Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 4.3e-74 281.2 138 100.0
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 2.8e-65 251.9 138 89.1
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 2.8e-65 251.9 138 89.1
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 7.7e-63 243.8 138 87.0
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 5.0e-62 241.1 139 87.1
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 5.0e-62 241.1 139 87.1
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 6.1e-60 234.2 138 82.6
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 1.0e-59 233.4 138 83.3
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 5.1e-59 231.1 138 79.7
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 1.1e-58 229.9 138 81.9
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 4.4e-58 228.0 138 81.9
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 7.4e-58 227.3 138 80.4
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 8.2e-57 223.8 138 80.4
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 8.2e-57 223.8 137 81.0
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 1.1e-56 223.4 138 79.7
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 1.4e-56 223.0 138 80.4
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 1.4e-56 223.0 138 79.0
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 1.4e-56 223.0 138 79.0
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 2.4e-56 222.2 135 80.7
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 2.4e-56 222.2 138 78.3
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 2.4e-56 222.2 138 79.0
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 3.1e-56 221.9 138 77.5
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 3.1e-56 221.9 138 80.4
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 3.1e-56 221.9 138 79.7
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 4.1e-56 221.5 135 80.7
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 4.1e-56 221.5 138 78.3
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 4.1e-56 221.5 139 77.7
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 5.3e-56 221.1 138 78.3
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 7.0e-56 220.7 138 78.3
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 9.1e-56 220.3 138 79.7
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 9.1e-56 220.3 138 79.7
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 1.2e-55 219.9 136 78.7
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 1.5e-55 219.5 138 79.7
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 2.0e-55 219.2 138 76.8
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 2.6e-55 218.8 138 77.5
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 2.6e-55 218.8 138 77.5
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 4.5e-55 218.0 135 80.7
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 5.9e-55 217.6 138 76.1
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 5.9e-55 217.6 138 76.1
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 7.7e-55 217.2 138 78.3
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 1.3e-54 216.5 138 78.3
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.7e-54 216.1 138 76.1
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 1.7e-54 216.1 138 78.3
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 1.7e-54 216.1 134 76.1
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 1.7e-54 216.1 138 76.1
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 2.2e-54 215.7 138 74.6
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 3.8e-54 214.9 139 74.8
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 3.8e-54 214.9 138 76.8
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 8.5e-54 213.8 139 77.0
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 1.1e-53 213.4 138 76.8
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 1.5e-53 213.0 137 78.8
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 1.5e-53 213.0 136 76.5
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 1.5e-53 213.0 138 76.8
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 1.5e-53 213.0 138 75.4
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 1.9e-53 212.6 138 76.1
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 3.2e-53 211.8 137 78.8
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 3.2e-53 211.8 134 79.1
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 5.5e-53 211.1 147 73.5
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 5.5e-53 211.1 138 76.1
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 7.2e-53 210.7 138 72.5
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 7.2e-53 210.7 139 75.5
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 1.2e-52 209.9 138 77.5
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 1.6e-52 209.5 138 75.4
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 2.7e-52 208.8 138 72.5
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 2.7e-52 208.8 138 76.8
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 3.6e-52 208.4 136 75.7
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 4.7e-52 208.0 138 78.3
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 6.1e-52 207.6 138 71.0
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 6.1e-52 207.6 139 74.8
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 6.1e-52 207.6 139 75.5
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 6.1e-52 207.6 131 77.1
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 8.0e-52 207.2 138 74.6
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 1.0e-51 206.8 143 70.6
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 1.0e-51 206.8 138 72.5
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 3.0e-51 205.3 131 74.8
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 3.0e-51 205.3 138 77.5
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 5.2e-51 204.5 138 72.5
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 6.7e-51 204.1 137 72.3
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 6.7e-51 204.1 138 74.6
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 6.7e-51 204.1 138 77.5
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 1.1e-50 203.4 138 77.5
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 1.1e-50 203.4 138 77.5
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 1.5e-50 203.0 138 71.7
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 2.0e-50 202.6 138 72.5
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 4.4e-50 201.4 132 74.2
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 7.4e-50 200.7 138 76.8
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 2.2e-49 199.1 139 71.9
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 1.1e-48 196.8 146 66.4
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 1.1e-48 196.8 146 66.4
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 1.1e-48 196.8 146 66.4
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 1.1e-48 196.8 146 66.4
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 2.4e-48 195.7 138 70.3
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 3.1e-48 195.3 138 68.8
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 3.1e-48 195.3 138 70.3
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.6e-47 193.0 133 69.2
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 3.5e-47 191.8 113 76.1
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 1.0e-46 190.3 118 76.3
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 2.9e-46 188.7 113 76.1
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 6.5e-46 187.6 115 73.9
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 8.5e-46 187.2 113 75.2
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 1.1e-45 186.8 115 73.9
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 1.5e-45 186.4 115 73.0
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 2.5e-45 185.7 115 73.9
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 4.2e-45 184.9 133 69.2
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 4.2e-45 184.9 133 69.2
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 5.5e-45 184.5 107 77.6
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 5.5e-45 184.5 107 77.6
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 5.5e-45 184.5 107 77.6
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 7.2e-45 184.1 120 68.3
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 9.4e-45 183.7 113 72.6
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 1.6e-44 183.0 107 76.6
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 1.6e-44 183.0 107 76.6
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 2.7e-44 182.2 118 68.6
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 1.0e-43 180.3 108 75.0
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 2.3e-43 179.1 133 66.9
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 2.0e-42 176.0 120 73.3
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 3.4e-42 175.3 114 78.1
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 4.4e-42 174.9 131 65.6
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 5.4e-40 167.9 133 65.4
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 1.3e-38 163.3 97 74.2
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 2.7e-36 155.6 93 73.1
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 2.7e-36 155.6 138 60.9
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 1.2e-34 150.2 81 93.8
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 9.8e-34 147.1 137 55.5
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 3.1e-32 142.1 84 73.8
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 7.7e-31 137.5 118 62.7
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 1.5e-29 133.3 129 56.6
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 6.1e-28 127.9 110 56.4
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 1.0e-27 127.1 70 88.6
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 5.2e-27 124.8 122 57.4
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 6.3e-25 117.9 136 50.7
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 1.8e-24 116.3 72 68.1
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 1.8e-24 116.3 123 47.2
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 2.7e-23 112.5 59 79.7
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 9.5e-21 104.0 87 58.6
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 1.2e-20 103.6 117 47.9
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 3.6e-20 102.1 83 66.3
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 8.0e-20 100.9 151 40.4
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 1.0e-19 100.5 59 71.2
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 2.3e-19 99.4 76 72.4
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 2.6e-18 95.9 75 64.0
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 2.7e-15 85.9 79 58.2
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 3.5e-15 85.5 59 64.4
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 1.9e-13 79.7 80 51.2
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 9.5e-13 77.4 107 40.2
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 4.7e-12 75.1 139 38.8
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 1.7e-09 66.6 81 44.4
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 3.7e-09 65.5 78 51.3
CSS0036753 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113366 7.8e-07 57.8 62 61.3


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