Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0197900 Rhododendron simsii HOM05D003673 ORTHO05D004764 2.0e-258 895.2 446 100.0
vmacro04781 Vaccinium macrocarpon HOM05D003673 ORTHO05D004764 1.8e-214 749.2 445 83.6
CSS0042622 Camellia sinensis var. sinensis HOM05D003673 ORTHO05D004764 2.4e-198 695.7 455 78.2
ClCG11G016540 Citrullus lanatus HOM05D003673 ORTHO05D004764 1.3e-196 689.9 458 76.6
Dinv07706 Davidia involucrata HOM05D003673 ORTHO05D004764 3.8e-196 688.3 459 76.7
Ciclev10031587m.g Citrus clementina HOM05D003673 ORTHO05D004764 1.4e-195 686.4 426 79.8
COL.COLO4_38400 Corchorus olitorius HOM05D003673 ORTHO05D004764 3.2e-195 685.3 432 78.7
Sc19g0001760 Simmondsia chinensis HOM05D003673 ORTHO05D004764 1.6e-194 682.9 436 76.8
Thecc.01G168600 Theobroma cacao HOM05D003673 ORTHO05D004764 1.0e-193 680.2 442 77.1
Sabra02G0046800 Salix brachista HOM05D003673 ORTHO05D004764 1.8e-193 679.5 448 77.7
Gohir.A07G080400 Gossypium hirsutum HOM05D003673 ORTHO05D004764 1.1e-192 676.8 435 76.8
Gorai.001G092000 Gossypium raimondii HOM05D003673 ORTHO05D004764 1.5e-192 676.4 439 75.9
ECA238G4715 Erigeron canadensis HOM05D003673 ORTHO05D004764 2.0e-192 676.0 437 75.3
Nn7g37943 Nelumbo nucifera HOM05D003673 ORTHO05D004764 2.0e-192 676.0 441 76.9
HanXRQChr14g0451901 Helianthus annuus HOM05D003673 ORTHO05D004764 2.6e-192 675.6 442 76.0
Gohir.D07G086000 Gossypium hirsutum HOM05D003673 ORTHO05D004764 4.4e-192 674.9 435 76.3
Cpa.g.sc50.111 Carica papaya HOM05D003673 ORTHO05D004764 5.7e-192 674.5 433 78.1
Cfa023358 Carpinus fangiana HOM05D003673 ORTHO05D004764 9.7e-192 673.7 455 75.8
MELO3C022961.2 Cucumis melo HOM05D003673 ORTHO05D004764 1.3e-191 673.3 441 76.2
Potri.002G057400 Populus trichocarpa HOM05D003673 ORTHO05D004764 1.7e-191 672.9 448 76.8
Prupe.3G177700 Prunus persica HOM05D003673 ORTHO05D004764 2.8e-191 672.2 450 75.3
PGR042G2748 Punica granatum HOM05D003673 ORTHO05D004764 2.8e-191 672.2 439 76.3
TAR626G0427 Trochodendron aralioides HOM05D003673 ORTHO05D004764 3.7e-191 671.8 430 77.9
CsaV3_4G032000 Cucumis sativus L. HOM05D003673 ORTHO05D004764 6.3e-191 671.0 457 74.2
Sed0005423 Sechium edule HOM05D003673 ORTHO05D004764 1.8e-190 669.5 436 77.1
FAN14G2563 Fragaria x ananassa HOM05D003673 ORTHO05D004764 3.1e-190 668.7 433 77.6
Hma1.2p1_0033F.1_g021200 Hydrangea macrophylla HOM05D003673 ORTHO05D004764 3.1e-190 668.7 435 76.8
QL08p044989 Quercus lobata HOM05D003673 ORTHO05D004764 3.1e-190 668.7 429 77.2
MD17G1134800 Malus domestica HOM05D003673 ORTHO05D004764 5.3e-190 667.9 450 74.9
FvH4_6g38670 Fragaria vesca HOM05D003673 ORTHO05D004764 7.0e-190 667.5 433 77.6
FAN05G2105 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.5e-189 666.4 447 76.1
