Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0060300 Rhododendron simsii HOM05D003997 ORTHO05D002698 1.7e-109 399.4 212 100.0
Rhsim03G0060600 Rhododendron simsii HOM05D003997 ORTHO05D002698 1.3e-80 303.5 144 100.0
RhsimUnG0113000 Rhododendron simsii HOM05D003997 ORTHO05D002698 1.8e-34 150.2 151 58.9
Rhsim03G0061700 Rhododendron simsii HOM05D003997 ORTHO05D002698 4.0e-34 149.1 151 58.9
RhsimUnG0112900 Rhododendron simsii HOM05D003997 ORTHO05D002698 6.7e-34 148.3 224 44.2
Prupe.7G091500 Prunus persica HOM05D003997 ORTHO05D002698 1.3e-32 144.1 155 56.1
Actinidia37765 Actinidia chinensis HOM05D003997 ORTHO05D002698 3.7e-32 142.5 149 56.4
HanXRQChr17g0562561 Helianthus annuus HOM05D003997 ORTHO05D002698 3.7e-32 142.5 149 55.0
DCAR_013448 Daucus carota HOM05D003997 ORTHO05D002698 1.4e-31 140.6 151 56.3
SGA_v2.0_scaffold392G50675 Striga asiatica HOM05D003997 ORTHO05D002698 1.8e-31 140.2 149 55.7
Hma1.2p1_2082F.1_g313570 Hydrangea macrophylla HOM05D003997 ORTHO05D002698 4.1e-31 139.0 153 54.2
Peaxi162Scf00002g03712 Petunia axillaris HOM05D003997 ORTHO05D002698 4.1e-31 139.0 150 54.0
CiPaw.15G185300 Carya illinoinensis HOM05D003997 ORTHO05D002698 9.1e-31 137.9 146 56.2
FvH4_6g20730 Fragaria vesca HOM05D003997 ORTHO05D002698 1.6e-30 137.1 149 55.0
FAN02G0475 Fragaria x ananassa HOM05D003997 ORTHO05D002698 1.6e-30 137.1 149 55.0
FAN14G5955 Fragaria x ananassa HOM05D003997 ORTHO05D002698 1.6e-30 137.1 149 55.0
Nitab4.5_0000082g0420 Nicotiana tabacum HOM05D003997 ORTHO05D002698 1.6e-30 137.1 150 53.3
Nitab4.5_0009392g0020 Nicotiana tabacum HOM05D003997 ORTHO05D002698 1.6e-30 137.1 150 53.3
Nitab4.5_0014391g0010 Nicotiana tabacum HOM05D003997 ORTHO05D002698 1.6e-30 137.1 150 53.3
Nitab4.5_0021549g0010 Nicotiana tabacum HOM05D003997 ORTHO05D002698 1.6e-30 137.1 150 53.3
MSTRG.10419 Avicennia marina HOM05D003997 ORTHO05D002698 2.0e-30 136.7 145 56.6
CiPaw.08G072600 Carya illinoinensis HOM05D003997 ORTHO05D002698 2.0e-30 136.7 146 55.5
RcHm_v2.0_Chr3g0476631 Rosa chinensis HOM05D003997 ORTHO05D002698 2.0e-30 136.7 149 55.0
vmacro07504 Vaccinium macrocarpon HOM05D003997 ORTHO05D002698 2.0e-30 136.7 147 55.8
CANSAT35G1644 Cannabis sativa HOM05D003997 ORTHO05D002698 2.7e-30 136.3 145 55.9
Duzib128G1254 Durio zibethinus HOM05D003997 ORTHO05D002698 2.7e-30 136.3 148 54.1
FAN05G3201 Fragaria x ananassa HOM05D003997 ORTHO05D002698 2.7e-30 136.3 149 55.0
MD14G1042400 Malus domestica HOM05D003997 ORTHO05D002698 3.5e-30 136.0 155 51.6
Aqoxy1G01867 Aquilegia oxysepala HOM05D003997 ORTHO05D002698 4.5e-30 135.6 145 54.5
Nn2g14387 Nelumbo nucifera HOM05D003997 ORTHO05D002698 5.9e-30 135.2 150 52.7
Atru.chr8.1304 Acer truncatum HOM05D003997 ORTHO05D002698 7.7e-30 134.8 145 55.2
