Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0182900 Rhododendron simsii HOM05D007098 ORTHO05D008793 3.6e-238 828.6 689 100.0
vmacro19257 Vaccinium macrocarpon HOM05D007098 ORTHO05D008793 5.0e-147 525.8 587 91.5
Hma1.2p1_0014F.1_g009950 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 1.5e-111 407.9 581 82.4
Dinv11119 Davidia involucrata HOM05D002040 ORTHO05D002502 2.0e-111 407.5 584 76.5
Actinidia16202 Actinidia chinensis HOM05D007098 ORTHO05D008793 1.3e-110 404.8 588 79.1
FAN13G2898 Fragaria x ananassa HOM05D007098 ORTHO05D008793 1.8e-107 394.4 561 84.0
Haze_07291 Corylus avellana HOM05D007098 ORTHO05D008793 3.3e-106 390.2 585 80.0
QL10p005624 Quercus lobata HOM05D007098 ORTHO05D008793 1.6e-105 387.9 584 80.0
Cfa018906 Carpinus fangiana HOM05D007098 ORTHO05D008793 1.1e-104 385.2 555 83.1
FvH4_5g07010 Fragaria vesca HOM05D007098 ORTHO05D008793 1.1e-104 385.2 561 83.2
FAN18G2243 Fragaria x ananassa HOM05D007098 ORTHO05D008793 5.3e-104 382.9 561 82.9
CiPaw.11G013600 Carya illinoinensis HOM05D007098 ORTHO05D008793 1.5e-103 381.3 583 79.1
MD06G1160200 Malus domestica HOM05D007098 ORTHO05D008793 2.6e-103 380.6 574 80.3
RcHm_v2.0_Chr7g0191671 Rosa chinensis HOM05D007098 ORTHO05D008793 2.9e-102 377.1 561 82.2
Manes.06G113500 Manihot esculenta HOM05D007098 ORTHO05D008793 1.1e-101 375.2 585 73.8
CSS0030055 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 1.3e-99 368.2 230 73.5
EL10Ac7g18049 Beta vulgaris HOM05D007098 ORTHO05D008793 1.8e-99 367.9 548 82.3
Cpa.g.sc4.42 Carica papaya HOM05D007098 ORTHO05D008793 2.3e-99 367.5 577 78.5
FAN04G0983 Fragaria x ananassa HOM05D007098 ORTHO05D008793 6.7e-99 365.9 561 69.9
TWI39G0887 Tripterygium wilfordii HOM05D007098 ORTHO05D008793 5.7e-98 362.8 556 79.7
CSS0038177 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 1.6e-97 361.3 549 79.6
Nn5g28372 Nelumbo nucifera HOM05D007098 ORTHO05D008793 1.6e-97 361.3 573 79.6
Gorai.001G062100 Gossypium raimondii HOM05D007098 ORTHO05D008793 6.3e-97 359.4 605 75.0
Gohir.D07G058600 Gossypium hirsutum HOM05D007098 ORTHO05D008793 1.4e-96 358.2 582 77.0
Sabra12G0066500 Salix brachista HOM05D007098 ORTHO05D008793 1.8e-96 357.8 580 77.6
GSVIVG01007576001 Vitis vinifera HOM05D007098 ORTHO05D008793 3.1e-96 357.1 576 79.2
Thecc.03G120500 Theobroma cacao HOM05D007098 ORTHO05D008793 4.1e-96 356.7 572 79.2
Potri.012G091800 Populus trichocarpa HOM05D007098 ORTHO05D008793 6.9e-96 355.9 552 80.1
Gohir.A07G054300 Gossypium hirsutum HOM05D007098 ORTHO05D008793 9.0e-96 355.5 582 76.6
ClCG03G003340 Citrullus lanatus HOM05D007098 ORTHO05D008793 2.0e-95 354.4 575 77.0