Manes.02G088900 Manihot esculenta HOM05D003673 ORTHO05D004764 2.0e-189 666.0 446 74.2
TWI59G0698 Tripterygium wilfordii HOM05D003673 ORTHO05D004764 4.5e-189 664.8 431 77.3
Eucgr.A02022 Eucalyptus grandis HOM05D003673 ORTHO05D004764 5.9e-189 664.5 450 73.6
FAN02G0649 Fragaria x ananassa HOM05D003673 ORTHO05D004764 7.7e-189 664.1 433 77.1
TPR.G10168 Trifolium pratense HOM05D003673 ORTHO05D004764 2.2e-188 662.5 430 76.5
FAN09G3261 Fragaria x ananassa HOM05D003673 ORTHO05D004764 3.8e-188 661.8 433 76.9
Haze_13556 Corylus avellana HOM05D003673 ORTHO05D004764 5.0e-188 661.4 452 74.8
CiPaw.03G191900 Carya illinoinensis HOM05D003673 ORTHO05D004764 1.9e-187 659.4 436 75.0
DCAR_023045 Daucus carota HOM05D003673 ORTHO05D004764 3.2e-187 658.7 438 75.3
RcHm_v2.0_Chr2g0152131 Rosa chinensis HOM05D003673 ORTHO05D004764 7.2e-187 657.5 447 75.6
arahy.Tifrunner.gnm1.ann1.FDUH0H Arachis hypogaea HOM05D003673 ORTHO05D004764 6.1e-186 654.4 445 72.8
LjContig00049g0013493 Lotus japonicus HOM05D003673 ORTHO05D004764 1.0e-185 653.7 440 75.0
CANSAT64G2396 Cannabis sativa HOM05D003673 ORTHO05D004764 1.8e-185 652.9 425 76.9
arahy.Tifrunner.gnm1.ann1.I7WXBP Arachis hypogaea HOM05D003673 ORTHO05D004764 6.7e-185 651.0 445 72.4
Medtr5g091060 Medicago truncatula HOM05D003673 ORTHO05D004764 2.6e-184 649.0 426 76.1
SGA_v2.0_scaffold73G24479 Striga asiatica HOM05D003673 ORTHO05D004764 1.3e-183 646.7 427 74.7
Ca_06264_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 4.8e-183 644.8 428 75.2
Ca_30265_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 4.8e-183 644.8 428 75.2
Sp1g05330 Schrenkiella parvula HOM05D003673 ORTHO05D004764 6.3e-183 644.4 433 73.2
Carub.0001s0594 Capsella rubella HOM05D003673 ORTHO05D004764 8.2e-183 644.0 433 73.7
EL10Ac9g22832 Beta vulgaris HOM05D003673 ORTHO05D004764 1.4e-182 643.3 428 74.3
AL1G16600 Arabidopsis lyrata HOM05D003673 ORTHO05D004764 1.8e-182 642.9 422 74.6
MSTRG.14903 Avicennia marina HOM05D003673 ORTHO05D004764 4.1e-182 641.7 451 72.1
Hund22282 Selenicereus undatus HOM05D003673 ORTHO05D004764 5.3e-182 641.3 445 70.1
Ah.01g013590 Amaranthus hybridus HOM05D003673 ORTHO05D004764 1.6e-181 639.8 427 73.5
Aqoxy1G01891 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 2.6e-181 639.0 423 74.9
THA.LOC104815838 Tarenaya hassleriana HOM05D003673 ORTHO05D004764 2.6e-181 639.0 446 72.6
Glyma.14G030400 Glycine max HOM05D003673 ORTHO05D004764 4.5e-181 638.3 429 74.4
Aa31LG1G7910 Aethionema arabicum HOM05D003673 ORTHO05D004764 7.7e-181 637.5 422 74.9
Thhalv10007634m.g Eutrema salsugineum HOM05D003673 ORTHO05D004764 1.7e-180 636.3 438 72.6
Peaxi162Scf00416g00004 Petunia axillaris HOM05D003673 ORTHO05D004764 1.7e-180 636.3 444 71.6
