Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0053500 Rhododendron simsii HOM05D005442 ORTHO05D006450 9.7e-242 839.7 424 100.0
vmacro17319 Vaccinium macrocarpon HOM05D005442 ORTHO05D006450 1.1e-125 454.1 388 65.2
Actinidia21468 Actinidia chinensis HOM05D005442 ORTHO05D006450 2.8e-103 379.8 458 51.7
Actinidia39159 Actinidia chinensis HOM05D005442 ORTHO05D006450 8.9e-102 374.8 458 51.3
CSS0044298 Camellia sinensis var. sinensis HOM05D005442 ORTHO05D006450 6.0e-90 335.5 460 48.0
Actinidia32035 Actinidia chinensis HOM05D005442 ORTHO05D006450 2.1e-79 300.4 449 46.8
Dinv41924 Davidia involucrata HOM05D005442 ORTHO05D006450 4.2e-67 259.6 455 40.4
GSVIVG01023996001 Vitis vinifera HOM05D005442 ORTHO05D006450 4.0e-62 243.0 580 34.8
TAR369G0572 Trochodendron aralioides HOM05D005442 ORTHO05D006450 1.5e-61 241.1 515 36.3
Actinidia39161 Actinidia chinensis HOM05D005442 ORTHO05D006450 3.2e-59 233.4 351 45.6
TAR376G0424 Trochodendron aralioides HOM05D005442 ORTHO05D006450 1.6e-58 231.1 515 36.5
Hund06446 Selenicereus undatus HOM05D005442 ORTHO05D006450 8.7e-57 225.3 406 39.4
Cc09_g09800 Coffea canephora HOM05D005442 ORTHO05D006450 1.1e-56 224.9 421 37.8
Sc08g0002780 Simmondsia chinensis HOM05D005442 ORTHO05D006450 3.3e-56 223.4 404 42.3
QL11p051413 Quercus lobata HOM05D005442 ORTHO05D006450 1.3e-55 221.5 418 40.0
Nn1g06499 Nelumbo nucifera HOM05D005442 ORTHO05D006450 4.0e-54 216.5 391 40.7
CiPaw.05G084400 Carya illinoinensis HOM05D005442 ORTHO05D006450 4.5e-53 213.0 405 40.7
Haze_13370 Corylus avellana HOM05D005442 ORTHO05D006450 2.2e-52 210.7 230 52.2
Ciclev10028168m.g Citrus clementina HOM05D005442 ORTHO05D006450 4.9e-52 209.5 425 37.9
Sed0001500 Sechium edule HOM05D005442 ORTHO05D006450 4.2e-51 206.5 294 44.6
Sopen01g053760 Solanum pennellii HOM05D005442 ORTHO05D006450 7.1e-51 205.7 434 39.4
Thecc.02G056900 Theobroma cacao HOM05D005442 ORTHO05D006450 2.7e-50 203.8 396 38.1
Cc02_g27640 Coffea canephora HOM05D005442 ORTHO05D006450 1.8e-49 201.1 406 36.2
TWI31G1375 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 3.0e-49 200.3 396 37.6
Solyc01g111720.4 Solanum lycopersicum HOM05D005442 ORTHO05D006450 3.9e-49 199.9 437 38.2
PGSC0003DMG400006166 Solanum tuberosum HOM05D005442 ORTHO05D006450 3.9e-49 199.9 435 38.9
Eucgr.I01451 Eucalyptus grandis HOM05D005442 ORTHO05D006450 8.7e-49 198.7 380 41.1
Peaxi162Scf00362g00530 Petunia axillaris HOM05D005442 ORTHO05D006450 1.1e-48 198.4 457 36.1
MELO3C020828.2 Cucumis melo HOM05D005442 ORTHO05D006450 9.6e-48 195.3 280 45.0
CsaV3_2G016200 Cucumis sativus L. HOM05D005442 ORTHO05D006450 9.6e-48 195.3 280 45.0
ClCG02G012030 Citrullus lanatus HOM05D005442 ORTHO05D006450 1.3e-47 194.9 413 38.3
