Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0089500 Rhododendron simsii HOM05D001817 ORTHO05D001647 6.5e-69 263.8 126 100.0
Rhsim04G0091300 Rhododendron simsii HOM05D001817 ORTHO05D001647 2.3e-45 185.7 125 71.2
Rhsim04G0092600 Rhododendron simsii HOM05D001817 ORTHO05D001647 3.9e-45 184.9 124 71.0
Glyma.10G113700 Glycine max HOM05D001817 ORTHO05D001647 6.9e-18 94.4 116 40.5
Duzib052G0237 Durio zibethinus HOM05D001817 ORTHO05D001647 3.4e-17 92.0 122 35.2
Solyc10g054673.1 Solanum lycopersicum HOM05D001817 ORTHO05D001647 7.6e-17 90.9 126 38.9
Glyma.10G114100 Glycine max HOM05D001817 ORTHO05D001647 2.9e-16 89.0 122 39.3
Prupe.1G484000 Prunus persica HOM05D001817 ORTHO05D001647 3.8e-16 88.6 116 32.8
CANSAT25G3871 Cannabis sativa HOM05D001817 ORTHO05D001647 6.4e-16 87.8 111 37.8
Solyc10g054677.1 Solanum lycopersicum HOM05D001817 ORTHO05D001647 6.4e-16 87.8 126 38.1
Prupe.1G484200 Prunus persica HOM05D001817 ORTHO05D001647 8.4e-16 87.4 132 37.9
VMungo0720G0118 Vigna mungo HOM05D001817 ORTHO05D001647 8.4e-16 87.4 106 41.5
Lalb_Chr07g0186901 Lupinus albus HOM05D001817 ORTHO05D001647 1.1e-15 87.0 122 33.6
Thecc.02G154600 Theobroma cacao HOM05D001817 ORTHO05D001647 1.1e-15 87.0 122 32.8
RcHm_v2.0_Chr6g0297451 Rosa chinensis HOM05D001817 ORTHO05D001647 1.9e-15 86.3 127 39.4
Phvul.007G239600 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 3.2e-15 85.5 101 42.6
Lalb_Chr03g0036441 Lupinus albus HOM05D001817 ORTHO05D001647 5.4e-15 84.7 114 41.2
arahy.Tifrunner.gnm1.ann1.J1V55D Arachis hypogaea HOM05D001817 ORTHO05D001647 9.3e-15 84.0 111 38.7
arahy.Tifrunner.gnm1.ann1.SUQM4P Arachis hypogaea HOM05D001817 ORTHO05D001647 9.3e-15 84.0 111 38.7
Lj4g0011737 Lotus japonicus HOM05D001817 ORTHO05D001647 9.3e-15 84.0 108 32.4
Thecc.02G154500 Theobroma cacao HOM05D001817 ORTHO05D001647 9.3e-15 84.0 122 33.6
VMungo0540G2413 Vigna mungo HOM05D001817 ORTHO05D001647 1.2e-14 83.6 114 36.8
FvH4_2g28690 Fragaria vesca HOM05D001817 ORTHO05D001647 2.1e-14 82.8 118 33.9
Lj6g0004190 Lotus japonicus HOM05D001817 ORTHO05D001647 3.5e-14 82.0 116 37.9
Sed0010450 Sechium edule HOM05D001817 ORTHO05D001647 3.5e-14 82.0 122 31.1
Glyma.17G218100 Glycine max HOM05D001817 ORTHO05D001647 7.9e-14 80.9 114 34.2
Lj6g0012802 Lotus japonicus HOM05D001817 ORTHO05D001647 7.9e-14 80.9 116 36.2
Psat0s3990g0120 Pisum sativum HOM05D001817 ORTHO05D001647 7.9e-14 80.9 110 35.5
VMungo0464G0399 Vigna mungo HOM05D001817 ORTHO05D001647 7.9e-14 80.9 92 42.4
Sc06g0000520 Simmondsia chinensis HOM05D001817 ORTHO05D001647 1.3e-13 80.1 106 31.1
Medtr1g048300 Medicago truncatula HOM05D001817 ORTHO05D001647 1.7e-13 79.7 111 33.3
Phvul.006G043500 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.7e-13 79.7 114 35.1
CsaV3_6G045660 Cucumis sativus L. HOM05D001817 ORTHO05D001647 2.3e-13 79.3 119 33.6
Medtr1g049240 Medicago truncatula HOM05D001817 ORTHO05D001647 2.3e-13 79.3 117 36.8
