Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 1.7e-117 426.0 219 100.0
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 2.8e-91 339.0 207 87.0
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.6e-81 305.8 221 75.6
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 9.3e-79 297.4 221 74.2
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 1.6e-75 286.6 214 72.0
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 1.1e-68 263.8 214 66.4
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 1.1e-68 263.8 211 67.8
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 1.2e-65 253.8 217 65.9
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 7.6e-65 251.1 217 65.0
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 2.9e-64 249.2 215 66.5
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 7.1e-63 244.6 215 64.7
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 1.6e-62 243.4 212 65.6
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 2.5e-60 236.1 210 63.3
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 9.6e-60 234.2 220 62.3
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 1.6e-59 233.4 210 63.3
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 2.1e-59 233.0 213 60.6
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 6.3e-59 231.5 221 60.2
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 8.2e-59 231.1 216 60.6
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 1.1e-58 230.7 209 61.7
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 1.1e-58 230.7 217 60.8
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 1.8e-58 229.9 213 61.0
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 2.4e-58 229.6 208 63.0
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 9.0e-58 227.6 204 63.2
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 9.0e-58 227.6 204 63.2
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 9.0e-58 227.6 204 63.2
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 1.2e-57 227.3 206 63.1
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 1.5e-57 226.9 213 60.1
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 1.5e-57 226.9 213 60.1
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 2.6e-57 226.1 213 61.0
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 2.6e-57 226.1 222 61.3
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 2.6e-57 226.1 209 60.3
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 2.6e-57 226.1 213 60.6
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 7.6e-57 224.6 219 61.6
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 1.3e-56 223.8 215 62.3
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 3.8e-56 222.2 213 60.1
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 3.8e-56 222.2 213 59.6
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 6.5e-56 221.5 212 59.9
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 8.5e-56 221.1 220 55.9
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 8.5e-56 221.1 216 60.6
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 2.5e-55 219.5 214 60.3
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 3.2e-55 219.2 229 53.3
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 3.2e-55 219.2 210 62.4
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 3.2e-55 219.2 213 59.6
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 4.2e-55 218.8 212 60.8
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 1.6e-54 216.9 212 59.9
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 4.6e-54 215.3 215 60.0
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 4.6e-54 215.3 206 60.7
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 1.0e-53 214.2 212 59.4
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.0e-53 214.2 218 54.6
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 3.9e-53 212.2 222 54.1
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.5e-52 210.3 166 71.7
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 1.5e-52 210.3 212 59.4
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.5e-52 210.3 220 53.6
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 9.7e-52 207.6 214 54.2
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 1.3e-51 207.2 242 52.9
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 1.6e-51 206.8 206 57.3
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 2.2e-51 206.5 215 52.6
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 2.8e-51 206.1 215 58.1
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 3.7e-51 205.7 214 53.7
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 4.8e-51 205.3 214 57.9
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 1.1e-50 204.1 215 57.7
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 1.4e-50 203.8 207 58.5
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 2.4e-50 203.0 216 52.3
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 3.1e-50 202.6 155 68.4
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 9.1e-50 201.1 212 50.9
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 9.1e-50 201.1 215 56.7
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 9.1e-50 201.1 207 56.5
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 1.1e-47 194.1 216 55.6
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 1.2e-46 190.7 209 53.6
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 2.1e-46 189.9 230 52.2
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 6.1e-46 188.3 199 53.8
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 1.8e-45 186.8 217 53.5
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 5.1e-45 185.3 211 53.6
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.7e-40 170.2 172 56.4
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 9.7e-36 154.5 84 84.5
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 2.4e-34 149.8 128 59.4
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 2.2e-32 143.3 104 66.3
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 2.2e-32 143.3 91 72.5
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 2.5e-31 139.8 112 66.1
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 6.1e-30 135.2 199 42.7
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.1e-26 124.4 93 71.0
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 5.2e-21 105.5 155 41.9
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 8.5e-16 88.2 61 59.0
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.2e-14 84.3 174 33.9
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 1.5e-12 77.4 142 41.5
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 7.5e-12 75.1 84 39.3
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.3e-11 74.3 82 46.3
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 2.8e-11 73.2 101 36.6
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 2.7e-09 66.6 38 84.2
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 4.5e-09 65.9 38 81.6


User provided reference genes

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