Lj3A736G17 Lonicera japonica HOM05D003997 ORTHO05D002698 7.7e-30 134.8 146 54.8
Solyc04g017680.3 Solanum lycopersicum HOM05D003997 ORTHO05D002698 7.7e-30 134.8 150 54.0
Sopen04g008760 Solanum pennellii HOM05D003997 ORTHO05D002698 7.7e-30 134.8 150 54.0
Thecc.05G108200 Theobroma cacao HOM05D003997 ORTHO05D002698 7.7e-30 134.8 148 54.7
Aa31LG11G1160 Aethionema arabicum HOM05D003997 ORTHO05D002698 1.0e-29 134.4 144 54.9
BcaC03g18154 Brassica carinata HOM05D003997 ORTHO05D002698 1.0e-29 134.4 149 52.3
BcaC03g18159 Brassica carinata HOM05D003997 ORTHO05D002698 1.0e-29 134.4 149 52.3
A02p42340 Brassica napus HOM05D003997 ORTHO05D002698 1.0e-29 134.4 149 52.3
C02p62220 Brassica napus HOM05D003997 ORTHO05D002698 1.0e-29 134.4 149 52.3
BraA02t09164Z Brassica rapa HOM05D003997 ORTHO05D002698 1.0e-29 134.4 149 52.3
Aqoxy4G00923 Aquilegia oxysepala HOM05D003997 ORTHO05D002698 1.3e-29 134.0 145 53.1
BcaB07g29840 Brassica carinata HOM05D003997 ORTHO05D002698 1.3e-29 134.0 149 52.3
CSS0008111 Camellia sinensis var. sinensis HOM05D003997 ORTHO05D002698 1.3e-29 134.0 148 54.1
CSS0023244 Camellia sinensis var. sinensis HOM05D003997 ORTHO05D002698 1.3e-29 134.0 148 54.1
MELO3C004760.2 Cucumis melo HOM05D003997 ORTHO05D002698 1.3e-29 134.0 145 55.2
Gohir.A09G132800 Gossypium hirsutum HOM05D003997 ORTHO05D002698 1.7e-29 133.7 148 53.4
Gohir.D01G190300 Gossypium hirsutum HOM05D003997 ORTHO05D002698 1.7e-29 133.7 145 53.8
Gorai.002G234000 Gossypium raimondii HOM05D003997 ORTHO05D002698 1.7e-29 133.7 145 53.8
RcHm_v2.0_Chr7g0223381 Rosa chinensis HOM05D003997 ORTHO05D002698 1.7e-29 133.7 149 53.7
Cpa.g.sc17.105 Carica papaya HOM05D003997 ORTHO05D002698 2.2e-29 133.3 146 53.4
Eucgr.H00426 Eucalyptus grandis HOM05D003997 ORTHO05D002698 2.2e-29 133.3 146 54.1
COL.COLO4_29520 Corchorus olitorius HOM05D003997 ORTHO05D002698 2.9e-29 132.9 146 53.4
Lsat_1_v5_gn_4_40160 Lactuca sativa HOM05D003997 ORTHO05D002698 2.9e-29 132.9 148 52.7
Manes.08G035900 Manihot esculenta HOM05D003997 ORTHO05D002698 2.9e-29 132.9 146 54.1
Sed0019356 Sechium edule HOM05D003997 ORTHO05D002698 2.9e-29 132.9 145 55.9
TWI53G0181 Tripterygium wilfordii HOM05D003997 ORTHO05D002698 2.9e-29 132.9 149 55.0
BcaB02g09651 Brassica carinata HOM05D003997 ORTHO05D002698 3.8e-29 132.5 149 52.3
BraA06t25868Z Brassica rapa HOM05D003997 ORTHO05D002698 3.8e-29 132.5 149 52.3
CsaV3_1G014590 Cucumis sativus L. HOM05D003997 ORTHO05D002698 3.8e-29 132.5 145 54.5
BolC2t12279H Brassica oleracea HOM05D003997 ORTHO05D002698 5.0e-29 132.1 149 51.7
Cfa020087 Carpinus fangiana HOM05D003997 ORTHO05D002698 5.0e-29 132.1 144 53.5
Dinv25067 Davidia involucrata HOM05D003997 ORTHO05D002698 5.0e-29 132.1 149 53.0
Thhalv10003962m.g Eutrema salsugineum HOM05D001982 ORTHO05D003938 5.0e-29 132.1 149 51.0
