Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.3e-271 938.3 478 100.0
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 2.7e-216 755.4 466 83.0
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.0e-211 739.2 471 79.4
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.9e-210 735.3 471 79.2
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.3e-206 721.8 472 80.9
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 2.4e-204 715.7 478 76.4
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 3.6e-184 648.7 463 70.8
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 5.7e-182 641.3 473 69.3
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.7e-181 639.8 462 75.8
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 8.3e-181 637.5 473 68.7
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.8e-180 636.3 442 71.5
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 7.7e-179 630.9 476 66.6
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.0e-178 630.6 473 67.9
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 1.2e-176 623.6 467 67.2
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 8.0e-176 620.9 477 66.7
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 6.8e-175 617.8 478 67.8
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 6.8e-175 617.8 472 66.5
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 8.8e-175 617.5 476 64.5
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 3.7e-173 612.1 473 66.8
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 8.3e-173 610.9 449 68.8
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 1.4e-172 610.1 475 66.5
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 4.1e-172 608.6 454 67.6
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 7.0e-172 607.8 452 67.9
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 9.1e-172 607.4 476 66.0
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.6e-171 606.7 474 65.0
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 5.9e-171 604.7 452 67.5
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 7.7e-171 604.4 473 65.3
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 1.7e-170 603.2 440 69.5
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 2.3e-170 602.8 473 65.5
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.9e-170 602.4 476 64.5
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 1.1e-169 600.5 452 67.3
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 3.3e-169 599.0 472 63.3
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 3.3e-169 599.0 474 64.1
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 9.5e-169 597.4 453 67.1
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 3.6e-168 595.5 460 66.5
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 8.0e-168 594.3 460 65.7
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 2.0e-166 589.7 454 67.0
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 7.5e-166 587.8 443 65.5
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 1.7e-165 586.6 411 72.0
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 2.2e-165 586.3 471 62.8
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 2.9e-165 585.9 441 66.2
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 3.7e-165 585.5 474 62.0
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 6.4e-165 584.7 472 62.5
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 2.4e-164 582.8 442 64.5
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.0e-162 577.4 443 63.4
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.3e-162 577.0 486 64.6
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 3.0e-162 575.9 446 65.7
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 3.0e-162 575.9 450 63.6
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 3.9e-162 575.5 476 62.6
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 8.6e-162 574.3 478 63.6
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 1.1e-161 573.9 476 63.7
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.5e-161 573.5 446 65.5
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 4.3e-161 572.0 467 62.3
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 7.3e-161 571.2 458 64.4
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 7.3e-161 571.2 472 64.2
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 9.5e-161 570.9 473 63.6
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.2e-160 570.5 478 62.6
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.6e-160 568.9 475 64.6
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 6.2e-160 568.2 465 62.4
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 4.0e-159 565.5 472 60.8
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 5.2e-159 565.1 458 64.6
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 3.7e-157 558.9 446 64.8
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 6.4e-157 558.1 430 66.0
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 6.0e-155 551.6 449 62.4
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 7.8e-155 551.2 467 61.7
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 2.9e-149 532.7 459 59.5
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.1e-148 530.8 453 60.7
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 4.1e-148 528.9 443 62.3
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 4.1e-148 528.9 441 61.7
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 1.2e-147 527.3 447 61.5
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 3.9e-146 522.3 461 60.1
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 3.3e-145 519.2 468 59.6
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 7.3e-145 518.1 454 59.9
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 6.2e-144 515.0 469 59.5
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 1.8e-143 513.5 469 59.7
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 4.0e-143 512.3 479 56.6
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 4.0e-143 512.3 469 59.3
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 8.9e-143 511.1 506 55.9
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.3e-141 507.3 406 69.5
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 1.2e-139 500.7 500 55.8
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 2.1e-136 490.0 761 41.5
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 2.8e-136 489.6 366 67.2
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 4.7e-136 488.8 439 56.7
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 2.9e-133 479.6 459 54.9
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 3.8e-133 479.2 446 55.8
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.8e-127 460.3 440 55.2
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 1.1e-124 451.1 389 61.7
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 1.7e-117 427.2 342 61.4
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 3.8e-117 426.0 329 62.9
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 3.2e-116 422.9 450 48.9
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 7.1e-116 421.8 347 62.8
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 9.3e-116 421.4 322 66.5
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 5.3e-111 405.6 326 64.1
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 4.5e-110 402.5 325 63.1
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.4e-103 380.9 326 60.7
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 1.8e-103 380.6 443 47.0
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 6.9e-103 378.6 374 51.6
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 2.9e-101 373.2 377 47.5
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 6.7e-98 362.1 411 47.4
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 1.3e-96 357.8 327 58.4
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 3.6e-91 339.7 331 54.7
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.8e-90 337.4 255 66.3
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 1.1e-81 308.1 364 49.2
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.6e-73 280.4 216 65.3
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 1.3e-72 278.1 217 63.1
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 2.4e-71 273.9 236 60.2
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.5e-68 264.6 217 61.8
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.7e-67 260.4 443 38.6
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 3.1e-63 246.9 185 63.8
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 2.8e-59 233.8 214 60.3
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 8.9e-50 202.2 135 73.3
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 2.2e-48 197.6 128 77.3
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 5.0e-45 186.4 231 45.5
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.8e-42 177.9 170 55.3
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 5.2e-42 176.4 142 63.4
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 1.0e-37 162.2 132 62.1
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 4.9e-32 143.3 104 67.3
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 8.3e-32 142.5 128 57.0
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 2.9e-24 117.5 105 50.5
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 1.3e-21 108.6 405 25.9
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 2.5e-20 104.4 400 25.5
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 5.6e-20 103.2 75 68.0
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 1.2e-19 102.1 406 23.9
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 5.8e-17 93.2 150 40.7
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 3.9e-13 80.5 58 69.0
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 1.3e-11 75.5 391 23.3
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.4e-07 62.0 46 65.2


User provided reference genes

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