Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0052300 Rhododendron simsii HOM05D000299 ORTHO05D000079 5.6e-108 394.4 219 100.0
Actinidia25087 Actinidia chinensis HOM05D000299 ORTHO05D000079 1.2e-20 104.4 103 59.2
vmacro23457 Vaccinium macrocarpon HOM05D000299 ORTHO05D000079 2.9e-16 89.7 103 50.5
CSS0006935 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 5.0e-16 89.0 104 54.8
CSS0049672 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 5.0e-16 89.0 104 54.8
Actinidia35941 Actinidia chinensis HOM05D000299 ORTHO05D000079 9.5e-15 84.7 103 52.4
Rhsim09G0047900 Rhododendron simsii HOM05D000299 ORTHO05D000079 8.0e-14 81.6 106 50.9
Lsat_1_v5_gn_2_42120 Lactuca sativa HOM05D000299 ORTHO05D000079 2.3e-13 80.1 73 58.9
Actinidia28395 Actinidia chinensis HOM05D000299 ORTHO05D000079 1.2e-12 77.8 98 51.0
Hma1.2p1_0903F.1_g235050 Hydrangea macrophylla HOM05D000299 ORTHO05D000079 1.2e-12 77.8 97 49.5
Actinidia39948 Actinidia chinensis HOM05D000299 ORTHO05D000079 2.6e-12 76.6 79 54.4
Potri.001G053500 Populus trichocarpa HOM05D000299 ORTHO05D000079 3.4e-12 76.3 105 47.6
Sabra03G0128200 Salix brachista HOM05D000299 ORTHO05D000079 4.4e-12 75.9 108 46.3
Sabra01G0037700 Salix brachista HOM05D000299 ORTHO05D000079 1.7e-11 73.9 110 48.2
CSS0045839 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 2.8e-11 73.2 106 44.3
Cc03_g07150 Coffea canephora HOM05D000299 ORTHO05D000079 8.3e-11 71.6 101 53.5
SalBow2G0679 Salvia bowleyana HOM05D000299 ORTHO05D000079 1.1e-10 71.2 102 50.0
Potri.003G174800 Populus trichocarpa HOM05D000299 ORTHO05D000079 1.4e-10 70.9 107 47.7
TWI53G1656 Tripterygium wilfordii HOM05D000299 ORTHO05D000079 3.1e-10 69.7 119 43.7
CiPaw.01G205200 Carya illinoinensis HOM05D000299 ORTHO05D000079 5.4e-10 68.9 106 48.1
SGA_v2.0_scaffold31G12603 Striga asiatica HOM05D000299 ORTHO05D000079 5.4e-10 68.9 105 46.7
MSTRG.4203 Avicennia marina HOM05D000299 ORTHO05D000079 7.0e-10 68.6 99 49.5
TAR365G0144 Trochodendron aralioides HOM05D000299 ORTHO05D000079 2.0e-09 67.0 118 39.8
TWI73G0918 Tripterygium wilfordii HOM05D000299 ORTHO05D000079 2.7e-09 66.6 108 45.4
MSTRG.21939 Avicennia marina HOM05D000299 ORTHO05D000079 7.8e-09 65.1 110 45.5
Migut.N00329 Erythranthe guttata HOM05D000299 ORTHO05D000079 1.0e-08 64.7 48 66.7
vmacro22825 Vaccinium macrocarpon HOM05D000299 ORTHO05D000079 1.3e-08 64.3 111 40.5
Manes.15G049400 Manihot esculenta HOM05D000299 ORTHO05D000079 2.3e-08 63.5 105 41.9
Oeu048400.1 Olea europaea HOM05D000299 ORTHO05D000079 2.3e-08 63.5 111 43.2
Lsat_1_v5_gn_6_62960 Lactuca sativa HOM05D000299 ORTHO05D000079 2.9e-08 63.2 111 41.4
Nitab4.5_0003083g0010 Nicotiana tabacum HOM05D000299 ORTHO05D000079 3.8e-08 62.8 111 45.0
QL06p022927 Quercus lobata HOM05D000299 ORTHO05D000079 6.6e-08 62.0 106 40.6
Medtr1g046680 Medicago truncatula HOM05D000299 ORTHO05D000079 8.6e-08 61.6 79 54.4
TPR.G11282 Trifolium pratense HOM05D000299 ORTHO05D000079 1.1e-07 61.2 81 54.3
MSTRG.24640 Avicennia marina HOM05D000299 ORTHO05D000079 1.5e-07 60.8 55 58.2
Dinv38288 Davidia involucrata HOM05D000299 ORTHO05D000079 1.5e-07 60.8 47 63.8
Haze_11545 Corylus avellana HOM05D000299 ORTHO05D000079 3.3e-07 59.7 119 35.3
CsaV3_2G012140 Cucumis sativus L. HOM05D000299 ORTHO05D000079 3.3e-07 59.7 102 38.2
Migut.G00615 Erythranthe guttata HOM05D000299 ORTHO05D000079 3.3e-07 59.7 69 46.4
Lj6g0010883 Lotus japonicus HOM05D000299 ORTHO05D000079 3.3e-07 59.7 99 45.5
Solyc09g091250.4 Solanum lycopersicum HOM05D000299 ORTHO05D000079 3.3e-07 59.7 104 45.2
Sopen09g034220 Solanum pennellii HOM05D000299 ORTHO05D000079 3.3e-07 59.7 104 45.2
PGSC0003DMG400011579 Solanum tuberosum HOM05D000299 ORTHO05D000079 3.3e-07 59.7 104 45.2
Lalb_Chr03g0036751 Lupinus albus HOM05D000299 ORTHO05D000079 5.6e-07 58.9 101 42.6
Lalb_Chr19g0128731 Lupinus albus HOM05D000299 ORTHO05D000079 5.6e-07 58.9 76 50.0
Ca_11823_v3 Cicer arietinum L. HOM05D000299 ORTHO05D000079 9.5e-07 58.2 73 49.3
Duzib212G0584 Durio zibethinus HOM05D000299 ORTHO05D000079 9.5e-07 58.2 99 46.5
Psat6g047280 Pisum sativum HOM05D000299 ORTHO05D000079 9.5e-07 58.2 73 47.9
ClCG06G007510 Citrullus lanatus HOM05D000299 ORTHO05D000079 2.8e-06 56.6 102 39.2
Nitab4.5_0002182g0080 Nicotiana tabacum HOM05D000299 ORTHO05D000079 2.8e-06 56.6 108 44.4
CAN.G305.19 Capsicum annuum HOM05D000299 ORTHO05D000079 3.6e-06 56.2 108 39.8
MELO3C023076.2 Cucumis melo HOM05D000299 ORTHO05D000079 3.6e-06 56.2 103 37.9
Glyma.10G126900 Glycine max HOM05D000299 ORTHO05D000079 4.7e-06 55.8 101 43.6
Phvul.007G227300 Phaseolus vulgaris HOM05D000299 ORTHO05D000079 6.1e-06 55.5 76 50.0
SalBow3G4448 Salvia bowleyana HOM05D000299 ORTHO05D000079 6.1e-06 55.5 44 61.4


User provided reference genes

Program Settings