria vesca HOM05D004096 ORTHO05D000898 1.9e-06 58.2 118 29.7
FvH4_7g31230 Fragaria vesca HOM05D000045 ORTHO05D000067 1.9e-06 58.2 118 29.7
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 1.9e-06 58.2 139 27.3
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 2.5e-06 57.8 122 29.5
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 2.5e-06 57.8 135 26.7
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 3.3e-06 57.4 122 29.5
Rhsim05G0160000 Rhododendron simsii HOM05D011344 ORTHO05D016379 3.3e-06 57.4 95 30.5
AUR62033905 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.3e-06 57.0 119 27.7
AUR62002595 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62005650 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62008556 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62008643 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62010442 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62011828 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62013764 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62014771 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62020656 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62024534 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62024696 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62027688 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62029074 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62029947 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62031767 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62033912 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62035885 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62037428 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 118 28.8
AUR62038642 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62039346 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62044062 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
AUR62044283 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-06 56.2 119 27.7
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 7.4e-06 56.2 118 30.5
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 7.4e-06 56.2 137 27.7
arahy.Tifrunner.gnm1.ann1.Q04R2G Arachis hypogaea HOM05D009970 ORTHO05D010881 9.6e-06 55.8 86 37.2
AUR62035966 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.6e-06 55.8 119 27.7


User provided reference genes

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