Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 3.6e-54 214.5 101 100.0
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 3.0e-48 194.9 101 90.1
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 1.5e-47 192.6 101 91.1
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 4.3e-47 191.0 101 90.1
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 5.6e-47 190.7 101 91.1
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 5.6e-47 190.7 101 91.1
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 5.6e-47 190.7 101 92.1
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 9.6e-47 189.9 101 88.1
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 1.3e-46 189.5 101 90.1
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 1.3e-46 189.5 101 90.1
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 1.6e-46 189.1 101 89.1
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 2.1e-46 188.7 101 88.1
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 2.1e-46 188.7 101 88.1
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 2.1e-46 188.7 101 90.1
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 2.8e-46 188.3 101 88.1
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 2.8e-46 188.3 102 88.2
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 3.7e-46 188.0 101 89.1
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 3.7e-46 188.0 101 90.1
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 3.7e-46 188.0 101 90.1
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 4.8e-46 187.6 100 88.0
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 4.8e-46 187.6 101 89.1
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 6.2e-46 187.2 101 89.1
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 6.2e-46 187.2 101 89.1
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 6.2e-46 187.2 101 88.1
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 6.2e-46 187.2 101 88.1
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 6.2e-46 187.2 101 89.1
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 6.2e-46 187.2 101 89.1
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 6.2e-46 187.2 101 88.1
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 8.1e-46 186.8 101 88.1
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 8.1e-46 186.8 101 88.1
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 8.1e-46 186.8 101 88.1
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 1.1e-45 186.4 101 88.1
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 1.1e-45 186.4 101 88.1
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 1.1e-45 186.4 102 88.2
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 1.1e-45 186.4 101 88.1
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 1.4e-45 186.0 101 88.1
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 1.4e-45 186.0 101 88.1
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 1.4e-45 186.0 101 88.1
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 1.4e-45 186.0 101 86.1
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.8e-45 185.7 101 88.1
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 2.4e-45 185.3 101 86.1
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 2.4e-45 185.3 101 88.1
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 2.4e-45 185.3 101 87.1
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 5.3e-45 184.1 101 87.1
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 5.3e-45 184.1 101 87.1
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 87.1
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 84.2
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 6.9e-45 183.7 102 86.3
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 87.1
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 86.1
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 86.1
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 87.1
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 86.1
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 87.1
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 6.9e-45 183.7 101 87.1
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 9.0e-45 183.3 101 84.2
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 9.0e-45 183.3 101 86.1
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 9.0e-45 183.3 101 87.1
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 9.0e-45 183.3 101 88.1
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 9.0e-45 183.3 101 86.1
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 1.2e-44 183.0 102 85.3
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 1.5e-44 182.6 101 86.1
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 1.5e-44 182.6 101 85.1
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 1.5e-44 182.6 101 86.1
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 2.0e-44 182.2 101 88.1
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 2.6e-44 181.8 101 87.1
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 3.4e-44 181.4 101 85.1
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 4.5e-44 181.0 101 84.2
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 4.5e-44 181.0 101 84.2
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 5.8e-44 180.6 100 85.0
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 7.6e-44 180.3 101 84.2
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 1.0e-43 179.9 101 83.2
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 1.0e-43 179.9 99 86.9
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 1.3e-43 179.5 101 86.1
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 1.7e-43 179.1 101 86.1
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 2.2e-43 178.7 101 84.2
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 2.2e-43 178.7 101 82.2
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 2.2e-43 178.7 101 82.2
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 2.2e-43 178.7 101 82.2
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 2.2e-43 178.7 101 82.2
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 2.2e-43 178.7 101 85.1
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 2.9e-43 178.3 113 77.9
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 2.9e-43 178.3 102 82.4
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 3.8e-43 177.9 101 82.2
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 3.8e-43 177.9 101 83.2
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 8.4e-43 176.8 99 83.8
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 1.1e-42 176.4 101 84.2
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 1.4e-42 176.0 106 82.1
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 1.9e-42 175.6 101 81.2
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 2.5e-42 175.3 101 84.2
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 3.2e-42 174.9 101 82.2
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 6.0e-41 170.6 127 69.3
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 7.9e-41 170.2 92 87.0
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 2.3e-40 168.7 92 87.0
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 3.0e-40 168.3 101 74.3
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 3.0e-40 168.3 99 83.8
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 5.1e-40 167.5 93 86.0
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 3.7e-38 161.4 92 83.7
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 2.0e-36 155.6 101 73.3
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 2.6e-36 155.2 101 70.3
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 2.2e-35 152.1 88 81.8
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 1.2e-33 146.4 101 65.3
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 4.6e-33 144.4 94 72.3
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 6.1e-33 144.1 99 67.7
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 1.3e-32 142.9 101 68.3
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 7.4e-31 137.1 94 74.5
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.3e-30 136.3 70 90.0
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 4.1e-29 131.3 101 56.4
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 5.3e-29 131.0 65 92.3
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 6.9e-29 130.6 66 92.4
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.2e-28 129.8 65 90.8
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 1.2e-28 129.8 65 92.3
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 1.7e-27 125.9 73 83.6
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 5.5e-26 120.9 93 61.3
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 7.2e-26 120.6 105 57.1
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.8e-24 115.9 74 77.0
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 5.3e-21 104.4 62 80.6
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 6.9e-21 104.0 101 46.5
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 3.8e-19 98.2 54 87.0
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 1.4e-16 89.7 62 67.7
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 1.9e-10 69.3 44 75.0
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 5.2e-08 61.2 45 62.2
SHI13486 Sapria himalayana HOM05D006419 ORTHO05D008096 2.6e-07 58.9 41 65.9


User provided reference genes

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