Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 6.3e-83 310.8 169 100.0
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 1.4e-61 240.0 169 79.3
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 4.4e-60 235.0 166 73.5
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.4e-58 229.2 170 72.4
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 7.0e-58 227.6 172 76.7
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 4.5e-57 224.9 169 71.6
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 5.9e-57 224.6 170 72.4
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 5.9e-57 224.6 169 73.4
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 73.4
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 71.6
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 70.4
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 72.8
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.7e-56 223.0 168 70.8
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 2.2e-56 222.6 169 73.4
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 2.9e-56 222.2 169 70.4
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 5.0e-56 221.5 175 72.6
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 71.6
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 71.6
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 5.0e-56 221.5 170 72.9
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 6.5e-56 221.1 172 71.5
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.1e-55 220.3 170 73.5
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 1.1e-55 220.3 169 69.8
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 1.5e-55 219.9 169 71.0
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 1.5e-55 219.9 169 72.2
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 1.9e-55 219.5 171 71.3
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 2.5e-55 219.2 169 71.6
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 2.5e-55 219.2 169 69.8
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 2.5e-55 219.2 169 69.2
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 4.2e-55 218.4 169 68.0
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 5.5e-55 218.0 173 71.1
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 5.5e-55 218.0 169 71.0
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 5.5e-55 218.0 169 69.8
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 7.2e-55 217.6 169 69.2
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 7.2e-55 217.6 169 68.0
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 9.4e-55 217.2 169 71.0
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.2e-54 216.9 171 69.0
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.2e-54 216.9 169 68.6
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 1.2e-54 216.9 169 71.6
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 69.8
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 69.2
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 170 70.6
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 68.6
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 69.2
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 2.7e-54 215.7 170 69.4
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.7e-54 215.7 169 68.0
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 2.7e-54 215.7 169 70.4
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 3.6e-54 215.3 169 67.5
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 3.6e-54 215.3 174 71.8
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 3.6e-54 215.3 169 68.0
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 3.6e-54 215.3 169 69.2
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 4.7e-54 214.9 170 70.0
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 4.7e-54 214.9 169 69.2
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 6.1e-54 214.5 169 68.0
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.1e-54 214.5 169 68.6
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 6.1e-54 214.5 169 66.9
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.4e-53 213.4 169 69.2
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 1.4e-53 213.4 169 70.4
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.8e-53 213.0 170 68.2
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 69.2
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 67.6
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 72.4
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 4.0e-53 211.8 169 65.7
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 5.2e-53 211.5 169 69.2
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 8.8e-53 210.7 169 68.0
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 8.8e-53 210.7 169 68.0
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 1.2e-52 210.3 170 68.2
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 1.2e-52 210.3 169 68.0
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.0e-52 209.5 170 67.1
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 2.6e-52 209.1 161 66.5
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 3.3e-52 208.8 170 67.1
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 3.3e-52 208.8 170 67.1
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 3.3e-52 208.8 170 67.1
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 7.5e-52 207.6 165 70.3
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 7.5e-52 207.6 171 69.6
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 9.7e-52 207.2 170 65.9
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 9.7e-52 207.2 170 65.9
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 1.3e-51 206.8 170 67.1
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 2.2e-51 206.1 169 65.7
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 2.2e-51 206.1 170 65.9
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 2.2e-51 206.1 169 65.7
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 2.2e-51 206.1 169 66.9
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.8e-51 205.7 173 67.1
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 2.8e-51 205.7 172 66.3
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 3.7e-51 205.3 169 66.3
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 4.8e-51 204.9 169 68.0
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 6.3e-51 204.5 170 65.9
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.4e-50 203.4 172 65.1
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 1.4e-50 203.4 169 65.7
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 2.4e-50 202.6 171 66.1
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 7.0e-50 201.1 165 66.1
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.2e-49 200.3 169 65.7
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 1.6e-49 199.9 169 63.9
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-49 199.9 169 63.9
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 1.6e-49 199.9 169 63.9
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 2.0e-49 199.5 169 63.9
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 2.0e-49 199.5 170 63.5
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 2.7e-49 199.1 170 62.9
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 2.7e-49 199.1 172 64.0
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 3.5e-49 198.7 169 62.7
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 3.5e-49 198.7 170 62.4
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 4.5e-49 198.4 169 64.5
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 4.5e-49 198.4 171 67.3
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 4.5e-49 198.4 169 66.3
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 5.9e-49 198.0 171 64.3
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 5.9e-49 198.0 169 65.1
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 7.7e-49 197.6 171 64.3
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 7.7e-49 197.6 171 64.3
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 7.7e-49 197.6 171 64.3
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 7.7e-49 197.6 171 64.9
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 1.0e-48 197.2 171 63.7
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 1.0e-48 197.2 169 64.5
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 1.0e-48 197.2 169 64.5
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 1.3e-48 196.8 169 63.3
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 1.7e-48 196.4 169 63.9
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 2.2e-48 196.1 169 63.9
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 3.8e-48 195.3 171 63.2
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 5.0e-48 194.9 170 67.1
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 5.0e-48 194.9 172 63.4
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 8.5e-48 194.1 173 63.6
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 8.5e-48 194.1 170 64.7
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 1.5e-47 193.4 155 69.7
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 2.5e-47 192.6 169 64.5
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 4.2e-47 191.8 162 64.2
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 4.2e-47 191.8 165 63.6
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 7.2e-47 191.0 161 61.5
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 9.4e-47 190.7 170 64.7
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 9.4e-47 190.7 170 63.5
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 2.7e-46 189.1 170 62.9
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 3.6e-46 188.7 169 60.9
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 4.7e-46 188.3 169 62.1
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.3e-45 186.0 169 61.5
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 2.0e-44 183.0 165 61.2
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 3.4e-44 182.2 158 65.2
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 9.8e-44 180.6 172 61.6
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 9.8e-44 180.6 172 61.6
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 2.2e-43 179.5 146 70.5
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 1.8e-42 176.4 170 60.6
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.2e-41 173.7 102 80.4
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.2e-41 173.7 169 61.5
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 2.0e-41 172.9 172 59.3
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 7.7e-41 171.0 171 59.6
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.7e-40 169.9 102 79.4
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 1.1e-39 167.2 170 58.2
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 3.3e-39 165.6 100 78.0
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 8.9e-37 157.5 100 72.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 3.7e-35 152.1 178 51.7
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 1.5e-31 140.2 138 58.7
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.2e-30 137.1 171 47.4
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 5.2e-29 131.7 175 44.6
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 6.8e-29 131.3 167 46.1
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.8e-28 128.3 70 82.9
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 7.5e-28 127.9 136 50.7
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 2.2e-27 126.3 149 50.3
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.2e-27 126.3 174 42.5
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.7e-27 125.6 70 81.4
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 4.9e-27 125.2 174 40.8
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 4.9e-27 125.2 217 42.4
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 2.7e-25 119.4 171 44.4
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 1.1e-21 107.5 164 42.1
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 1.1e-21 107.5 175 44.6
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 2.6e-20 102.8 173 44.5
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.8e-20 101.7 67 74.6
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.5e-15 86.3 81 55.6
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 8.1e-14 81.3 44 81.8
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 6.2e-06 55.1 69 58.0


User provided reference genes

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