Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 7.5e-98 360.5 184 100.0
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 9.0e-43 177.6 152 58.6
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 1.0e-41 174.1 169 52.7
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 1.3e-41 173.7 169 53.3
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 2.9e-41 172.6 170 53.5
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 6.5e-41 171.4 162 51.2
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 1.4e-40 170.2 173 52.6
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 1.4e-40 170.2 167 53.3
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.9e-40 169.9 166 50.6
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 2.5e-40 169.5 169 51.5
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 1.2e-39 167.2 174 51.1
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 6.0e-39 164.9 170 51.2
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 3.0e-38 162.5 152 57.2
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 5.7e-37 158.3 135 58.5
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 1.3e-36 157.1 162 53.1
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 4.8e-36 155.2 161 49.1
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 8.2e-36 154.5 135 57.0
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 1.8e-35 153.3 127 61.4
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 3.1e-35 152.5 152 52.6
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 5.3e-35 151.8 162 52.5
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 5.3e-35 151.8 166 51.2
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 2.0e-34 149.8 165 51.5
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 2.6e-34 149.4 113 65.5
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 2.6e-34 149.4 121 61.2
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 3.4e-34 149.1 160 51.9
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 4.5e-34 148.7 151 51.7
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 5.8e-34 148.3 177 50.8
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.0e-33 147.5 142 54.2
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 1.0e-33 147.5 128 55.5
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.3e-33 147.1 166 50.0
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 1.7e-33 146.7 161 51.6
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 1.7e-33 146.7 161 52.2
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 1.7e-33 146.7 149 53.0
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 2.2e-33 146.4 157 52.9
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 2.9e-33 146.0 165 49.1
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 5.0e-33 145.2 125 59.2
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 6.5e-33 144.8 134 53.0
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 6.5e-33 144.8 152 53.9
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 8.4e-33 144.4 151 50.3
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 1.1e-32 144.1 157 50.3
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.1e-32 144.1 161 50.3
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 1.1e-32 144.1 183 47.0
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.9e-32 143.3 110 63.6
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 3.2e-32 142.5 166 47.0
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 3.2e-32 142.5 128 56.2
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 3.2e-32 142.5 138 53.6
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 4.2e-32 142.1 169 48.5
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 5.5e-32 141.7 155 52.9
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 7.2e-32 141.4 123 56.9
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 7.2e-32 141.4 169 47.9
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 9.3e-32 141.0 153 52.9
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 9.3e-32 141.0 161 51.6
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 9.3e-32 141.0 151 49.7
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 9.3e-32 141.0 145 51.7
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 1.2e-31 140.6 161 50.9
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 3.5e-31 139.0 129 52.7
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 6.1e-31 138.3 103 61.2
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.8e-30 136.7 145 49.0
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 2.3e-30 136.3 158 46.2
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 3.0e-30 136.0 162 49.4
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 3.9e-30 135.6 141 51.1
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 5.1e-30 135.2 135 50.4
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 8.7e-30 134.4 153 48.4
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 8.7e-30 134.4 162 45.1
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 1.1e-29 134.0 163 44.8
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 1.1e-29 134.0 152 50.7
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 3.3e-29 132.5 131 50.4
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 3.3e-29 132.5 162 44.4
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 3.3e-29 132.5 162 44.4
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 3.3e-29 132.5 127 55.1
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 4.3e-29 132.1 131 50.4
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 4.3e-29 132.1 154 48.1
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 5.7e-29 131.7 98 61.2
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 9.7e-29 131.0 129 51.9
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 9.7e-29 131.0 90 68.9
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 1.3e-28 130.6 113 56.6
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 6.3e-28 128.3 142 49.3
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 1.1e-27 127.5 127 52.8
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 1.8e-27 126.7 128 51.6
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 3.1e-27 125.9 99 60.6
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.2e-26 124.0 95 63.2
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 2.6e-26 122.9 103 57.3
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 2.6e-26 122.9 109 56.0
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 5.9e-26 121.7 182 39.6
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.8e-25 119.0 91 61.5
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.8e-25 119.0 91 61.5
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 3.8e-25 119.0 183 39.9
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 1.1e-24 117.5 142 44.4
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 4.2e-24 115.5 156 46.2
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 5.5e-24 115.2 148 44.6
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.7e-23 112.8 102 55.9
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.0e-22 110.9 99 55.6
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.4e-22 110.5 98 54.1
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 5.1e-22 108.6 100 55.0
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.5e-21 106.3 167 40.1
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 2.2e-20 103.2 86 54.7
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 6.9e-19 98.2 107 46.7
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.0e-17 94.4 98 59.2
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 2.0e-10 70.1 122 36.1
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 7.2e-08 61.6 74 43.2
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 1.2e-07 60.8 124 35.5


User provided reference genes

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