BcaC01g02477 Brassica carinata HOM05D003997 ORTHO05D002698 6.5e-29 131.7 149 51.7
C03p64380 Brassica napus HOM05D003997 ORTHO05D002698 6.5e-29 131.7 149 51.7
BolC3t18692H Brassica oleracea HOM05D003997 ORTHO05D002698 6.5e-29 131.7 149 51.7
SHI07013 Sapria himalayana HOM05D003997 ORTHO05D002698 6.5e-29 131.7 146 53.4
TAR623G1175 Trochodendron aralioides HOM05D003997 ORTHO05D002698 6.5e-29 131.7 147 53.1
Cc06_g06830 Coffea canephora HOM05D003997 ORTHO05D002698 8.5e-29 131.3 177 46.9
Gohir.A01G200200 Gossypium hirsutum HOM05D003997 ORTHO05D002698 8.5e-29 131.3 144 53.5
Sp2g25660 Schrenkiella parvula HOM05D003997 ORTHO05D002698 8.5e-29 131.3 149 52.3
ClCG01G012560 Citrullus lanatus HOM05D003997 ORTHO05D002698 1.1e-28 131.0 145 54.5
ECA234G3695 Erigeron canadensis HOM05D003997 ORTHO05D002698 1.1e-28 131.0 148 51.4
Migut.O00931 Erythranthe guttata HOM05D003997 ORTHO05D002698 1.9e-28 130.2 145 54.5
Potri.016G067100 Populus trichocarpa HOM05D003997 ORTHO05D002698 1.9e-28 130.2 142 55.6
Carub.0001s4137 Capsella rubella HOM05D003997 ORTHO05D002698 2.5e-28 129.8 149 50.3
Carub.0007s1240 Capsella rubella HOM05D003997 ORTHO05D002698 2.5e-28 129.8 149 50.3
Migut.L01852 Erythranthe guttata HOM05D003997 ORTHO05D002698 2.5e-28 129.8 145 54.5
Hund20962 Selenicereus undatus HOM05D003997 ORTHO05D002698 3.2e-28 129.4 149 51.0
PSO675G1782 Papaver somniferum HOM05D003997 ORTHO05D002698 4.2e-28 129.0 144 53.5
PSO732G0769 Papaver somniferum HOM05D003997 ORTHO05D002698 4.2e-28 129.0 144 53.5
QL07p027111 Quercus lobata HOM05D003997 ORTHO05D002698 4.2e-28 129.0 145 53.8
Ah.15g098860 Amaranthus hybridus HOM05D003997 ORTHO05D002698 5.5e-28 128.6 148 51.4
Ciclev10013709m.g Citrus clementina HOM05D003997 ORTHO05D002698 5.5e-28 128.6 147 50.3
AT1G52370 Arabidopsis thaliana HOM05D003997 ORTHO05D002698 7.2e-28 128.3 149 49.7
AT4G28360 Arabidopsis thaliana HOM05D003997 ORTHO05D002698 7.2e-28 128.3 149 49.7
Sabra16G0068400 Salix brachista HOM05D003997 ORTHO05D002698 7.2e-28 128.3 142 54.9
THA.LOC109116862 Tarenaya hassleriana HOM05D003997 ORTHO05D002698 7.2e-28 128.3 143 52.4
Sc06g0010610 Simmondsia chinensis HOM05D003997 ORTHO05D002698 1.2e-27 127.5 155 50.3
TWI74G0953 Tripterygium wilfordii HOM05D003997 ORTHO05D002698 1.2e-27 127.5 149 52.3
unitig_8.g3554 Utricularia gibba HOM05D003997 ORTHO05D002698 1.2e-27 127.5 147 51.7
AL1G60620 Arabidopsis lyrata HOM05D003997 ORTHO05D002698 1.6e-27 127.1 144 50.7
QL03p055008 Quercus lobata HOM05D003997 ORTHO05D002698 1.6e-27 127.1 144 53.5
SalBow5G1795 Salvia bowleyana HOM05D003997 ORTHO05D002698 1.6e-27 127.1 146 51.4
Oeu020171.1 Olea europaea HOM05D003997 ORTHO05D002698 2.1e-27 126.7 145 51.7
EL10Ac7g16269 Beta vulgaris HOM05D003997 ORTHO05D002698 3.6e-27 125.9 148 49.3