Manes.01G140900 Manihot esculenta HOM05D005442 ORTHO05D006450 2.8e-47 193.7 429 35.9
PSO675G1865 Papaver somniferum HOM05D005442 ORTHO05D006450 2.8e-47 193.7 382 39.5
Atru.chr5.3384 Acer truncatum HOM05D005442 ORTHO05D006450 4.0e-46 189.9 212 50.0
PSO541G1416 Papaver somniferum HOM05D005442 ORTHO05D006450 5.8e-45 186.0 285 44.6
ATR0763G134 Amborella trichopoda HOM05D005442 ORTHO05D006450 7.6e-45 185.7 245 46.5
Lj5A177G54 Lonicera japonica HOM05D005442 ORTHO05D006450 7.6e-45 185.7 318 42.5
PGR142G2067 Punica granatum HOM05D005442 ORTHO05D006450 1.7e-44 184.5 371 37.5
MBI11_g07617_MAGBIO Magnolia biondii HOM05D005442 ORTHO05D006450 3.8e-44 183.3 262 45.0
Aqoxy6G02079 Aquilegia oxysepala HOM05D005442 ORTHO05D006450 4.9e-44 183.0 281 42.0
Cpa.g.sc20.103 Carica papaya HOM05D005442 ORTHO05D006450 3.2e-43 180.3 411 36.3
EL10Ac9g21351 Beta vulgaris HOM05D005442 ORTHO05D006450 5.5e-43 179.5 249 41.4
MSTRG.16924 Avicennia marina HOM05D005442 ORTHO05D006450 2.7e-42 177.2 422 36.0
CANSAT56G0103 Cannabis sativa HOM05D005442 ORTHO05D006450 6.0e-42 176.0 241 46.5
Atru.chr3.3284 Acer truncatum HOM05D005442 ORTHO05D006450 1.3e-41 174.9 178 53.9
Lalb_Chr06g0163701 Lupinus albus HOM05D005442 ORTHO05D006450 6.7e-41 172.6 280 43.6
CDE04G0468 Ceratophyllum demersum HOM05D005442 ORTHO05D000996 2.5e-40 170.6 158 55.1
ECA233G3196 Erigeron canadensis HOM05D005442 ORTHO05D006450 2.5e-40 170.6 396 37.4
CDE02G3112 Ceratophyllum demersum HOM05D005442 ORTHO05D006450 4.3e-40 169.9 201 47.8
AUR62010020 Chenopodium quinoa HOM05D005442 ORTHO05D006450 5.6e-40 169.5 260 41.2
Ca_03302_v3 Cicer arietinum L. HOM05D005442 ORTHO05D006450 5.6e-40 169.5 282 41.8
Lsat_1_v5_gn_6_13820 Lactuca sativa HOM05D005442 ORTHO05D006450 1.6e-39 167.9 345 36.5
SGA_v2.0_scaffold58G20356 Striga asiatica HOM05D002097 ORTHO05D002248 4.0e-38 163.3 349 36.4
Gorai.005G254900 Gossypium raimondii HOM05D005442 ORTHO05D006450 5.3e-38 162.9 204 51.0
Lj5g0013939 Lotus japonicus HOM05D005442 ORTHO05D006450 5.3e-38 162.9 326 39.0
Gohir.A03G205700 Gossypium hirsutum HOM05D005442 ORTHO05D006450 6.9e-38 162.5 204 50.5
Gohir.D02G227000 Gossypium hirsutum HOM05D005442 ORTHO05D006450 9.0e-38 162.2 204 51.0
arahy.Tifrunner.gnm1.ann1.WUXL4S Arachis hypogaea HOM05D005442 ORTHO05D006450 1.2e-37 161.8 364 36.0
AUR62013010 Chenopodium quinoa HOM05D005442 ORTHO05D006450 1.5e-37 161.4 293 37.5
Os02g0101100 Oryza sativa ssp. japonica HOM05D005442 ORTHO05D006450 2.6e-37 160.6 168 52.4
unitig_744.g24278 Utricularia gibba HOM05D005442 ORTHO05D006450 2.6e-37 160.6 193 49.7
Sabra09G0106500 Salix brachista HOM05D005442 ORTHO05D006450 3.4e-37 160.2 262 39.3
