Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0069200 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.4e-71 271.2 134 100.0
Rhsim01G0051500 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.8e-24 114.4 90 62.2
Rhsim13G0093200 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.2e-22 109.4 150 42.0
Rhsim06G0000800 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-17 93.2 93 50.5
Rhsim11G0093400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-17 93.2 93 50.5
Actinidia03923 Actinidia chinensis HOM05D000004 ORTHO05D000002 2.3e-16 89.4 104 46.2
CSS0032753 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-15 86.7 93 48.4
Rhsim01G0083200 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.5e-15 86.7 119 46.2
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-15 85.9 92 50.0
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-14 80.9 90 47.8
CSS0019420 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-13 80.1 96 44.8
Ah.08g220400 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.0e-11 73.9 91 40.7
Ah.06g187770 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.1e-11 71.6 91 41.8
VMungo1383G1114 Vigna mungo HOM05D003555 ORTHO05D004542 4.3e-10 68.6 101 36.6
Rhsim12G0205800 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.6e-10 68.2 91 39.6
Rhsim13G0092800 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.6e-10 68.2 91 39.6
Rhsim01G0082200 Rhododendron simsii HOM05D000004 ORTHO05D000002 7.3e-10 67.8 104 42.3
CSS0010655 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-09 66.6 74 44.6
ECA247G0045 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-09 66.2 103 38.8
Hma1.2p1_1778F.1_g302030 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.1e-09 66.2 78 42.3
Rhsim09G0107500 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.8e-09 65.9 93 38.7
Rhsim11G0145700 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.7e-09 65.1 82 41.5
Rhsim04G0144600 Rhododendron simsii HOM05D000004 ORTHO05D000002 8.1e-09 64.3 93 43.0
CSS0034428 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-08 63.5 119 32.8
Rhsim02G0149500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.8e-08 63.2 86 41.9
ECA246G1059 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-08 62.8 97 35.1
CAN.G430.5 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-08 62.0 67 43.3
Nn2g15711 Nelumbo nucifera HOM05D000004 ORTHO05D000002 4.0e-08 62.0 102 35.3
Ah.01g014560 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.2e-08 61.6 66 42.4
Hma1.2p1_0044F.1_g026130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.2e-08 61.6 72 40.3
Hma1.2p1_0135F.1_g061740 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.2e-08 61.6 94 36.2
Hma1.2p1_0135F.1_g061755 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.2e-08 61.6 94 36.2
PSO063G2638 Papaver somniferum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 96 36.5
Rhsim13G0234900 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.2e-08 61.6 118 32.2
AUR62003850 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.8e-08 61.2 88 40.9
Rhsim09G0045700 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.8e-08 61.2 91 38.5
CAN.G351.14 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-07 60.5 127 27.6
ECA232G0275 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 60.5 90 38.9
PSO384G1149 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-07 60.5 93 37.6
PSO782G0737 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-07 60.5 90 37.8
COL.COLO4_33791 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.5e-07 60.1 91 41.8
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.5e-07 60.1 65 44.6
RhsimUnG0001700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.5e-07 60.1 98 37.8
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 2.6e-07 59.3 91 31.9
ECA232G3234 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-07 59.3 100 36.0
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.6e-07 59.3 89 39.3
Lju41C47T6 Lonicera japonica HOM05D000004 ORTHO05D000002 2.6e-07 59.3 101 35.6
PSO782G2503 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-07 59.3 91 35.2
Ah.16g105440 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.4e-07 58.9 71 40.8
Hma1.2p1_0253F.1_g103090 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.4e-07 58.9 96 38.5
Atru.chr10.469 Acer truncatum HOM05D000004 ORTHO05D000002 4.4e-07 58.5 66 42.4
CiPaw.07G069300 Carya illinoinensis HOM05D000004 ORTHO05D000002 4.4e-07 58.5 96 37.5
PSO675G9287 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-07 58.5 90 38.9