Ah.08g218330 Amaranthus hybridus HOM05D007098 ORTHO05D008793 2.6e-95 354.0 555 80.4
TAR371G0113 Trochodendron aralioides HOM05D007098 ORTHO05D008793 2.9e-94 350.5 583 78.2
Atru.chr9.986 Acer truncatum HOM05D007098 ORTHO05D008793 3.8e-94 350.1 553 80.5
Ciclev10019054m.g Citrus clementina HOM05D007098 ORTHO05D008793 3.8e-94 350.1 574 78.0
Sed0010608 Sechium edule HOM05D007098 ORTHO05D008793 1.9e-93 347.8 587 76.3
CsaV3_1G009150 Cucumis sativus L. HOM05D007098 ORTHO05D008793 2.5e-93 347.4 569 73.6
HanXRQChr09g0272771 Helianthus annuus HOM05D007098 ORTHO05D008793 2.5e-93 347.4 556 77.0
Prupe.5G160200 Prunus persica HOM05D007098 ORTHO05D008793 7.9e-92 342.4 578 77.7
MBI11_g46348_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 1.3e-91 341.7 580 77.8
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 5.1e-91 339.7 559 72.8
AUR62025750 Chenopodium quinoa HOM05D007098 ORTHO05D008793 3.3e-90 337.0 590 75.4
PGSC0003DMG400015232 Solanum tuberosum HOM05D007098 ORTHO05D008793 4.3e-90 336.7 571 76.0
MSTRG.9703 Avicennia marina HOM05D007098 ORTHO05D008793 9.7e-90 335.5 591 74.5
AUR62001258 Chenopodium quinoa HOM05D007098 ORTHO05D008793 9.7e-90 335.5 590 76.1
Dinv38489 Davidia involucrata HOM05D007098 ORTHO05D008793 1.3e-89 335.1 231 66.7
Cc04_g10690 Coffea canephora HOM05D007098 ORTHO05D008793 8.2e-89 332.4 590 73.9
THA.LOC104824999 Tarenaya hassleriana HOM05D007098 ORTHO05D008793 1.8e-88 331.3 567 72.8
Duzib205G2031 Durio zibethinus HOM05D007098 ORTHO05D008793 2.0e-87 327.8 575 76.5
Lj2g0008135 Lotus japonicus HOM05D007098 ORTHO05D008793 3.8e-86 323.6 562 76.5
Carub.0008s1032 Capsella rubella HOM05D007098 ORTHO05D008793 5.0e-86 323.2 561 76.3
MELO3C002322.2 Cucumis melo HOM05D007098 ORTHO05D008793 8.5e-86 322.4 565 74.3
Lalb_Chr10g0098821 Lupinus albus HOM05D007098 ORTHO05D008793 7.2e-85 319.3 584 74.3
Peaxi162Scf00089g00927 Petunia axillaris HOM05D007098 ORTHO05D008793 9.4e-85 318.9 549 78.9
CANSAT80G2237 Cannabis sativa HOM05D007098 ORTHO05D008793 1.8e-83 314.7 586 76.3
PSO063G4104 Papaver somniferum HOM05D007098 ORTHO05D008793 1.8e-83 314.7 547 78.6
PSO782G3618 Papaver somniferum HOM05D007098 ORTHO05D008793 2.3e-83 314.3 594 73.9
Aa31LG3G5960 Aethionema arabicum HOM05D007098 ORTHO05D008793 3.0e-83 313.9 545 77.6
AT5G50280 Arabidopsis thaliana HOM05D007098 ORTHO05D008793 3.9e-83 313.5 596 72.7
arahy.Tifrunner.gnm1.ann1.RHK9HC Arachis hypogaea HOM05D007098 ORTHO05D008793 8.8e-83 312.4 590 73.7
arahy.Tifrunner.gnm1.ann1.PW5CDL Arachis hypogaea HOM05D007098 ORTHO05D008793 5.7e-82 309.7 590 73.6
Thhalv10012796m.g Eutrema salsugineum HOM05D007098 ORTHO05D008793 1.3e-81 308.5 620 70.0