MBI19_g30302_MAGBIO Magnolia biondii HOM05D003997 ORTHO05D002698 4.7e-27 125.6 134 56.0
AUR62015091 Chenopodium quinoa HOM05D003997 ORTHO05D002698 6.1e-27 125.2 145 50.3
AUR62017549 Chenopodium quinoa HOM05D003997 ORTHO05D002698 6.1e-27 125.2 145 50.3
Rhsim03G0061600 Rhododendron simsii HOM05D003997 ORTHO05D002698 1.4e-26 124.0 110 61.8
VMungo1383G3620 Vigna mungo HOM05D003997 ORTHO05D002698 5.2e-26 122.1 146 47.9
GSVIVG01022501001 Vitis vinifera HOM05D003997 ORTHO05D002698 5.2e-26 122.1 142 51.4
Phvul.008G070600 Phaseolus vulgaris HOM05D003997 ORTHO05D002698 6.8e-26 121.7 146 48.6
ATR0730G052 Amborella trichopoda HOM05D003997 ORTHO05D002698 8.8e-26 121.3 145 50.3
Lj2g0021502 Lotus japonicus HOM05D003997 ORTHO05D002698 8.8e-26 121.3 147 49.7
Ca_12342_v3 Cicer arietinum L. HOM05D003997 ORTHO05D002698 3.4e-25 119.4 156 44.9
Phvul.008G070900 Phaseolus vulgaris HOM05D003997 ORTHO05D002698 7.5e-25 118.2 149 49.0
HPP92_017694 Vanilla planifolia HOM05D003997 ORTHO05D002698 1.7e-24 117.1 138 49.3
CARHR236070 Cardamine hirsuta HOM05D003997 ORTHO05D002698 2.2e-24 116.7 149 49.7
Glyma.18G227500 Glycine max HOM05D003997 ORTHO05D002698 2.2e-24 116.7 146 46.6
Psat6g101760 Pisum sativum HOM05D003997 ORTHO05D002698 2.8e-24 116.3 147 46.9
Medtr1g040020 Medicago truncatula HOM05D003997 ORTHO05D002698 6.3e-24 115.2 157 44.6
Zm00001eb095190 Zea mays HOM05D003997 ORTHO05D002698 1.1e-23 114.4 148 45.9
RhsimUnG0113200 Rhododendron simsii HOM05D003997 ORTHO05D002698 3.1e-23 112.8 109 56.9
SEGI_26891 Sequoiadendron giganteum HOM05D003997 ORTHO05D002698 4.1e-23 112.5 148 46.6
TPR.G30221 Trifolium pratense HOM05D003997 ORTHO05D002698 4.1e-23 112.5 144 47.2
Os01g0616500 Oryza sativa ssp. japonica HOM05D003997 ORTHO05D002698 1.6e-22 110.5 138 45.7
Glyma.09G264400 Glycine max HOM05D003997 ORTHO05D002698 2.0e-22 110.2 146 44.5
MD12G1043300 Malus domestica HOM05D003997 ORTHO05D002698 5.9e-22 108.6 107 54.2
Lalb_Chr16g0386841 Lupinus albus HOM05D003997 ORTHO05D002698 7.7e-22 108.2 155 41.3
Lalb_Chr05g0221411 Lupinus albus HOM05D003997 ORTHO05D002698 1.0e-21 107.8 157 39.5
PGR142G0313 Punica granatum HOM05D003997 ORTHO05D002698 1.7e-21 107.1 105 56.2
Haze_20104 Corylus avellana HOM05D003997 ORTHO05D002698 5.0e-21 105.5 104 53.8
arahy.Tifrunner.gnm1.ann1.RXW997 Arachis hypogaea HOM05D003997 ORTHO05D002698 6.5e-21 105.1 147 43.5
arahy.Tifrunner.gnm1.ann1.2ECS7R Arachis hypogaea HOM05D003997 ORTHO05D002698 1.5e-20 104.0 147 42.9
arahy.Tifrunner.gnm1.ann1.4C6UH4 Arachis hypogaea HOM05D003997 ORTHO05D002698 1.5e-20 104.0 147 42.9
arahy.Tifrunner.gnm1.ann1.7B1PRD Arachis hypogaea HOM05D003997 ORTHO05D002698 1.5e-20 104.0 147 42.9
arahy.Tifrunner.gnm1.ann1.RN4U32 Arachis hypogaea HOM05D003997 ORTHO05D002698 1.5e-20 104.0 147 42.9
