Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 8.1e-182 640.2 304 100.0
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 3.8e-139 498.4 317 75.4
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 4.2e-138 495.0 300 76.3
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 7.2e-138 494.2 300 75.7
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 6.1e-137 491.1 300 75.0
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 6.1e-137 491.1 300 74.7
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.8e-136 489.6 301 75.4
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 5.1e-136 488.0 300 74.3
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 3.3e-135 485.3 300 73.0
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 5.7e-135 484.6 300 75.3
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 7.4e-135 484.2 300 74.0
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 7.4e-135 484.2 300 73.7
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.4e-133 479.9 300 73.0
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 3.1e-133 478.8 300 74.3
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 3.1e-133 478.8 304 72.4
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 5.3e-133 478.0 301 73.4
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 7.0e-133 477.6 294 74.5
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 9.1e-133 477.2 300 72.7
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 3.5e-132 475.3 300 72.0
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 3.5e-132 475.3 293 74.7
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 7.7e-132 474.2 300 72.7
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 7.7e-132 474.2 329 68.1
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 1.0e-131 473.8 300 71.7
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 2.2e-131 472.6 300 71.7
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 2.2e-131 472.6 301 72.8
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 3.8e-131 471.9 300 74.0
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 3.8e-131 471.9 300 72.0
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 5.0e-131 471.5 300 71.7
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 1.1e-130 470.3 301 72.4
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.1e-130 470.3 300 74.3
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.5e-130 469.9 297 72.1
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 1.9e-130 469.5 300 71.3
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 2.5e-130 469.2 300 71.3
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 2.5e-130 469.2 300 70.7
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 3.2e-130 468.8 300 71.7
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 4.2e-130 468.4 294 73.1
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 4.2e-130 468.4 300 71.7
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 5.5e-130 468.0 300 71.0
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 9.4e-130 467.2 292 72.9
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 1.6e-129 466.5 300 70.3
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 1.6e-129 466.5 300 70.7
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 2.1e-129 466.1 299 70.2
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 3.6e-129 465.3 301 70.8
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.8e-128 463.0 300 71.0
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 1.8e-128 463.0 312 67.9
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 2.3e-128 462.6 310 70.3
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 3.0e-128 462.2 300 70.7
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 3.9e-128 461.8 295 72.2
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 5.2e-128 461.5 301 69.8
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 1.5e-127 459.9 293 72.0
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 2.6e-127 459.1 301 71.8
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 4.8e-126 454.9 296 68.9
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 2.4e-125 452.6 300 69.7
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 4.1e-125 451.8 301 69.4
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 5.3e-125 451.4 296 68.2
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 7.0e-125 451.1 300 69.7
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 1.2e-124 450.3 299 67.2
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.6e-124 449.9 300 69.7
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 7.7e-124 447.6 300 69.0
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 3.8e-123 445.3 297 69.0
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 3.8e-123 445.3 297 69.0
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 3.8e-123 445.3 297 69.0
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 5.0e-123 444.9 296 69.3
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 6.5e-123 444.5 299 68.9
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 8.5e-123 444.1 297 68.7
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 8.5e-123 444.1 297 66.0
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 3.2e-122 442.2 305 68.5
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 5.5e-122 441.4 297 68.7
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 5.5e-122 441.4 300 68.0
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 5.5e-122 441.4 300 67.7
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 1.6e-121 439.9 298 67.4
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 2.7e-121 439.1 298 67.1
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 3.6e-121 438.7 299 66.6
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 1.0e-120 437.2 300 67.7
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 1.4e-120 436.8 298 68.5
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 1.8e-120 436.4 301 67.8
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 4.4e-119 431.8 297 67.7
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 5.7e-119 431.4 300 69.7
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 3.1e-117 425.6 301 67.8
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.6e-116 423.3 302 64.9
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 1.6e-116 423.3 302 66.6
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 2.7e-116 422.5 300 68.0
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 7.7e-116 421.0 300 64.3
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.9e-115 419.1 335 64.8
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.4e-112 410.2 297 62.3
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 1.8e-112 409.8 255 73.3
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 2.0e-111 406.4 257 73.5
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 5.7e-111 404.8 296 61.8
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 3.3e-106 389.0 300 56.7
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 8.0e-105 384.4 296 57.8
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.4e-101 372.9 230 75.7
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 5.4e-101 371.7 299 53.8
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 7.8e-100 367.9 299 59.9
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.3e-99 367.1 314 58.6
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 2.0e-95 353.2 236 69.1
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 3.4e-87 325.9 299 54.8
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 3.0e-83 312.8 300 53.3
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 6.2e-81 305.1 303 52.1
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 1.9e-77 293.5 301 50.8
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 6.2e-73 278.5 319 49.2
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.4e-69 267.3 316 45.3
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 2.8e-57 226.5 218 51.8
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 1.4e-56 224.2 213 54.0
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 4.5e-55 219.2 422 28.9
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.0e-51 208.0 170 60.0
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 7.1e-45 185.3 346 32.7
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 1.2e-44 184.5 322 32.6
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 3.5e-44 183.0 103 78.6
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 4.2e-29 132.9 85 70.6
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 8.0e-12 75.5 228 27.2
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 2.3e-11 73.9 47 70.2
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 2.0e-07 60.8 31 77.4
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 2.0e-07 60.8 31 77.4
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 2.0e-07 60.8 31 77.4
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 2.0e-07 60.8 31 77.4
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 5.9e-07 59.3 31 74.2
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.0e-06 58.5 42 57.1


User provided reference genes

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