Glyma.12G037500 Glycine max HOM05D007098 ORTHO05D008793 1.3e-81 308.5 547 77.0
Lj5A101T108 Lonicera japonica HOM05D007098 ORTHO05D008793 6.3e-81 306.2 250 58.8
Sp6g12370 Schrenkiella parvula HOM05D007098 ORTHO05D008793 1.4e-80 305.1 588 71.8
CARHR258300 Cardamine hirsuta HOM05D007098 ORTHO05D008793 2.4e-80 304.3 629 68.4
AL8G24320 Arabidopsis lyrata HOM05D007098 ORTHO05D008793 3.1e-80 303.9 543 76.2
Glyma.11G111200 Glycine max HOM05D007098 ORTHO05D008793 9.1e-80 302.4 548 76.5
A03p27750 Brassica napus HOM05D007098 ORTHO05D008793 1.5e-79 301.6 620 65.3
Sopen03g030770 Solanum pennellii HOM05D007098 ORTHO05D008793 2.6e-79 300.8 569 75.2
BolC3t15668H Brassica oleracea HOM05D007098 ORTHO05D008793 1.3e-78 298.5 556 69.8
BraA03t11986Z Brassica rapa HOM05D007098 ORTHO05D008793 1.7e-78 298.1 621 65.5
BcaC01g04822 Brassica carinata HOM05D007098 ORTHO05D008793 2.2e-78 297.7 620 65.3
Nitab4.5_0001360g0150 Nicotiana tabacum HOM05D007098 ORTHO05D008793 2.2e-78 297.7 551 77.0
C03p33470 Brassica napus HOM05D007098 ORTHO05D008793 3.8e-78 297.0 621 65.2
BcaB01g02904 Brassica carinata HOM05D007098 ORTHO05D008793 5.0e-78 296.6 541 71.0
CDE09G0597 Ceratophyllum demersum HOM05D007098 ORTHO05D008793 5.0e-78 296.6 202 66.8
Sc22g0003940 Simmondsia chinensis HOM05D007098 ORTHO05D008793 8.5e-78 295.8 534 79.0
Eucgr.B00165 Eucalyptus grandis HOM05D007098 ORTHO05D008793 1.1e-77 295.4 506 82.2
Nitab4.5_0006717g0020 Nicotiana tabacum HOM05D007098 ORTHO05D008793 4.2e-77 293.5 571 74.4
Phvul.011G039200 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 5.5e-77 293.1 547 74.2
Hund21512 Selenicereus undatus HOM05D007098 ORTHO05D008793 1.2e-76 292.0 229 60.7
Migut.D02039 Erythranthe guttata HOM05D007098 ORTHO05D008793 1.6e-76 291.6 562 74.0
Glyma.02G116500 Glycine max HOM05D007098 ORTHO05D008793 2.1e-76 291.2 579 72.2
TPR.G24468 Trifolium pratense HOM05D007098 ORTHO05D008793 1.8e-75 288.1 542 76.9
Lsat_1_v5_gn_4_78280 Lactuca sativa HOM05D007098 ORTHO05D008793 3.9e-75 287.0 576 69.1
Psat2g130240 Pisum sativum HOM05D007098 ORTHO05D008793 2.6e-74 284.3 544 76.7
ECA232G2468 Erigeron canadensis HOM05D001195 ORTHO05D001138 3.3e-74 283.9 202 62.4
Solyc03g111650.4 Solanum lycopersicum HOM05D007098 ORTHO05D008793 3.7e-73 280.4 569 56.4
VMungo1215G0824 Vigna mungo HOM05D007098 ORTHO05D008793 5.3e-72 276.6 203 60.1
Medtr5g045490 Medicago truncatula HOM05D007098 ORTHO05D008793 5.9e-71 273.1 575 73.0
SalBow1G0423 Salvia bowleyana HOM05D007098 ORTHO05D008793 1.7e-70 271.6 546 68.1
Phvul.003G042600 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 1.1e-69 268.9 202 58.9
ATR0824G168 Amborella trichopoda HOM05D007098 ORTHO05D008793 5.5e-69 266.5 553 74.0
