Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 1.0e-234 816.2 381 100.0
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 1.3e-213 746.1 375 92.3
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 6.8e-202 707.2 375 86.1
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.2e-201 706.4 375 86.1
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 2.4e-199 698.7 372 86.0
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 7.7e-198 693.7 385 84.4
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 1.3e-197 693.0 373 82.8
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 1.6e-195 686.0 372 82.3
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 8.9e-194 680.2 372 83.6
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 3.4e-193 678.3 372 81.7
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 2.8e-192 675.2 374 82.1
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 2.8e-192 675.2 372 84.1
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 3.7e-192 674.9 374 79.4
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 3.7e-192 674.9 372 83.1
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 3.7e-192 674.9 372 82.5
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 1.4e-191 672.9 371 82.2
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 1.8e-191 672.5 372 82.3
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 3.1e-191 671.8 368 81.5
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 9.2e-191 670.2 370 81.6
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 1.6e-190 669.5 374 81.3
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 2.0e-190 669.1 372 80.1
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 7.8e-190 667.2 372 81.2
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 8.6e-189 663.7 373 81.5
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 1.5e-188 662.9 372 80.9
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 1.5e-188 662.9 369 80.5
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.5e-188 662.9 373 78.8
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 1.9e-188 662.5 372 81.5
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 1.9e-188 662.5 372 81.7
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 4.3e-188 661.4 371 80.3
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 9.5e-188 660.2 372 79.3
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 9.5e-188 660.2 371 79.2
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 1.2e-187 659.8 371 79.0
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 4.7e-187 657.9 390 76.9
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 6.1e-187 657.5 372 78.8
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 1.0e-186 656.8 371 81.4
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 1.0e-186 656.8 379 78.6
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 3.0e-186 655.2 372 80.6
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 3.0e-186 655.2 372 79.8
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 4.0e-186 654.8 374 78.9
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 4.0e-186 654.8 369 79.9
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 5.2e-186 654.4 371 78.7
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 6.8e-186 654.1 372 80.4
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 1.2e-185 653.3 372 80.9
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 1.2e-185 653.3 372 79.6
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 1.5e-185 652.9 371 79.8
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.0e-185 652.5 371 79.8
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 1.7e-184 649.4 372 78.2
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 6.4e-184 647.5 372 78.5
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 8.3e-184 647.1 371 77.9
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 1.4e-183 646.4 367 78.7
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 1.6e-182 642.9 372 78.0
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 7.8e-182 640.6 382 80.6
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 3.0e-181 638.6 372 76.9
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 3.9e-181 638.3 372 76.9
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 5.0e-181 637.9 373 75.9
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 6.6e-181 637.5 372 76.6
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 8.6e-181 637.1 372 77.2
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 2.5e-180 635.6 372 76.1
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 5.6e-180 634.4 372 77.2
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 2.1e-179 632.5 372 76.9
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 2.8e-179 632.1 371 77.4
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 8.0e-179 630.6 372 77.7
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 1.1e-178 630.2 380 75.0
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 1.4e-178 629.8 369 76.4
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 2.3e-178 629.0 372 75.5
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 2.3e-178 629.0 372 74.5
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 3.1e-178 628.6 372 76.3
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 4.0e-178 628.2 373 76.7
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 5.2e-178 627.9 372 74.7
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 2.6e-177 625.5 376 74.7
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 3.4e-177 625.2 367 76.8
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 4.4e-177 624.8 373 75.3
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 8.3e-176 620.5 372 75.8
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 8.3e-176 620.5 356 79.2
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 2.4e-175 619.0 378 73.3
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 2.4e-175 619.0 367 75.7
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 4.1e-175 618.2 371 76.5
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 9.2e-175 617.1 367 74.1
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 2.1e-174 615.9 372 74.5
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 4.6e-174 614.8 371 73.9
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 4.6e-174 614.8 420 69.0
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 6.0e-174 614.4 387 74.2
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 7.8e-174 614.0 456 64.7
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 1.3e-173 613.2 372 73.7
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 1.3e-173 613.2 369 73.7
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.3e-173 612.5 348 79.9
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 5.1e-173 611.3 377 72.7
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 1.9e-172 609.4 368 74.2
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 7.3e-172 607.4 370 72.7
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 1.2e-171 606.7 368 73.9
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 1.2e-171 606.7 368 73.9
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 2.1e-171 605.9 370 73.0
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 2.1e-171 605.9 373 73.7
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 1.4e-170 603.2 370 72.4
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 1.8e-170 602.8 367 73.8
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 3.1e-170 602.1 367 73.6
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 3.1e-170 602.1 371 72.8
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 5.2e-170 601.3 372 72.0
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 1.5e-169 599.7 372 74.7
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 1.1e-167 593.6 398 68.6
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 1.9e-167 592.8 375 73.9
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 4.1e-167 591.7 405 68.6
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 3.9e-165 585.1 346 77.2
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 4.3e-164 581.6 372 69.1
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 8.1e-163 577.4 406 67.7
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 6.8e-162 574.3 367 70.3
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 3.4e-161 572.0 370 67.8
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 1.7e-160 569.7 368 70.7
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 2.7e-158 562.4 371 68.5
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 3.6e-155 552.0 358 68.2
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 3.1e-154 548.9 373 67.8
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 1.5e-153 546.6 374 64.2
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 1.3e-152 543.5 369 66.9
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 1.1e-151 540.4 308 81.2
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 3.5e-150 535.4 370 65.7
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 1.3e-149 533.5 371 66.0
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 2.0e-145 519.6 411 60.3
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 3.8e-136 488.8 372 63.2
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 8.4e-136 487.6 293 73.4
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 2.7e-134 482.6 386 60.1
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 6.7e-125 451.4 274 74.5
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 5.0e-112 408.7 345 60.0
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 1.1e-108 397.5 385 52.7
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.8e-107 392.1 250 74.4
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.0e-104 384.4 222 79.3
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 3.9e-101 372.5 215 76.7
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.8e-98 363.6 225 75.6
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 9.1e-98 361.3 372 49.7
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 7.7e-97 358.2 386 47.7
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.5e-92 344.0 384 46.1
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.1e-90 335.9 196 79.6
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 3.8e-88 329.3 404 43.6
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.5e-81 306.2 165 82.4
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 3.2e-74 283.1 170 74.7
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 9.8e-68 261.5 171 73.7
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.6e-49 201.1 476 29.8
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 8.4e-43 178.7 94 81.9
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 4.4e-36 156.4 129 64.3
C05p13090 Brassica napus HOM05D004692 ORTHO05D006291 1.2e-33 148.3 94 72.3
BcaC05g25434 Brassica carinata HOM05D004692 ORTHO05D006291 3.5e-33 146.7 94 71.3
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 1.1e-31 141.7 83 77.1
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 9.6e-31 138.7 92 72.8
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 6.0e-25 119.4 338 28.1
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 2.9e-19 100.5 163 38.0
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 3.0e-16 90.5 157 36.3
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 3.9e-16 90.1 43 90.7
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 7.4e-15 85.9 46 78.3
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 7.4e-15 85.9 47 80.9
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 5.8e-12 76.3 40 82.5
Haze_18551 Corylus avellana HOM05D016865 ORTHO05D022463 2.3e-08 64.3 30 73.3
RcHm_v2.0_Chr4g0407271 Rosa chinensis HOM05D004692 ORTHO05D342244 4.8e-06 56.6 28 82.1


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