Eucgr.A02024 Eucalyptus grandis HOM05D003673 ORTHO05D004764 6.5e-180 634.4 449 71.0
Lalb_Chr04g0248921 Lupinus albus HOM05D003673 ORTHO05D004764 6.5e-180 634.4 428 73.8
CANSAT64G0060 Cannabis sativa HOM05D003673 ORTHO05D004764 8.5e-180 634.0 418 75.1
Migut.M00071 Erythranthe guttata HOM05D003673 ORTHO05D004764 8.5e-180 634.0 429 72.5
BcaC07g42060 Brassica carinata HOM05D003673 ORTHO05D004764 1.5e-179 633.3 444 72.5
A09p66930 Brassica napus HOM05D003673 ORTHO05D004764 1.9e-179 632.9 423 74.9
C08p51160 Brassica napus HOM05D003673 ORTHO05D004764 2.5e-179 632.5 423 74.0
BolC8t52642H Brassica oleracea HOM05D003673 ORTHO05D004764 2.5e-179 632.5 423 74.0
BraA09t42028Z Brassica rapa HOM05D003673 ORTHO05D004764 3.2e-179 632.1 429 73.9
AUR62015128 Chenopodium quinoa HOM05D003673 ORTHO05D004764 3.2e-179 632.1 437 70.7
AUR62017589 Chenopodium quinoa HOM05D003673 ORTHO05D004764 3.2e-179 632.1 438 70.8
Aqoxy1G01890 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 1.2e-178 630.2 437 71.6
PGSC0003DMG400017707 Solanum tuberosum HOM05D003673 ORTHO05D004764 2.7e-178 629.0 448 72.1
Nitab4.5_0000006g0440 Nicotiana tabacum HOM05D003673 ORTHO05D004764 4.7e-178 628.2 431 72.9
Sopen05g024810 Solanum pennellii HOM05D003673 ORTHO05D004764 1.4e-177 626.7 446 71.3
Sopen07g023610 Solanum pennellii HOM05D003673 ORTHO05D004764 1.4e-177 626.7 424 74.8
Nitab4.5_0002201g0040 Nicotiana tabacum HOM05D003673 ORTHO05D004764 1.8e-177 626.3 431 72.9
Oeu051389.1 Olea europaea HOM05D003673 ORTHO05D004764 1.8e-177 626.3 446 70.6
Solyc07g045050.3 Solanum lycopersicum HOM05D003673 ORTHO05D004764 2.3e-177 625.9 424 75.0
Medtr5g090990 Medicago truncatula HOM05D003673 ORTHO05D004764 3.0e-177 625.5 433 72.3
Medtr1g022325 Medicago truncatula HOM05D003673 ORTHO05D004764 5.2e-177 624.8 435 73.1
BcaNung07075 Brassica carinata HOM05D003673 ORTHO05D004764 1.5e-176 623.2 422 73.2
BolC5t29254H Brassica oleracea HOM05D003673 ORTHO05D004764 2.0e-176 622.9 422 73.5
A10p05210 Brassica napus HOM05D003673 ORTHO05D004764 2.6e-176 622.5 422 73.0
C05p04810 Brassica napus HOM05D003673 ORTHO05D004764 2.6e-176 622.5 434 71.2
Psat2g017880 Pisum sativum HOM05D003673 ORTHO05D004764 2.6e-176 622.5 443 70.4
PGSC0003DMG400017420 Solanum tuberosum HOM05D003673 ORTHO05D004764 3.3e-176 622.1 423 74.0
Eucgr.A02023 Eucalyptus grandis HOM05D003673 ORTHO05D004764 4.4e-176 621.7 445 69.0
CAN.G7.15 Capsicum annuum HOM05D003673 ORTHO05D004764 1.3e-175 620.2 449 69.7
BraA10t42788Z Brassica rapa HOM05D003673 ORTHO05D004764 6.3e-175 617.8 432 71.3
VMungo0647G2026 Vigna mungo HOM05D003673 ORTHO05D004764 1.4e-174 616.7 438 72.4
