Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0060800 Rhododendron simsii HOM05D000916 ORTHO05D009274 9.0e-116 420.2 208 100.0
vmacro13705 Vaccinium macrocarpon HOM05D000916 ORTHO05D009274 5.0e-66 255.0 229 65.5
Rhsim07G0060200 Rhododendron simsii HOM05D000916 ORTHO05D009274 6.3e-61 238.0 206 66.0
Dinv07424 Davidia involucrata HOM05D000916 ORTHO05D009274 6.4e-53 211.5 205 62.9
COL.COLO4_12325 Corchorus olitorius HOM05D000916 ORTHO05D003833 1.9e-49 199.9 180 60.0
Lj9P642T24 Lonicera japonica HOM05D000916 ORTHO05D009274 1.6e-48 196.8 143 67.8
Oeu049471.1 Olea europaea HOM05D000916 ORTHO05D009274 3.6e-48 195.7 201 54.7
Nn2g15166 Nelumbo nucifera HOM05D000916 ORTHO05D009274 6.2e-48 194.9 206 55.3
Cc04_g14680 Coffea canephora HOM05D000916 ORTHO05D009274 8.0e-48 194.5 222 52.3
Actinidia06285 Actinidia chinensis HOM05D000916 ORTHO05D009274 1.4e-47 193.7 201 57.7
TAR636G3509 Trochodendron aralioides HOM05D000916 ORTHO05D009274 4.0e-47 192.2 202 55.4
GSVIVG01001443001 Vitis vinifera HOM05D000916 ORTHO05D009274 4.0e-47 192.2 141 69.5
CSS0046245 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D009274 1.5e-46 190.3 144 69.4
TAR636G0367 Trochodendron aralioides HOM05D000916 ORTHO05D009274 3.4e-46 189.1 168 60.7
AUR62023107 Chenopodium quinoa HOM05D000916 ORTHO05D009274 1.7e-45 186.8 207 51.2
Atru.chr11.2553 Acer truncatum HOM05D000916 ORTHO05D009274 3.7e-45 185.7 216 53.2
RcHm_v2.0_Chr1g0318771 Rosa chinensis HOM05D000916 ORTHO05D009274 3.7e-45 185.7 216 52.3
CiPaw.14G004300 Carya illinoinensis HOM05D000916 ORTHO05D009274 1.1e-44 184.1 155 61.3
Glyma.09G226100 Glycine max HOM05D000916 ORTHO05D009274 1.4e-44 183.7 141 63.8
Manes.07G012200 Manihot esculenta HOM05D000916 ORTHO05D009274 1.9e-44 183.3 204 54.9
PSO170G4961 Papaver somniferum HOM05D000916 ORTHO05D009274 1.9e-44 183.3 153 62.1
Migut.N01806 Erythranthe guttata HOM05D000916 ORTHO05D009274 4.1e-44 182.2 207 49.8
PGR031G2328 Punica granatum HOM05D000916 ORTHO05D009274 1.2e-43 180.6 208 52.9
Lj3g0014758 Lotus japonicus HOM05D000916 ORTHO05D009274 2.1e-43 179.9 160 58.1
Potri.001G260600 Populus trichocarpa HOM05D000916 ORTHO05D009274 2.7e-43 179.5 143 65.0
Aqoxy2G00212 Aquilegia oxysepala HOM05D000916 ORTHO05D009274 3.5e-43 179.1 206 50.5
Potri.001G259216 Populus trichocarpa HOM05D000916 ORTHO05D009274 3.5e-43 179.1 152 62.5
Potri.001G259900 Populus trichocarpa HOM05D000916 ORTHO05D009274 3.5e-43 179.1 152 62.5
arahy.Tifrunner.gnm1.ann1.W0KZJE Arachis hypogaea HOM05D000916 ORTHO05D009274 1.3e-42 177.2 201 50.7
Eucgr.G03277 Eucalyptus grandis HOM05D000916 ORTHO05D009274 1.7e-42 176.8 146 61.0
Lsat_1_v5_gn_7_34400 Lactuca sativa HOM05D000916 ORTHO05D009274 3.0e-42 176.0 207 52.7
Peaxi162Scf01108g00212 Petunia axillaris HOM05D000916 ORTHO05D009274 3.0e-42 176.0 228 49.6
FAN03G1280 Fragaria x ananassa HOM05D000916 ORTHO05D009274 3.9e-42 175.6 206 52.9
Nitab4.5_0002888g0050 Nicotiana tabacum HOM05D000916 ORTHO05D009274 3.9e-42 175.6 170 57.1