Phvul.002G171300 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 2.3e-13 79.3 112 32.1
RcHm_v2.0_Chr6g0297461 Rosa chinensis HOM05D001817 ORTHO05D001647 2.3e-13 79.3 95 34.7
Sed0025130 Sechium edule HOM05D001817 ORTHO05D001647 2.3e-13 79.3 116 35.3
Eucgr.C02739 Eucalyptus grandis HOM05D001817 ORTHO05D001647 3.0e-13 79.0 112 37.5
FvH4_2g27480 Fragaria vesca HOM05D001817 ORTHO05D001647 3.0e-13 79.0 121 31.4
FAN15G2483 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.0e-13 79.0 118 32.2
FAN24G1722 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.0e-13 79.0 118 32.2
CAN.G111.7 Capsicum annuum HOM05D001817 ORTHO05D001647 3.9e-13 78.6 92 35.9
FAN04G2963 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.9e-13 78.6 110 36.4
FAN08G2754 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.9e-13 78.6 110 36.4
FAN18G1420 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.9e-13 78.6 110 36.4
Manes.02G218600 Manihot esculenta HOM05D001817 ORTHO05D001647 3.9e-13 78.6 119 31.9
FAN04G1340 Fragaria x ananassa HOM05D001817 ORTHO05D001647 5.1e-13 78.2 110 36.4
FAN20G0384 Fragaria x ananassa HOM05D000140 ORTHO05D000087 5.1e-13 78.2 113 32.7
Lj3g0023162 Lotus japonicus HOM05D001817 ORTHO05D001647 8.7e-13 77.4 114 33.3
Phvul.010G051700 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 8.7e-13 77.4 111 35.1
MELO3C033004.2 Cucumis melo HOM05D001817 ORTHO05D001647 1.1e-12 77.0 112 34.8
FAN24G1684 Fragaria x ananassa HOM05D001817 ORTHO05D001647 1.1e-12 77.0 84 38.1
Sopen10g024580 Solanum pennellii HOM05D001817 ORTHO05D001647 1.1e-12 77.0 82 42.7
TAR622G0422 Trochodendron aralioides HOM05D001817 ORTHO05D001647 1.1e-12 77.0 92 31.5
MBI07_g02003_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 1.9e-12 76.3 98 29.6
Rhsim04G0092100 Rhododendron simsii HOM05D001817 ORTHO05D001647 1.9e-12 76.3 105 35.2
TWI63G1514 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 1.9e-12 76.3 126 34.9
FvH4_5g25410 Fragaria vesca HOM05D001817 ORTHO05D001647 2.5e-12 75.9 105 32.4
FAN18G2855 Fragaria x ananassa HOM05D001817 ORTHO05D001647 2.5e-12 75.9 105 32.4
Sed0003760 Sechium edule HOM05D001817 ORTHO05D001647 2.5e-12 75.9 115 35.7
TAR622G1058 Trochodendron aralioides HOM05D001817 ORTHO05D001647 2.5e-12 75.9 106 30.2
arahy.Tifrunner.gnm1.ann1.XI4PYL Arachis hypogaea HOM05D001817 ORTHO05D001647 4.3e-12 75.1 114 33.3
arahy.Tifrunner.gnm1.ann1.DUNV2U Arachis hypogaea HOM05D001817 ORTHO05D001647 5.6e-12 74.7 118 33.1
Glyma.10G271300 Glycine max HOM05D001817 ORTHO05D001647 5.6e-12 74.7 119 30.3
DCAR_015990 Daucus carota HOM05D001817 ORTHO05D001647 7.4e-12 74.3 104 32.7
Lj4g0014854 Lotus japonicus HOM05D001817 ORTHO05D001647 9.6e-12 73.9 116 35.3
Phvul.004G057100 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 9.6e-12 73.9 116 36.2
Atru.chr6.250 Acer truncatum HOM05D001817 ORTHO05D001647 1.3e-11 73.6 114 28.1
Duzib150G1023 Durio zibethinus HOM05D001817 ORTHO05D001647 1.3e-11 73.6 118 35.6