MBI18_g13605_MAGBIO Magnolia biondii HOM05D003673 ORTHO05D004764 3.5e-173 612.1 452 69.7
PSO675G0095 Papaver somniferum HOM05D003673 ORTHO05D004764 1.3e-172 610.1 441 67.8
Phvul.008G194300 Phaseolus vulgaris HOM05D003673 ORTHO05D004764 1.3e-172 610.1 426 72.8
unitig_899.g15456 Utricularia gibba HOM05D003673 ORTHO05D004764 3.8e-172 608.6 418 73.9
CDE05G0951 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 2.7e-170 602.4 428 71.3
EL10Ac9g22831 Beta vulgaris HOM05D003673 ORTHO05D004764 4.8e-167 591.7 413 70.2
SalBow1G2057 Salvia bowleyana HOM05D003673 ORTHO05D004764 8.3e-167 590.9 440 69.3
COL.COLO4_38402 Corchorus olitorius HOM05D003673 ORTHO05D004764 2.7e-165 585.9 435 67.4
Dinv07089 Davidia involucrata HOM05D003673 ORTHO05D004764 8.6e-164 580.9 390 75.9
Lsat_1_v5_gn_6_42781 Lactuca sativa HOM05D003673 ORTHO05D004764 9.5e-163 577.4 427 67.4
PSO675G5654 Papaver somniferum HOM05D003673 ORTHO05D004764 9.5e-163 577.4 440 65.0
Actinidia24401 Actinidia chinensis HOM05D003673 ORTHO05D004764 1.6e-162 576.6 447 68.7
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 3.0e-161 572.4 398 72.1
Lsat_1_v5_gn_2_96721 Lactuca sativa HOM05D003673 ORTHO05D004764 6.8e-161 571.2 379 74.1
CANSAT64G0777 Cannabis sativa HOM05D003673 ORTHO05D004764 2.0e-160 569.7 424 67.5
BcaB02g06780 Brassica carinata HOM05D003673 ORTHO05D004764 4.4e-160 568.5 422 69.2
SEGI_30126 Sequoiadendron giganteum HOM05D003673 ORTHO05D004764 2.3e-153 546.2 443 63.7
Zm00001eb232960 Zea mays HOM05D003673 ORTHO05D004764 2.3e-153 546.2 432 64.8
CARHR006180 Cardamine hirsuta HOM05D003673 ORTHO05D004764 8.9e-153 544.3 369 72.9
AT1G06570 Arabidopsis thaliana HOM05D003673 ORTHO05D004764 2.2e-151 539.7 380 70.8
HanXRQChr02g0055101 Helianthus annuus HOM05D003673 ORTHO05D004764 2.2e-151 539.7 436 62.4
PSO144G0168 Papaver somniferum HOM05D003673 ORTHO05D004764 8.3e-151 537.7 422 63.7
CDE02G2922 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 1.4e-150 537.0 428 65.4
HPP92_002268 Vanilla planifolia HOM05D003673 ORTHO05D004764 7.0e-150 534.6 409 65.5
PSO170G5322 Papaver somniferum HOM05D003673 ORTHO05D004764 1.6e-149 533.5 429 63.2
PSO210G5105 Papaver somniferum HOM05D003673 ORTHO05D004764 3.0e-148 529.3 441 61.9
RcHm_v2.0_Chr2g0152141 Rosa chinensis HOM05D003673 ORTHO05D004764 1.1e-147 527.3 372 72.3
Pp3c1_27020 Physcomitrium patens HOM05D003673 ORTHO05D004764 5.6e-147 525.0 438 61.2
PSO210G6115 Papaver somniferum HOM05D003673 ORTHO05D004764 2.8e-146 522.7 435 61.1
Thecc.01G168800 Theobroma cacao HOM05D003673 ORTHO05D004764 4.7e-146 521.9 433 64.4
Pp3c2_15470 Physcomitrium patens HOM05D003673 ORTHO05D004764 1.4e-145 520.4 438 60.7
Mapoly0126s0038 Marchantia polymorpha HOM05D003673 ORTHO05D004764 2.6e-144 516.2 426 61.5
