Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 6.5e-76 287.3 149 100.0
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 3.0e-28 129.0 146 61.0
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 2.1e-21 106.3 146 46.6
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 1.1e-19 100.5 138 47.8
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.5e-19 99.4 186 39.8
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.5e-19 99.4 186 39.8
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 8.1e-18 94.4 145 44.1
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.4e-17 92.8 145 43.4
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 2.4e-17 92.8 185 37.8
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 3.1e-17 92.4 145 43.4
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 4.0e-17 92.0 145 42.8
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 9.0e-17 90.9 147 42.2
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.2e-16 90.5 144 41.7
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 2.6e-16 89.4 147 42.9
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 3.4e-16 89.0 146 42.5
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 4.5e-16 88.6 145 40.0
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 5.8e-16 88.2 138 41.3
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 5.8e-16 88.2 144 42.4
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 7.6e-16 87.8 147 40.8
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 7.6e-16 87.8 145 42.1
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 7.6e-16 87.8 145 41.4
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 7.6e-16 87.8 145 41.4
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 9.9e-16 87.4 146 41.8
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 9.9e-16 87.4 145 41.4
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-15 86.7 51 78.4
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 1.7e-15 86.7 145 42.1
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 2.2e-15 86.3 139 41.0
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 2.2e-15 86.3 145 41.4
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 2.2e-15 86.3 145 41.4
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 2.2e-15 86.3 145 41.4
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 2.2e-15 86.3 145 41.4
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 2.2e-15 86.3 138 41.3
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.9e-15 85.9 51 78.4
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 2.9e-15 85.9 145 40.7
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.9e-15 85.9 138 42.0
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.9e-15 85.9 138 42.0
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 3.8e-15 85.5 144 39.6
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 3.8e-15 85.5 145 41.4
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 3.8e-15 85.5 138 42.0
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 3.8e-15 85.5 138 42.0
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 3.8e-15 85.5 146 42.5
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 4.9e-15 85.1 145 40.7
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.9e-15 85.1 59 66.1
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 4.9e-15 85.1 145 41.4
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 4.9e-15 85.1 51 78.4
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 6.4e-15 84.7 145 41.4
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.4e-15 84.7 145 40.7
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 6.4e-15 84.7 148 39.9
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 6.4e-15 84.7 51 76.5
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 6.4e-15 84.7 146 39.7
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 6.4e-15 84.7 145 40.7
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 6.4e-15 84.7 51 78.4
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 8.4e-15 84.3 145 40.7
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 8.4e-15 84.3 49 79.6
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 8.4e-15 84.3 145 39.3
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 1.4e-14 83.6 145 40.7
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.4e-14 83.6 145 38.6
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 1.4e-14 83.6 127 40.9
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 1.4e-14 83.6 146 39.7
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 1.4e-14 83.6 145 41.4
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 1.4e-14 83.6 147 38.8
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 1.4e-14 83.6 146 39.7
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 1.4e-14 83.6 51 78.4
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 2.4e-14 82.8 146 39.7
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 2.4e-14 82.8 152 38.8
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 2.4e-14 82.8 51 74.5
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 3.2e-14 82.4 145 40.0
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 3.2e-14 82.4 145 39.3
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 3.2e-14 82.4 150 39.3
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 3.2e-14 82.4 51 76.5
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 4.2e-14 82.0 145 39.3
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 4.2e-14 82.0 146 39.7
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 4.2e-14 82.0 146 39.0
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 5.4e-14 81.6 152 38.2
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 5.4e-14 81.6 146 39.0
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.4e-14 81.6 145 38.6
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 5.4e-14 81.6 146 39.7
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 7.1e-14 81.3 146 39.0
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 7.1e-14 81.3 138 38.4
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 7.1e-14 81.3 127 41.7
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 7.1e-14 81.3 145 39.3
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 7.1e-14 81.3 146 41.1
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 9.3e-14 80.9 145 37.9
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 9.3e-14 80.9 145 38.6
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 9.3e-14 80.9 145 38.6
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 9.3e-14 80.9 145 40.0
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 1.2e-13 80.5 145 38.6
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 1.6e-13 80.1 145 39.3
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 2.1e-13 79.7 146 39.0
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 2.7e-13 79.3 51 68.6
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.5e-13 79.0 145 37.9
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 3.5e-13 79.0 145 37.9
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 3.5e-13 79.0 147 39.5
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 3.5e-13 79.0 146 39.7
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 4.6e-13 78.6 145 39.3
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 6.0e-13 78.2 145 37.2
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 6.0e-13 78.2 145 37.2
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 6.0e-13 78.2 51 70.6
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 7.9e-13 77.8 138 37.7
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 7.9e-13 77.8 138 40.6
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 1.3e-12 77.0 138 37.7
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 1.3e-12 77.0 138 36.2
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 1.3e-12 77.0 138 39.1
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 1.3e-12 77.0 145 37.2
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 1.8e-12 76.6 138 37.7
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 1.8e-12 76.6 138 37.7
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.0
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.0
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.7
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.0
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.0
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.7
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.0
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.7
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.0
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 2.3e-12 76.3 138 37.0
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 3.0e-12 75.9 138 37.0
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 3.0e-12 75.9 145 37.2
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 6.7e-12 74.7 49 71.4
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 8.7e-12 74.3 49 67.3
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.1e-11 73.9 145 35.2
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 1.1e-11 73.9 51 64.7
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 1.5e-11 73.6 49 65.3
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 1.9e-11 73.2 49 65.3
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 1.9e-11 73.2 49 67.3
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 1.9e-11 73.2 49 69.4
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 4.3e-11 72.0 49 65.3
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 4.3e-11 72.0 145 32.4
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 4.3e-11 72.0 49 67.3
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 9.6e-11 70.9 49 67.3
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 9.6e-11 70.9 49 65.3
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.3e-10 70.5 145 35.9
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.3e-10 70.5 51 62.7
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.6e-10 70.1 145 34.5
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.6e-10 70.1 49 63.3
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.6e-10 70.1 49 63.3
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 2.1e-10 69.7 49 67.3
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 4.8e-10 68.6 49 59.2
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 1.1e-09 67.4 51 64.7
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 2.4e-09 66.2 49 61.2
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 6.9e-09 64.7 49 57.1
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 2.6e-08 62.8 40 77.5
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 5.8e-08 61.6 52 55.8
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 9.9e-08 60.8 52 55.8
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 1.3e-07 60.5 49 55.1
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 1.7e-07 60.1 52 53.8
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 6.4e-07 58.2 42 64.3
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 7.1e-06 54.7 49 49.0


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