VMungo0720G3158 Vigna mungo HOM05D001817 ORTHO05D001647 1.3e-11 73.6 112 33.9
FAN27G2147 Fragaria x ananassa HOM05D001817 ORTHO05D001647 1.6e-11 73.2 107 32.7
Lalb_Chr12g0205711 Lupinus albus HOM05D001817 ORTHO05D001647 1.6e-11 73.2 83 38.6
MD15G1128900 Malus domestica HOM05D001817 ORTHO05D001647 1.6e-11 73.2 102 37.3
TPR.G9069 Trifolium pratense HOM05D001817 ORTHO05D001647 1.6e-11 73.2 110 30.9
CiPaw.08G009300 Carya illinoinensis HOM05D001817 ORTHO05D001647 2.1e-11 72.8 108 31.5
Dinv26451 Davidia involucrata HOM05D001817 ORTHO05D001647 2.1e-11 72.8 103 35.0
TPR.G3270 Trifolium pratense HOM05D001817 ORTHO05D001647 2.1e-11 72.8 116 35.3
EL10Ac6g15442 Beta vulgaris HOM05D001817 ORTHO05D001647 2.8e-11 72.4 119 31.1
Ca_03322_v3 Cicer arietinum L. HOM05D001817 ORTHO05D001647 2.8e-11 72.4 116 37.1
Lj4g0019656 Lotus japonicus HOM05D001817 ORTHO05D001647 2.8e-11 72.4 116 32.8
Lalb_Chr07g0186891 Lupinus albus HOM05D001817 ORTHO05D001647 2.8e-11 72.4 101 33.7
AUR62029426 Chenopodium quinoa HOM05D001817 ORTHO05D001647 4.8e-11 71.6 115 30.4
Hund04268 Selenicereus undatus HOM05D008125 ORTHO05D010359 4.8e-11 71.6 122 30.3
TWI34G0730 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 4.8e-11 71.6 116 31.9
Glyma.10G113900 Glycine max HOM05D001817 ORTHO05D001647 6.2e-11 71.2 93 40.9
Phvul.007G030500 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 6.2e-11 71.2 112 32.1
TAR622G0534 Trochodendron aralioides HOM05D001817 ORTHO05D001647 6.2e-11 71.2 124 29.8
FAN24G2789 Fragaria x ananassa HOM05D001817 ORTHO05D001647 8.1e-11 70.9 117 32.5
Phvul.007G030200 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 8.1e-11 70.9 112 32.1
Prupe.1G484100 Prunus persica HOM05D001817 ORTHO05D001647 8.1e-11 70.9 118 29.7
FAN27G0609 Fragaria x ananassa HOM05D001817 ORTHO05D001647 1.1e-10 70.5 82 36.6
VMungo0331G0739 Vigna mungo HOM05D001817 ORTHO05D001647 1.1e-10 70.5 118 30.5
Glyma.08G357100 Glycine max HOM05D001817 ORTHO05D001647 1.4e-10 70.1 106 32.1
HPP92_021712 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.4e-10 70.1 108 29.6
CDE05G1510 Ceratophyllum demersum HOM05D000485 ORTHO05D000341 1.8e-10 69.7 96 32.3
Lalb_Chr13g0294721 Lupinus albus HOM05D001817 ORTHO05D001647 1.8e-10 69.7 97 37.1
Medtr6g445140 Medicago truncatula HOM05D001817 ORTHO05D001647 3.1e-10 68.9 115 31.3
TWI34G0812 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 3.1e-10 68.9 91 36.3
Glyma.18G276100 Glycine max HOM05D001817 ORTHO05D001647 4.0e-10 68.6 117 33.3
Lalb_Chr21g0316231 Lupinus albus HOM05D001817 ORTHO05D001647 4.0e-10 68.6 116 29.3
HPP92_021690 Vanilla planifolia HOM05D001817 ORTHO05D001647 4.0e-10 68.6 108 29.6
FvH4_2g28712 Fragaria vesca HOM05D001817 ORTHO05D001647 5.3e-10 68.2 107 27.1
Phvul.009G216600 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 5.3e-10 68.2 119 27.7
Sc03g0006280 Simmondsia chinensis HOM05D001817 ORTHO05D001647 5.3e-10 68.2 117 31.6