AagrBONN_evm.TU.Sc2ySwM_368.1457 Anthoceros agrestis HOM05D003673 ORTHO05D004764 5.8e-144 515.0 425 62.6
PSO210G1881 Papaver somniferum HOM05D003673 ORTHO05D004764 1.6e-141 506.9 438 59.6
Lj8C8T1 Lonicera japonica HOM05D003673 ORTHO05D004764 8.6e-140 501.1 334 76.3
SMO358G0369 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 1.5e-136 490.3 439 59.7
Cre09.g399030 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 1.4e-134 483.8 439 60.1
ECA233G6193 Erigeron canadensis HOM05D003673 ORTHO05D004764 2.4e-134 483.0 370 65.9
PRCOL_00001771 Prasinoderma coloniale HOM05D003673 ORTHO05D004764 1.2e-130 470.7 444 55.2
Cre09.g398993 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 2.4e-129 466.5 439 57.9
Potri.005G205200 Populus trichocarpa HOM05D003673 ORTHO05D004764 3.1e-129 466.1 443 59.8
CBR_g41741 Chara braunii HOM05D003673 ORTHO05D004764 1.6e-125 453.8 445 53.9
CBR_g46667 Chara braunii HOM05D003673 ORTHO05D004764 1.0e-124 451.1 443 54.2
CBR_g8495 Chara braunii HOM05D003673 ORTHO05D004764 1.1e-123 447.6 445 53.5
MCO11G070 Micromonas commoda HOM05D003673 ORTHO05D004764 2.8e-122 443.0 432 56.0
Glyma.02G284600 Glycine max HOM05D003673 ORTHO05D004764 1.8e-121 440.3 356 65.7
AagrBONN_evm.TU.Sc2ySwM_368.1545 Anthoceros agrestis HOM05D003673 ORTHO05D004764 4.0e-121 439.1 416 55.3
Zm00001eb304950 Zea mays HOM05D003673 ORTHO05D004764 5.3e-121 438.7 409 54.3
Solyc05g041200.4 Solanum lycopersicum HOM05D003673 ORTHO05D004764 1.1e-115 421.0 326 67.5
MD09G1148400 Malus domestica HOM05D003673 ORTHO05D004764 6.9e-113 411.8 387 60.7
Medtr5g090980 Medicago truncatula HOM05D003673 ORTHO05D004764 1.1e-110 404.4 378 58.2
SMO118G0557 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 1.0e-108 397.9 438 49.3
TPR.G25540 Trifolium pratense HOM05D003673 ORTHO05D004764 1.5e-107 394.0 433 49.7
Ah.02g114000 Amaranthus hybridus HOM05D003673 ORTHO05D004764 1.8e-105 387.1 377 53.6
ATR0763G164 Amborella trichopoda HOM05D003673 ORTHO05D004764 1.9e-102 377.1 273 67.0
Os02g0168100 Oryza sativa ssp. japonica HOM05D003673 ORTHO05D004764 1.5e-99 367.5 225 75.1
MD13G1156600 Malus domestica HOM05D003673 ORTHO05D004764 8.2e-98 361.7 387 51.7
arahy.Tifrunner.gnm1.ann1.KE2YGW Arachis hypogaea HOM05D003673 ORTHO05D004764 2.8e-90 336.7 382 52.6
Atru.chr6.2046 Acer truncatum HOM05D003673 ORTHO05D004764 8.8e-84 315.1 173 85.0
AUR62016194 Chenopodium quinoa HOM05D003673 ORTHO05D004764 9.7e-83 311.6 299 54.8
Thecc.01G169100 Theobroma cacao HOM05D003673 ORTHO05D004764 1.7e-79 300.8 250 65.6
arahy.Tifrunner.gnm1.ann1.3I6JIA Arachis hypogaea HOM05D003673 ORTHO05D004764 2.0e-75 287.3 243 62.6