FvH4_7g01930 Fragaria vesca HOM05D000916 ORTHO05D009274 5.1e-42 175.3 206 52.4
FAN06G1234 Fragaria x ananassa HOM05D000916 ORTHO05D009274 5.1e-42 175.3 206 52.4
PSO210G2598 Papaver somniferum HOM05D000916 ORTHO05D009274 8.6e-42 174.5 154 57.1
Psat0s488g0040 Pisum sativum HOM05D000916 ORTHO05D009274 1.5e-41 173.7 169 56.8
Gorai.004G067400 Gossypium raimondii HOM05D000916 ORTHO05D009274 2.5e-41 172.9 201 52.7
Prupe.2G025000 Prunus persica HOM05D000916 ORTHO05D009274 2.5e-41 172.9 201 51.7
Solyc01g088030.4 Solanum lycopersicum HOM05D000916 ORTHO05D009274 7.3e-41 171.4 211 50.7
Gohir.D08G065100 Gossypium hirsutum HOM05D000916 ORTHO05D009274 2.1e-40 169.9 201 51.2
Ciclev10032919m.g Citrus clementina HOM05D000916 ORTHO05D009274 2.8e-40 169.5 141 61.0
PGSC0003DMG400006832 Solanum tuberosum HOM05D000916 ORTHO05D009274 2.8e-40 169.5 175 54.9
TWI53G0499 Tripterygium wilfordii HOM05D000916 ORTHO05D009274 2.8e-40 169.5 208 51.0
CAN.G410.4 Capsicum annuum HOM05D000916 ORTHO05D009274 3.6e-40 169.1 225 48.4
Medtr0003s0480 Medicago truncatula HOM05D000916 ORTHO05D009274 3.6e-40 169.1 185 54.6
Sopen01g034920 Solanum pennellii HOM05D000916 ORTHO05D009274 4.7e-40 168.7 213 49.8
HanXRQChr15g0480451 Helianthus annuus HOM05D000916 ORTHO05D009274 6.2e-40 168.3 200 52.5
DCAR_022368 Daucus carota HOM05D000916 ORTHO05D009274 2.3e-39 166.4 199 49.2
Phvul.011G013300 Phaseolus vulgaris HOM05D000916 ORTHO05D009274 3.1e-39 166.0 181 52.5
VMungo1127G0561 Vigna mungo HOM05D000916 ORTHO05D009274 8.9e-39 164.5 181 51.4
MSTRG.5047 Avicennia marina HOM05D000916 ORTHO05D009274 1.3e-37 160.6 202 49.0
EL10Ac2g04385 Beta vulgaris HOM05D000916 ORTHO05D009274 1.3e-37 160.6 203 47.8
Cpa.g.sc197.27 Carica papaya HOM05D000916 ORTHO05D009274 2.2e-37 159.8 178 52.2
Carub.0008s0547 Capsella rubella HOM05D000916 ORTHO05D009274 2.9e-37 159.5 208 47.6
MELO3C024009.2 Cucumis melo HOM05D000916 ORTHO05D009274 4.9e-37 158.7 186 48.4
FAN03G2260 Fragaria x ananassa HOM05D000916 ORTHO05D009274 4.9e-37 158.7 198 51.5
AT5G43210 Arabidopsis thaliana HOM05D000916 ORTHO05D009274 8.3e-37 157.9 204 47.5
Sc11g0009010 Simmondsia chinensis HOM05D000916 ORTHO05D009274 1.9e-36 156.8 206 48.5
Sp2g08020 Schrenkiella parvula HOM05D000916 ORTHO05D009274 2.4e-36 156.4 202 48.5
THA.LOC104826696 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 2.4e-36 156.4 204 48.5
THA.LOC104826705 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 2.4e-36 156.4 204 48.5
MBI11_g21817_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D009274 3.2e-36 156.0 148 56.1
CANSAT80G0736 Cannabis sativa HOM05D000916 ORTHO05D009274 2.7e-35 152.9 151 57.6
Sed0025824 Sechium edule HOM05D000916 ORTHO05D009274 2.7e-35 152.9 180 47.2
BcaB07g30592 Brassica carinata HOM05D000916 ORTHO05D009274 3.5e-35 152.5 200 47.5
A02p27690 Brassica napus HOM05D000916 ORTHO05D009274 7.8e-35 151.4 200 45.5
BraA02t07808Z Brassica rapa HOM05D000916 ORTHO05D009274 7.8e-35 151.4 200 45.5
