Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 1.3e-199 699.5 357 100.0
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 3.8e-130 468.8 351 71.2
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.4e-129 466.8 351 70.4
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.0e-127 460.7 281 84.0
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 5.5e-121 438.3 341 69.2
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 2.6e-118 429.5 345 68.1
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 9.7e-118 427.6 345 67.8
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 6.3e-117 424.9 347 66.6
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 6.3e-117 424.9 345 67.5
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 5.3e-116 421.8 241 85.1
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 6.9e-116 421.4 342 67.3
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 1.2e-115 420.6 351 66.1
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 3.4e-115 419.1 349 65.9
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.0e-114 417.5 348 67.8
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 2.2e-114 416.4 349 65.3
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 3.8e-114 415.6 354 64.1
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 3.8e-114 415.6 243 84.0
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.4e-113 413.7 348 65.8
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 1.9e-113 413.3 357 62.7
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 5.5e-113 411.8 345 65.2
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 7.2e-113 411.4 347 65.7
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 7.2e-113 411.4 350 65.7
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 1.2e-112 410.6 251 80.9
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 4.7e-112 408.7 349 64.2
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 4.7e-112 408.7 311 67.2
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 4.7e-112 408.7 246 82.5
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 6.1e-112 408.3 243 83.5
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 7.9e-112 407.9 247 81.8
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 7.9e-112 407.9 248 81.0
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 1.0e-111 407.5 243 81.9
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 1.0e-111 407.5 242 83.1
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 1.8e-111 406.8 248 81.9
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 2.3e-111 406.4 343 62.4
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 3.0e-111 406.0 242 82.2
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 3.0e-111 406.0 243 83.1
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 3.9e-111 405.6 243 84.0
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 3.9e-111 405.6 242 84.7
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 5.2e-111 405.2 347 64.0
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 8.8e-111 404.4 341 64.5
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 8.8e-111 404.4 330 66.4
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 1.1e-110 404.1 245 82.0
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 1.5e-110 403.7 249 80.3
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.5e-110 403.7 344 64.0
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 2.0e-110 403.3 249 80.3
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 2.0e-110 403.3 248 79.8
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 2.6e-110 402.9 245 82.0
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 7.4e-110 401.4 244 79.1
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 9.7e-110 401.0 249 79.5
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.7e-109 400.2 244 82.4
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.2e-109 399.8 248 79.4
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 2.2e-109 399.8 264 75.8
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.8e-109 399.4 241 83.8
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 4.8e-109 398.7 242 81.8
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 1.1e-108 397.5 244 77.5
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 1.4e-108 397.1 244 81.6
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.4e-108 397.1 244 81.6
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.8e-108 396.7 244 79.5
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 4.1e-108 395.6 259 77.2
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 9.1e-108 394.4 343 62.7
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 1.2e-107 394.0 258 76.4
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 1.6e-107 393.7 249 79.5
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 2.6e-107 392.9 352 64.2
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 3.5e-107 392.5 240 80.0
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 4.5e-107 392.1 248 79.8
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 1.3e-106 390.6 252 76.6
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 2.5e-105 386.3 343 63.3
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 4.2e-105 385.6 240 78.8
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 8.8e-103 377.9 249 73.1
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 2.8e-101 372.9 240 77.1
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 3.7e-101 372.5 240 74.6
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 6.3e-101 371.7 240 77.1
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 3.1e-100 369.4 240 76.2
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 4.1e-100 369.0 341 58.7
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.6e-99 367.1 341 58.9
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 2.0e-99 366.7 240 76.2
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 2.0e-99 366.7 240 76.2
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 3.5e-99 365.9 240 75.4
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 3.5e-99 365.9 248 77.0
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 4.5e-99 365.5 226 80.5
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 1.0e-98 364.4 242 76.0
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 2.2e-98 363.2 352 59.7
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 2.9e-98 362.8 240 75.0
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 5.0e-98 362.1 350 57.1
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 6.5e-98 361.7 240 74.6
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 6.5e-98 361.7 341 58.4
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 6.5e-98 361.7 240 74.6
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 8.5e-98 361.3 228 79.8
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 1.5e-97 360.5 341 57.8
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 7.2e-97 358.2 241 74.7
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 1.2e-96 357.5 241 74.7
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 6.1e-96 355.1 249 76.3
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 4.0e-95 352.4 249 69.5
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.7e-93 347.1 216 80.6
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 6.3e-93 345.1 247 67.6
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 1.2e-91 340.9 206 83.5
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 1.6e-91 340.5 295 65.4
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 2.1e-88 330.1 240 70.8
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 3.0e-87 326.2 292 64.0
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 5.2e-87 325.5 375 53.3
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 5.7e-86 322.0 293 63.1
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 7.5e-86 321.6 202 79.7
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 1.2e-83 314.3 237 67.9
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 1.7e-82 310.5 187 83.4
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 6.6e-82 308.5 251 61.4
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.8e-79 300.4 217 72.4
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 5.2e-79 298.9 242 61.6
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 3.7e-77 292.7 179 82.1
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 4.1e-76 289.3 241 63.1
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 1.1e-73 281.2 189 77.2
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.1e-71 273.1 222 67.6
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 2.4e-68 263.5 240 57.9
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 2.1e-64 250.4 244 56.6
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 2.6e-54 216.9 136 80.9
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 9.9e-54 214.9 289 45.0
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 5.8e-46 189.1 116 76.7
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 5.8e-38 162.5 115 66.1
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 2.9e-37 160.2 112 69.6
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 1.5e-33 147.9 95 72.6
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 9.6e-33 145.2 88 78.4
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.2e-29 134.0 95 73.7
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 5.6e-25 119.4 89 65.2
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 1.6e-11 74.7 64 62.5
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 3.6e-11 73.6 44 79.5
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 9.7e-09 65.5 48 62.5


User provided reference genes

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