THA.LOC104818604 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 5.3e-10 68.2 126 33.3
THA.LOC104818610 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 5.3e-10 68.2 126 33.3
TWI63G0410 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 5.3e-10 68.2 139 27.3
Lj6g0014356 Lotus japonicus HOM05D001817 ORTHO05D001647 6.9e-10 67.8 116 32.8
Phvul.009G216700 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 6.9e-10 67.8 117 29.1
Glyma.09G085400 Glycine max HOM05D001817 ORTHO05D001647 9.0e-10 67.4 106 32.1
TPR.G8 Trifolium pratense HOM05D001817 ORTHO05D001647 9.0e-10 67.4 87 35.6
AL7G19800 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 1.5e-09 66.6 101 36.6
AUR62012432 Chenopodium quinoa HOM05D001817 ORTHO05D001647 2.0e-09 66.2 95 31.6
Glyma.10G186200 Glycine max HOM05D001817 ORTHO05D001647 2.0e-09 66.2 95 33.7
PSO675G1843 Papaver somniferum HOM05D001817 ORTHO05D001647 2.6e-09 65.9 105 28.6
Thhalv10001075m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 3.4e-09 65.5 109 33.0
Lj4g0020170 Lotus japonicus HOM05D001817 ORTHO05D001647 4.5e-09 65.1 84 36.9
Lalb_Chr13g0294711 Lupinus albus HOM05D001817 ORTHO05D001647 4.5e-09 65.1 72 36.1
Lj4g0004287 Lotus japonicus HOM05D001817 ORTHO05D001647 9.9e-09 63.9 120 28.3
Medtr0100s0140 Medicago truncatula HOM05D001817 ORTHO05D001647 9.9e-09 63.9 116 31.0
Carub.0007s0846 Capsella rubella HOM05D001817 ORTHO05D001647 1.3e-08 63.5 120 32.5
Phvul.001G045800 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.3e-08 63.5 109 28.4
Glyma.05G150900 Glycine max HOM05D001817 ORTHO05D001647 1.7e-08 63.2 114 30.7
Medtr2g063010 Medicago truncatula HOM05D001817 ORTHO05D001647 1.7e-08 63.2 101 29.7
arahy.Tifrunner.gnm1.ann1.H9XFHY Arachis hypogaea HOM05D001817 ORTHO05D001647 3.8e-08 62.0 110 30.0
ATR0582G316 Amborella trichopoda HOM05D001817 ORTHO05D001647 4.9e-08 61.6 105 25.7
arahy.Tifrunner.gnm1.ann1.8W5KIC Arachis hypogaea HOM05D001817 ORTHO05D001647 4.9e-08 61.6 107 27.1
EL10Ac2g04174 Beta vulgaris HOM05D001817 ORTHO05D001647 4.9e-08 61.6 109 28.4
arahy.Tifrunner.gnm1.ann1.36N5BX Arachis hypogaea HOM05D001817 ORTHO05D001647 6.4e-08 61.2 108 28.7
Glyma.20G204300 Glycine max HOM05D001817 ORTHO05D001647 1.1e-07 60.5 119 31.1
Medtr2g438190 Medicago truncatula HOM05D001817 ORTHO05D001647 1.1e-07 60.5 116 24.1
VMungo0720G1259 Vigna mungo HOM05D001817 ORTHO05D001647 1.2e-06 57.0 94 29.8
Zm00001eb130070 Zea mays HOM05D001648 ORTHO05D001657 1.2e-06 57.0 84 33.3
arahy.Tifrunner.gnm1.ann1.QWA25E Arachis hypogaea HOM05D001817 ORTHO05D001647 2.1e-06 56.2 109 29.4
C07p59090 Brassica napus HOM05D001817 ORTHO05D001647 2.1e-06 56.2 113 31.0
BolC7t46357H Brassica oleracea HOM05D001817 ORTHO05D001647 2.1e-06 56.2 113 31.0
TPR.G35354 Trifolium pratense HOM05D001817 ORTHO05D001647 3.5e-06 55.5 115 33.0
PSO675G1869 Papaver somniferum HOM05D001817 ORTHO05D001647 7.9e-06 54.3 112 25.0


User provided reference genes

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