arahy.Tifrunner.gnm1.ann1.ZGQ44R Arachis hypogaea HOM05D005442 ORTHO05D006450 4.5e-37 159.8 374 36.1
Medtr1g112820 Medicago truncatula HOM05D005442 ORTHO05D002291 1.3e-36 158.3 175 49.1
Glyma.20G106900 Glycine max HOM05D005442 ORTHO05D006450 3.8e-36 156.8 369 36.0
Psat6g232320 Pisum sativum HOM05D005442 ORTHO05D006450 7.1e-35 152.5 262 39.3
Duzib132G0277 Durio zibethinus HOM05D005442 ORTHO05D006450 9.3e-35 152.1 328 37.2
MD05G1123900 Malus domestica HOM05D005442 ORTHO05D006450 9.3e-35 152.1 203 44.8
Actinidia21470 Actinidia chinensis HOM05D005442 ORTHO05D006450 2.1e-34 151.0 228 46.9
Phvul.007G018400 Phaseolus vulgaris HOM05D005442 ORTHO05D006450 2.1e-34 151.0 236 41.1
Zm00001eb134390 Zea mays HOM05D005442 ORTHO05D006450 2.7e-34 150.6 392 33.4
HPP92_022180 Vanilla planifolia HOM05D005442 ORTHO05D006450 1.0e-33 148.7 365 35.6
HPP92_022198 Vanilla planifolia HOM05D005442 ORTHO05D006450 1.0e-33 148.7 363 36.4
Migut.B00066 Erythranthe guttata HOM05D005442 ORTHO05D006450 7.4e-32 142.5 410 31.2
FvH4_2g15550 Fragaria vesca HOM05D005442 ORTHO05D006450 2.2e-31 141.0 163 47.2
FAN24G2500 Fragaria x ananassa HOM05D005442 ORTHO05D006450 2.2e-31 141.0 163 47.2
SalBow1G0486 Salvia bowleyana HOM05D005442 ORTHO05D006450 2.8e-31 140.6 427 30.7
Glyma.10G282700 Glycine max HOM05D005442 ORTHO05D006450 4.8e-31 139.8 271 36.9
FAN15G0807 Fragaria x ananassa HOM05D005442 ORTHO05D006450 3.1e-30 137.1 406 30.8
DCAR_011887 Daucus carota HOM05D005442 ORTHO05D006450 4.1e-30 136.7 210 39.5
FAN27G2972 Fragaria x ananassa HOM05D005442 ORTHO05D006450 2.0e-29 134.4 406 30.3
COL.COLO4_17367 Corchorus olitorius HOM05D005442 ORTHO05D006450 5.9e-29 132.9 239 39.7
VMungo0720G2182 Vigna mungo HOM05D005442 ORTHO05D006450 7.7e-29 132.5 229 39.3
THA.LOC104807379 Tarenaya hassleriana HOM05D005442 ORTHO05D006450 1.0e-28 132.1 226 42.5
Aa31LG8G14120 Aethionema arabicum HOM05D005442 ORTHO05D006450 1.3e-28 131.7 282 35.5
SHI05769 Sapria himalayana HOM05D005442 ORTHO05D006450 1.3e-28 131.7 443 28.9
HPP92_028071 Vanilla planifolia HOM05D005442 ORTHO05D006450 3.8e-28 130.2 438 32.0
RcHm_v2.0_Chr6g0278721 Rosa chinensis HOM05D005442 ORTHO05D006450 5.0e-28 129.8 386 31.1
Cfa023336 Carpinus fangiana HOM05D005442 ORTHO05D006450 5.5e-27 126.3 267 37.1
HanXRQChr08g0227271 Helianthus annuus HOM05D005442 ORTHO05D006450 9.4e-27 125.6 325 32.6
Prupe.8G167900 Prunus persica HOM05D005442 ORTHO05D006450 3.6e-26 123.6 390 31.3
FAN20G2789 Fragaria x ananassa HOM05D005442 ORTHO05D006450 7.9e-26 122.5 403 29.3
CARHR033820 Cardamine hirsuta HOM05D005442 ORTHO05D006450 8.8e-25 119.0 261 34.5
Sp3g30220 Schrenkiella parvula HOM05D005442 ORTHO05D006450 2.5e-24 117.5 215 37.7