AUR62039301 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.3e-63 248.1 203 58.1
AUR62044533 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.3e-63 248.1 203 58.1
AUR62035118 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.2e-62 243.0 196 59.2
AUR62039293 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.2e-62 243.0 196 59.2
AUR62039297 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.2e-62 243.0 196 59.2
Cc05_g01440 Coffea canephora HOM05D003673 ORTHO05D004764 6.1e-53 212.6 114 87.7
AUR62035117 Chenopodium quinoa HOM05D003673 ORTHO05D017143 8.8e-52 208.8 217 53.5
AUR62039294 Chenopodium quinoa HOM05D003673 ORTHO05D017143 8.8e-52 208.8 217 53.5
AUR62039298 Chenopodium quinoa HOM05D003673 ORTHO05D017143 8.8e-52 208.8 217 53.5
GSVIVG01020837001 Vitis vinifera HOM05D003673 ORTHO05D004764 9.8e-51 205.3 113 84.1
Cfa023357 Carpinus fangiana HOM05D003673 ORTHO05D017143 9.5e-38 162.2 103 76.7
FvH4_5g31130 Fragaria vesca HOM05D003673 ORTHO05D004764 1.2e-37 161.8 89 84.3
FAN18G0200 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.4e-36 158.3 89 82.0
Dinv42661 Davidia involucrata HOM05D002888 ORTHO05D003321 5.2e-36 156.4 139 58.3
Atru.chr6.2045 Acer truncatum HOM05D003673 ORTHO05D017143 1.5e-35 154.8 113 67.3
AUR62044532 Chenopodium quinoa HOM05D003673 ORTHO05D017143 1.6e-32 144.8 133 57.9
Haze_25279 Corylus avellana HOM05D003673 ORTHO05D004764 2.7e-32 144.1 162 51.2
MD05G1024200 Malus domestica HOM05D003673 ORTHO05D004764 3.1e-28 130.6 76 76.3
COL.COLO4_38401 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.1e-25 122.1 148 48.6
COL.COLO4_20758 Corchorus olitorius HOM05D003673 ORTHO05D004764 8.6e-23 112.5 70 75.7
ATR0763G191 Amborella trichopoda HOM05D003673 ORTHO05D017143 1.5e-22 111.7 115 52.2
Dinv21956 Davidia involucrata HOM05D003673 ORTHO05D004764 2.5e-22 110.9 99 60.6
TPR.G10161 Trifolium pratense HOM05D003673 ORTHO05D004764 2.5e-22 110.9 57 87.7
GSVIVG01013079001 Vitis vinifera HOM05D003673 ORTHO05D004764 3.3e-22 110.5 64 76.6
CARHR006190 Cardamine hirsuta HOM05D003673 ORTHO05D004764 7.3e-22 109.4 56 87.5
AUR62039302 Chenopodium quinoa HOM05D003673 ORTHO05D017143 3.4e-19 100.5 139 47.5
Lj8C8T3 Lonicera japonica HOM05D003673 ORTHO05D004764 2.5e-14 84.3 43 90.7
COL.COLO4_19675 Corchorus olitorius HOM05D003673 ORTHO05D163473 4.3e-14 83.6 351 27.6
MD05G1024100 Malus domestica HOM05D003673 ORTHO05D017143 2.0e-11 74.7 53 64.2
FAN21G3810 Fragaria x ananassa HOM05D003673 ORTHO05D025527 3.8e-10 70.5 138 37.7
FAN18G2996 Fragaria x ananassa HOM05D003673 ORTHO05D025527 6.4e-10 69.7 171 33.9
FAN25G1183 Fragaria x ananassa HOM05D003673 ORTHO05D025527 3.2e-09 67.4 159 34.0


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