Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 0.0e+00 1445.6 1081 100.0
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 0.0e+00 1156.0 1235 60.6
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 0.0e+00 1155.6 1084 79.4
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 0.0e+00 1078.2 1100 77.9
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 4.6e-304 1048.1 1099 73.7
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 3.4e-299 1031.9 1091 73.1
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 3.8e-298 1028.5 1093 72.9
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.9e-298 1028.1 1098 73.0
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.9e-298 1028.1 1098 73.0
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 4.2e-297 1025.0 1080 74.4
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 6.6e-295 1017.7 1093 71.9
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 1.5e-294 1016.5 1090 72.3
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 3.3e-294 1015.4 1118 71.1
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 5.6e-294 1014.6 1111 72.2
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 9.6e-294 1013.8 1120 70.8
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 9.6e-294 1013.8 1118 70.9
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.3e-293 1013.4 1104 71.6
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.1e-293 1012.7 1088 71.7
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 4.0e-292 1008.4 1118 70.8
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 2.6e-291 1005.7 1096 72.3
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 5.8e-291 1004.6 1084 74.9
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 1.9e-289 999.6 1102 71.7
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 2.4e-289 999.2 1084 73.2
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 4.2e-289 998.4 1085 72.4
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.7e-288 995.7 1083 72.2
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 6.0e-288 994.6 1092 71.1
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 1.3e-287 993.4 1105 71.8
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 5.1e-287 991.5 1086 71.2
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 8.7e-287 990.7 1088 72.0
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.9e-286 989.6 1081 71.0
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 5.6e-286 988.0 1135 69.4
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 5.6e-286 988.0 1102 70.5
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 2.8e-285 985.7 1081 71.5
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 3.7e-285 985.3 1088 71.5
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 3.7e-285 985.3 1084 61.5
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 9.9e-283 977.2 1105 70.3
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 2.2e-282 976.1 1082 70.5
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 2.9e-282 975.7 1093 70.2
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 4.9e-282 974.9 1104 70.3
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 6.4e-282 974.5 1109 71.9
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 6.4e-282 974.5 1102 70.0
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 7.1e-281 971.1 1086 69.7
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 4.6e-280 968.4 1107 71.4
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 3.0e-279 965.7 1086 70.7
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 8.2e-277 957.6 1082 71.7
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.4e-276 956.8 1082 71.6
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 5.3e-276 954.9 1081 70.2
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 6.9e-276 954.5 1101 69.8
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 2.0e-275 953.0 1088 70.3
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 2.6e-275 952.6 1081 73.9
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 5.8e-275 951.4 1081 72.2
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 1.2e-272 943.7 1099 69.2
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 3.5e-272 942.2 1093 70.9
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 6.0e-272 941.4 1084 69.3
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 1.9e-270 936.4 1086 67.6
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 3.3e-270 935.6 1088 69.4
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 9.7e-270 934.1 1087 69.2
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.8e-269 932.6 1067 71.0
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 3.7e-269 932.2 1112 68.5
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 8.2e-269 931.0 1067 70.9
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.3e-266 923.7 1081 69.3
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 6.5e-266 921.4 1078 70.8
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 1.9e-265 919.8 1114 68.6
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 2.5e-265 919.5 1081 69.2
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 3.2e-265 919.1 1083 66.2
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 4.2e-265 918.7 1095 69.6
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 3.9e-263 912.1 1082 69.0
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 6.7e-263 911.4 1091 68.7
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 8.7e-263 911.0 1081 66.3
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.3e-261 907.1 1081 66.2
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 6.3e-261 904.8 1080 68.8
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 1.1e-260 904.0 1088 66.3
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.5e-259 900.2 1079 66.0
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.0e-258 897.5 1091 65.6
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 1.4e-257 893.6 1085 65.8
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 1.4e-255 887.1 1078 70.4
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.8e-255 886.7 1078 70.1
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 1.1e-254 884.0 1089 62.1
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.1e-254 884.0 1102 67.2
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 2.0e-254 883.2 1100 66.5
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 1.1e-252 877.5 1096 61.1
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.0e-250 870.9 1168 47.1
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.3e-250 870.5 1090 66.5
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 1.2e-248 864.0 1084 64.6
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.7e-245 853.6 857 80.0
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 2.2e-245 853.2 485 84.5
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 6.3e-245 851.7 1040 66.0
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.4e-244 850.5 1088 66.6
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 7.7e-243 844.7 1082 64.0
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.5e-241 839.7 824 70.5
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 5.2e-239 832.0 963 75.2
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 2.0e-235 820.1 1087 65.8
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 6.1e-232 808.5 488 77.9
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.2e-231 805.4 489 80.2
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 4.8e-229 798.9 487 78.2
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 2.0e-214 750.4 1016 59.5
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 9.8e-214 748.0 488 74.2
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 1.9e-204 717.2 1072 57.0
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 5.4e-204 715.7 1081 53.4
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.7e-194 684.1 1073 58.9
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.2e-184 651.4 483 66.5
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 8.4e-181 638.6 924 64.4
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.6e-176 624.4 1012 56.0
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.3e-162 577.4 879 67.1
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 3.3e-145 520.4 443 60.9
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 3.2e-140 503.8 1067 44.0
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 5.9e-134 483.0 820 67.4
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 5.2e-130 469.9 484 50.6
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 6.3e-120 436.4 253 79.8
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 1.9e-100 371.7 205 84.4
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 9.5e-100 369.4 872 37.5
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 2.6e-97 361.3 537 38.4
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 3.1e-90 337.8 202 79.7
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 4.4e-89 334.0 707 57.4
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 2.1e-86 325.1 385 51.9
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 6.8e-74 283.5 454 37.0
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 5.8e-73 280.4 381 46.7
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 1.1e-71 276.2 270 56.7
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.6e-67 262.3 871 32.1
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 8.1e-67 260.0 369 47.4
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.1e-66 259.6 167 76.0
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 6.5e-48 197.2 336 40.8
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 2.1e-46 192.2 133 64.7
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 3.0e-45 188.3 112 81.2
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.4e-42 179.5 112 82.1
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 6.9e-42 177.2 99 82.8
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.0e-41 175.6 93 94.6
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 5.8e-41 174.1 191 51.8
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 2.9e-40 171.8 140 63.6
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 5.0e-40 171.0 140 63.6
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 5.7e-36 157.5 93 82.8
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 1.2e-33 149.8 112 70.5
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 7.7e-33 147.1 74 87.8
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 7.7e-33 147.1 140 60.7
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 2.5e-31 142.1 93 75.3
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.5e-28 132.9 82 80.5
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 1.7e-24 119.4 105 62.9
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 5.3e-18 97.8 129 43.4
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 8.5e-16 90.5 119 42.9
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.0e-13 83.6 44 88.6
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.4e-12 78.2 182 47.3
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 1.6e-09 69.7 108 35.2
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.6e-09 68.9 41 80.5
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 1.1e-07 63.5 38 65.8
HanXRQChr06g0176501 Helianthus annuus HOM05D004966 ORTHO05D006199 2.7e-06 58.9 44 65.9


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