AUR62040097 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.8e-07 58.2 95 37.9
Hma1.2p1_0487F.1_g163610 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.8e-07 58.2 88 37.5
Lj9P307T30 Lonicera japonica HOM05D000004 ORTHO05D000002 7.6e-07 57.8 79 36.7
Nn2g14341 Nelumbo nucifera HOM05D000004 ORTHO05D000002 7.6e-07 57.8 97 33.0
TPR.G22228 Trifolium pratense HOM05D000004 ORTHO05D000002 7.6e-07 57.8 92 33.7
CAN.G674.43 Capsicum annuum HOM05D000004 ORTHO05D000002 9.9e-07 57.4 98 34.7
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 9.9e-07 57.4 101 32.7
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.9e-07 57.4 66 40.9
PSO700G0335 Papaver somniferum HOM05D000004 ORTHO05D000002 9.9e-07 57.4 92 38.0
SHI01384 Sapria himalayana HOM05D000004 ORTHO05D000002 9.9e-07 57.4 93 37.6
Sp3g29695 Schrenkiella parvula HOM05D000004 ORTHO05D000002 9.9e-07 57.4 104 35.6
Ah.07g201970 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.3e-06 57.0 66 37.9
CAN.G174.4 Capsicum annuum HOM05D000004 ORTHO05D000002 1.3e-06 57.0 89 33.7
AUR62018652 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.3e-06 57.0 63 42.9
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 57.0 63 42.9
PSO063G2072 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 57.0 98 40.8
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 57.0 88 39.8
PSO675G4898 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 57.0 95 35.8
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 1.3e-06 57.0 104 34.6
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-06 57.0 104 34.6
PSO210G3880 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-06 56.6 72 40.3
Rhsim01G0093400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.7e-06 56.6 95 33.7
AUR62026446 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.2e-06 56.2 64 45.3
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.2e-06 56.2 98 34.7
PSO170G6409 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-06 56.2 115 35.7
Rhsim04G0143300 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.2e-06 56.2 87 35.6
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.9e-06 55.8 93 32.3
COL.COLO4_29679 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.9e-06 55.8 71 35.2
Hma1.2p1_0849F.1_g227950 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.9e-06 55.8 101 35.6
Psat6g169480 Pisum sativum HOM05D028757 ORTHO05D000002 2.9e-06 55.8 69 42.0
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 2.9e-06 55.8 96 32.3
AUR62007521 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.8e-06 55.5 70 42.9
AUR62007645 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.8e-06 55.5 70 42.9
Lj5C185T14 Lonicera japonica HOM05D000004 ORTHO05D000002 3.8e-06 55.5 115 30.4
PSO170G4176 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-06 55.5 87 33.3
PSO675G5638 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-06 55.5 97 36.1
Psat1g135400 Pisum sativum HOM05D000004 ORTHO05D000002 3.8e-06 55.5 69 42.0
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-06 55.1 88 36.4
COL.COLO4_17210 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.9e-06 55.1 77 40.3
PSO832G0754 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-06 55.1 76 42.1
AUR62002516 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.4e-06 54.7 90 34.4
COL.COLO4_10638 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.4e-06 54.7 68 38.2
COL.COLO4_35559 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.4e-06 54.7 94 31.9
Lj3C465G7 Lonicera japonica HOM05D000004 ORTHO05D000002 6.4e-06 54.7 66 39.4
Lj4C831G13 Lonicera japonica HOM05D000004 ORTHO05D000002 6.4e-06 54.7 66 39.4
Lju470C18G3 Lonicera japonica HOM05D000004 ORTHO05D000002 6.4e-06 54.7 105 32.4
Ah.07g201610 Amaranthus hybridus HOM05D000004 ORTHO05D000002 8.4e-06 54.3 51 49.0
CAN.G1058.16 Capsicum annuum HOM05D000004 ORTHO05D000002 8.4e-06 54.3 92 37.0
COL.COLO4_09190 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.4e-06 54.3 65 40.0
ECA233G2312 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.4e-06 54.3 105 33.3
ECA233G3083 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.4e-06 54.3 97 29.9
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.4e-06 54.3 97 30.9
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 8.4e-06 54.3 91 36.3
PSO675G0192 Papaver somniferum HOM05D000004 ORTHO05D000002 8.4e-06 54.3 78 35.9
Psat7g011880 Pisum sativum HOM05D000004 ORTHO05D000002 8.4e-06 54.3 69 40.6


User provided reference genes

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