Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0094900 Rhododendron simsii HOM05D020172 ORTHO05D018188 5.9e-42 173.7 83 100.0
Rhsim02G0155800 Rhododendron simsii HOM05D020172 ORTHO05D018188 5.9e-42 173.7 83 100.0
Rhsim13G0156900 Rhododendron simsii HOM05D020172 ORTHO05D018188 1.8e-38 162.2 83 91.6
Rhsim02G0112200 Rhododendron simsii HOM05D020172 ORTHO05D018188 1.8e-30 135.6 113 66.4
CAN.G1003.15 Capsicum annuum HOM05D007172 ORTHO05D009267 2.5e-16 88.6 68 63.2
Actinidia05344 Actinidia chinensis HOM05D007172 ORTHO05D018188 4.2e-16 87.8 72 61.1
Rhsim01G0140000 Rhododendron simsii HOM05D020172 ORTHO05D018188 6.1e-15 84.0 43 93.0
PSO384G3372 Papaver somniferum HOM05D007172 ORTHO05D009267 3.7e-12 74.7 45 68.9
PSO339G1228 Papaver somniferum HOM05D007172 ORTHO05D009267 8.3e-12 73.6 45 66.7
Peaxi162Scf00141g00076 Petunia axillaris HOM05D020172 ORTHO05D018188 3.8e-09 64.7 41 63.4
Cc06_g01640 Coffea canephora HOM05D007172 ORTHO05D009267 1.5e-08 62.8 42 59.5
Duzib106G0549 Durio zibethinus HOM05D007172 ORTHO05D018188 4.2e-08 61.2 57 45.6
SEGI_16355 Sequoiadendron giganteum HOM05D004271 ORTHO05D006011 7.2e-08 60.5 65 46.2
EL10Ac7g17347 Beta vulgaris HOM05D000855 ORTHO05D008530 1.6e-07 59.3 68 45.6
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 1.6e-07 59.3 68 48.5
AUR62040505 Chenopodium quinoa HOM05D000855 ORTHO05D008530 2.7e-07 58.5 68 45.6
Psat6g067680 Pisum sativum HOM05D000855 ORTHO05D008530 2.7e-07 58.5 72 45.8
Lalb_Chr02g0153641 Lupinus albus HOM05D000855 ORTHO05D008530 3.6e-07 58.2 68 45.6
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 3.6e-07 58.2 68 45.6
CARHR084060 Cardamine hirsuta HOM05D000855 ORTHO05D008530 1.4e-06 56.2 68 45.6
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 1.8e-06 55.8 68 45.6
AUR62042604 Chenopodium quinoa HOM05D000855 ORTHO05D008530 1.8e-06 55.8 68 44.1
DCAR_003849 Daucus carota HOM05D000855 ORTHO05D008530 1.8e-06 55.8 69 44.9
DCAR_009287 Daucus carota HOM05D000855 ORTHO05D008530 1.8e-06 55.8 69 44.9
AT3G09650 Arabidopsis thaliana HOM05D000855 ORTHO05D008530 2.3e-06 55.5 68 45.6
Ca_11448_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008530 2.3e-06 55.5 68 44.1
Lj5g0021887 Lotus japonicus HOM05D000855 ORTHO05D008530 2.3e-06 55.5 68 45.6
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 3.0e-06 55.1 68 42.6
Phvul.007G163500 Phaseolus vulgaris HOM05D000855 ORTHO05D008530 3.0e-06 55.1 68 44.1
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 4.0e-06 54.7 68 44.1
SalBow3G1200 Salvia bowleyana HOM05D000855 ORTHO05D008530 4.0e-06 54.7 68 39.7
SalBow3G1712 Salvia bowleyana HOM05D000855 ORTHO05D008530 4.0e-06 54.7 68 39.7
Aqoxy4G03187 Aquilegia oxysepala HOM05D000855 ORTHO05D008530 5.2e-06 54.3 68 41.2
FAN02G3427 Fragaria x ananassa HOM05D000855 ORTHO05D008530 5.2e-06 54.3 68 41.2
Hma1.2p1_0111F.1_g053850 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 5.2e-06 54.3 68 42.6
Hma1.2p1_0111F.1_g053860 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 5.2e-06 54.3 68 42.6
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 5.2e-06 54.3 68 41.2
Actinidia04698 Actinidia chinensis HOM05D000855 ORTHO05D008530 6.8e-06 53.9 68 42.6
QL07p045308 Quercus lobata HOM05D000855 ORTHO05D008530 6.8e-06 53.9 68 44.1
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 6.8e-06 53.9 68 42.6
CiPaw.02G077000 Carya illinoinensis HOM05D000855 ORTHO05D008530 8.8e-06 53.5 68 41.2
Manes.08G003100 Manihot esculenta HOM05D000855 ORTHO05D008530 8.8e-06 53.5 68 42.6
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 8.8e-06 53.5 68 44.1


User provided reference genes

Program Settings