Thhalv10022629m.g Eutrema salsugineum HOM05D005442 ORTHO05D006450 1.7e-23 114.8 261 35.2
BcaB03g16428 Brassica carinata HOM05D005442 ORTHO05D006450 8.2e-23 112.5 284 33.5
BcaC06g36199 Brassica carinata HOM05D005442 ORTHO05D006450 8.2e-23 112.5 270 34.8
C07p06570 Brassica napus HOM05D005442 ORTHO05D006450 8.2e-23 112.5 270 34.8
BolC7t41079H Brassica oleracea HOM05D005442 ORTHO05D006450 8.2e-23 112.5 270 34.8
A07p04140 Brassica napus HOM05D005442 ORTHO05D006450 4.1e-22 110.2 225 36.0
BraA07t28205Z Brassica rapa HOM05D005442 ORTHO05D006450 4.1e-22 110.2 225 36.0
CAN.G588.92 Capsicum annuum HOM05D005442 ORTHO05D006450 1.2e-21 108.6 154 45.5
Carub.0001s3251 Capsella rubella HOM05D005442 ORTHO05D006450 1.7e-20 104.8 263 30.4
Ah.01g023170 Amaranthus hybridus HOM05D005442 ORTHO05D006450 5.0e-20 103.2 290 32.1
AT1G34360 Arabidopsis thaliana HOM05D005442 ORTHO05D006450 8.5e-20 102.4 288 30.6
AL1G48920 Arabidopsis lyrata HOM05D005442 ORTHO05D006450 2.5e-19 100.9 268 32.1
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 2.5e-19 100.9 124 47.6
Mapoly0037s0141 Marchantia polymorpha HOM05D005442 ORTHO05D006450 1.6e-18 98.2 154 38.3
TPR.G2470 Trifolium pratense HOM05D005442 ORTHO05D006450 6.1e-18 96.3 189 37.0
Oeu032532.1 Olea europaea HOM05D005442 ORTHO05D006450 5.1e-17 93.2 174 37.4
Pp3c27_2790 Physcomitrium patens HOM05D005442 ORTHO05D006450 2.0e-16 91.3 169 37.9
Pp3c16_14950 Physcomitrium patens HOM05D005442 ORTHO05D006450 7.4e-16 89.4 192 34.4
Rhsim09G0155200 Rhododendron simsii HOM05D005442 ORTHO05D006450 1.2e-13 82.0 50 76.0
Actinidia21472 Actinidia chinensis HOM05D005442 ORTHO05D006450 1.5e-11 75.1 140 38.6
Lj5A177G53 Lonicera japonica HOM05D005442 ORTHO05D006450 7.2e-11 72.8 77 50.6
TWI79G1761 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 7.2e-11 72.8 61 62.3
Potri.009G137000 Populus trichocarpa HOM05D005442 ORTHO05D006450 1.2e-10 72.0 275 31.3
AagrBONN_evm.TU.Sc2ySwM_344.3952 Anthoceros agrestis HOM05D005442 ORTHO05D006450 1.6e-10 71.6 186 29.6
MD10G1126600 Malus domestica HOM05D005442 ORTHO05D006450 3.6e-10 70.5 103 38.8
Nitab4.5_0003698g0060 Nicotiana tabacum HOM05D005442 ORTHO05D006450 6.1e-10 69.7 267 29.2
SMO171G0119 Selaginella moellendorffii HOM05D005442 ORTHO05D006450 2.3e-09 67.8 185 28.6
CBR_g29438 Chara braunii HOM05D005442 ORTHO05D006450 1.7e-07 61.6 149 29.5
SEGI_20616 Sequoiadendron giganteum HOM05D042574 ORTHO05D384790 8.2e-07 59.3 109 36.7
SEGI_40313 Sequoiadendron giganteum HOM05D042574 ORTHO05D384823 8.2e-07 59.3 109 36.7
Oeu015514.1 Olea europaea HOM05D005442 ORTHO05D006450 1.8e-06 58.2 36 69.4


User provided reference genes

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