arahy.Tifrunner.gnm1.ann1.W16VAI Arachis hypogaea HOM05D003997 ORTHO05D002698 1.5e-20 104.0 147 42.9
arahy.Tifrunner.gnm1.ann1.ZAYD4R Arachis hypogaea HOM05D003997 ORTHO05D002698 1.5e-20 104.0 147 42.9
arahy.Tifrunner.gnm1.ann1.4LVT1K Arachis hypogaea HOM05D003997 ORTHO05D002698 2.5e-20 103.2 147 42.9
CDE02G4432 Ceratophyllum demersum HOM05D003997 ORTHO05D002698 6.1e-19 98.6 120 51.7
PGSC0003DMG400034098 Solanum tuberosum HOM05D003997 ORTHO05D002698 1.8e-18 97.1 161 42.9
Phvul.008G071600 Phaseolus vulgaris HOM05D003997 ORTHO05D002698 6.8e-18 95.1 137 46.0
CAN.G1237.44 Capsicum annuum HOM05D003997 ORTHO05D002698 2.0e-17 93.6 199 39.7
MD03G1130200 Malus domestica HOM05D003997 ORTHO05D002698 2.6e-17 93.2 157 42.7
Rhsim03G0061200 Rhododendron simsii HOM05D003997 ORTHO05D002698 5.7e-17 92.0 115 51.3
CARHR060900 Cardamine hirsuta HOM05D003997 ORTHO05D002698 7.5e-17 91.7 146 41.1
MD06G1011100 Malus domestica HOM05D003997 ORTHO05D002698 7.5e-17 91.7 157 41.4
Gorai.006G147800 Gossypium raimondii HOM05D003997 ORTHO05D002698 2.8e-16 89.7 80 60.0
Prupe.7G027600 Prunus persica HOM05D003997 ORTHO05D002698 7.0e-15 85.1 152 40.8
AagrBONN_evm.TU.Sc2ySwM_228.3244 Anthoceros agrestis HOM05D003997 ORTHO05D002698 1.1e-12 77.8 131 36.6
Pp3c8_16210 Physcomitrium patens HOM05D003997 ORTHO05D002698 4.3e-12 75.9 138 32.6
RcHm_v2.0_Chr4g0386011 Rosa chinensis HOM05D003997 ORTHO05D002698 5.6e-12 75.5 152 38.2
MD12G1043400 Malus domestica HOM05D003997 ORTHO05D002698 8.0e-11 71.6 63 63.5
Mapoly0001s0445 Marchantia polymorpha HOM05D003997 ORTHO05D002698 2.3e-10 70.1 133 33.8
FvH4_4g00560 Fragaria vesca HOM05D003997 ORTHO05D002698 5.2e-10 68.9 141 36.9
FAN12G0168 Fragaria x ananassa HOM05D003997 ORTHO05D002698 5.2e-10 68.9 141 36.9
SMO228G0153 Selaginella moellendorffii HOM05D003997 ORTHO05D002698 6.8e-10 68.6 133 33.8
Nitab4.5_0007356g0020 Nicotiana tabacum HOM05D003997 ORTHO05D002698 8.9e-10 68.2 87 44.8
FAN12G3167 Fragaria x ananassa HOM05D003997 ORTHO05D002698 1.5e-09 67.4 138 37.7
Solyc03g044440.2 Solanum lycopersicum HOM05D003997 ORTHO05D002698 9.8e-09 64.7 138 36.2
Phvul.010G107200 Phaseolus vulgaris HOM05D003997 ORTHO05D002698 2.9e-08 63.2 60 56.7
Sopen03g008580 Solanum pennellii HOM05D003997 ORTHO05D002698 8.3e-08 61.6 84 45.2
Rhsim03G0059800 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.4e-07 60.8 53 52.8
Psat6g152720 Pisum sativum HOM05D003997 ORTHO05D002698 3.2e-07 59.7 86 41.9
MCO07G289 Micromonas commoda HOM05D003997 ORTHO05D002698 7.0e-07 58.5 75 42.7
Rhsim03G0061100 Rhododendron simsii HOM05D000448 ORTHO05D000291 9.2e-07 58.2 86 37.2
BolSC101t60211H Brassica oleracea HOM05D003997 ORTHO05D002698 2.7e-06 56.6 53 58.5


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