arahy.Tifrunner.gnm1.ann1.L7HRZC Arachis hypogaea HOM05D007098 ORTHO05D008793 2.1e-68 264.6 247 52.2
VMungo1127G2011 Vigna mungo HOM05D007098 ORTHO05D008793 3.6e-68 263.8 203 58.1
CAN.G472.49 Capsicum annuum HOM05D007098 ORTHO05D008793 1.3e-57 228.8 491 79.0
Ca_04973_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 3.1e-56 224.2 200 54.0
SEGI_05165 Sequoiadendron giganteum HOM05D007098 ORTHO05D008793 2.3e-54 218.0 209 48.8
HPP92_024236 Vanilla planifolia HOM05D007098 ORTHO05D008793 2.9e-54 217.6 503 75.3
Glyma.01G059100 Glycine max HOM05D007098 ORTHO05D008793 1.2e-50 205.7 508 75.6
Os05g0294600 Oryza sativa ssp. japonica HOM05D007098 ORTHO05D008793 7.0e-48 196.4 544 67.3
Cpa.g.sc4.27 Carica papaya HOM05D006000 ORTHO05D008793 3.1e-35 154.5 121 56.2
Ca_26530_v3 Cicer arietinum L. HOM05D005706 ORTHO05D008793 1.0e-30 139.4 100 66.0
Mapoly0023s0082 Marchantia polymorpha HOM05D007098 ORTHO05D008793 1.4e-27 129.0 202 31.7
Lj5C101T15 Lonicera japonica HOM05D007098 ORTHO05D008793 4.4e-26 124.0 85 70.6
DCAR_021600 Daucus carota HOM05D007098 ORTHO05D008793 1.3e-25 122.5 80 73.8
Duzib084G0201 Durio zibethinus HOM05D007098 ORTHO05D008793 3.0e-22 111.3 85 68.2
Hma1.2p1_0014F.1_g009960 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 4.7e-20 104.0 68 76.5
MBI11_g46065_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 8.1e-20 103.2 75 68.0
AagrBONN_evm.TU.Sc2ySwM_228.5130 Anthoceros agrestis HOM05D007098 ORTHO05D008793 2.4e-19 101.7 196 26.5
Zm00001eb154110 Zea mays HOM05D007098 ORTHO05D008793 1.5e-18 99.0 80 62.5
Ca_30971_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 4.1e-16 90.9 155 36.1
ClCG03G003360 Citrullus lanatus HOM05D007098 ORTHO05D008793 5.8e-10 70.5 48 68.8
arahy.Tifrunner.gnm1.ann1.0Z4KK5 Arachis hypogaea HOM05D007098 ORTHO05D008793 8.4e-09 66.6 63 57.1
Potri.006G166200 Populus trichocarpa HOM05D003056 ORTHO05D003422 1.6e-07 62.4 188 26.6
MD13G1249100 Malus domestica HOM05D003056 ORTHO05D003422 1.3e-06 59.3 164 26.2
Sabra06G0127800 Salix brachista HOM05D003056 ORTHO05D003422 1.3e-06 59.3 164 25.6
Mapoly0029s0090 Marchantia polymorpha HOM05D005862 ORTHO05D021269 3.9e-06 57.8 201 23.9
Rhsim12G0158600 Rhododendron simsii HOM05D003056 ORTHO05D003422 6.6e-06 57.0 145 24.1
Gohir.D12G193200 Gossypium hirsutum HOM05D000001 ORTHO05D000003 8.7e-06 56.6 216 24.1
Hma1.2p1_1303F.1_g274420 Hydrangea macrophylla HOM05D003056 ORTHO05D003422 8.7e-06 56.6 145 24.8
RcHm_v2.0_Chr4g0401161 Rosa chinensis HOM05D003056 ORTHO05D003422 8.7e-06 56.6 164 26.2


User provided reference genes

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