Aa31LG9G13290 Aethionema arabicum HOM05D000916 ORTHO05D009274 1.0e-34 151.0 206 47.1
Thhalv10003279m.g Eutrema salsugineum HOM05D000916 ORTHO05D009274 1.0e-34 151.0 200 47.5
SGA_v2.0_scaffold5G02941 Striga asiatica HOM05D000916 ORTHO05D009274 1.0e-34 151.0 227 44.5
AUR62009428 Chenopodium quinoa HOM05D000916 ORTHO05D009274 3.9e-34 149.1 100 67.0
CsaV3_3G031830 Cucumis sativus L. HOM05D000916 ORTHO05D009274 3.9e-34 149.1 204 43.6
Duzib133G0774 Durio zibethinus HOM05D000916 ORTHO05D009274 3.9e-34 149.1 97 70.1
THA.LOC104827433 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 5.1e-34 148.7 196 48.5
Hma1.2p1_0579F.1_g182540 Hydrangea macrophylla HOM05D000916 ORTHO05D009274 6.6e-34 148.3 108 68.5
ATR0782G182 Amborella trichopoda HOM05D000916 ORTHO05D009274 9.5e-33 144.4 200 43.0
ClCG10G012070 Citrullus lanatus HOM05D000916 ORTHO05D009274 1.2e-32 144.1 192 44.3
CDE11G0804 Ceratophyllum demersum HOM05D000916 ORTHO05D009274 1.6e-32 143.7 137 55.5
TAR636G0653 Trochodendron aralioides HOM05D000916 ORTHO05D009274 1.6e-32 143.7 166 53.0
Potri.001G260300 Populus trichocarpa HOM05D000916 ORTHO05D009274 2.1e-32 143.3 120 63.3
Gohir.A08G055800 Gossypium hirsutum HOM05D000916 ORTHO05D009274 1.5e-30 137.1 102 62.7
Sabra16G0159300 Salix brachista HOM05D000916 ORTHO05D009274 2.0e-30 136.7 100 65.0
MD02G1299300 Malus domestica HOM05D000916 ORTHO05D009274 4.4e-30 135.6 98 63.3
Zm00001eb405020 Zea mays HOM05D000916 ORTHO05D009274 8.4e-29 131.3 139 51.1
Os11g0146550 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 1.4e-28 130.6 150 48.7
Ah.16g100710 Amaranthus hybridus HOM05D000916 ORTHO05D009274 1.9e-28 130.2 98 63.3
Lalb_Chr03g0024151 Lupinus albus HOM05D000916 ORTHO05D009274 3.2e-28 129.4 104 60.6
RcHm_v2.0_Chr1g0318641 Rosa chinensis HOM05D000916 ORTHO05D009274 5.8e-22 108.6 153 47.7
SEGI_20425 Sequoiadendron giganteum HOM05D000916 ORTHO05D009274 5.8e-22 108.6 107 56.1
Cfa010832 Carpinus fangiana HOM05D000916 ORTHO05D009274 1.9e-20 103.6 139 51.1
FAN01G3008 Fragaria x ananassa HOM05D000916 ORTHO05D009274 5.1e-18 95.5 143 47.6
AL8G17370 Arabidopsis lyrata HOM05D000916 ORTHO05D009274 3.6e-16 89.4 143 46.2
Mapoly0059s0058 Marchantia polymorpha HOM05D000916 ORTHO05D009274 1.8e-15 87.0 149 36.9
Haze_03122 Corylus avellana HOM05D000916 ORTHO05D009274 1.2e-14 84.3 125 48.0
RcHm_v2.0_Chr1g0318631 Rosa chinensis HOM05D000916 ORTHO05D009274 1.5e-14 84.0 62 64.5
Nitab4.5_0006695g0040 Nicotiana tabacum HOM05D000916 ORTHO05D009274 2.0e-14 83.6 178 37.6
AagrBONN_evm.TU.Sc2ySwM_117.2289 Anthoceros agrestis HOM05D000916 ORTHO05D009274 2.7e-11 73.2 125 37.6
Atru.chr11.2549 Acer truncatum HOM05D000916 ORTHO05D009274 4.6e-11 72.4 67 55.2
Os12g0143300 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 1.3e-10 70.9 117 42.7
AagrBONN_evm.TU.Sc2ySwM_117.2287 Anthoceros agrestis HOM05D000916 ORTHO05D009274 1.8e-07 60.5 139 31.7


User provided reference genes

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