Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0219500 Rhododendron simsii HOM05D001788 ORTHO05D003523 9.4e-49 196.4 92 100.0
Rhsim01G0219400 Rhododendron simsii HOM05D001788 ORTHO05D003523 5.5e-33 144.1 69 97.1
Rhsim01G0219600 Rhododendron simsii HOM05D001788 ORTHO05D003523 2.0e-30 135.6 70 92.9
Rhsim01G0219900 Rhododendron simsii HOM05D001788 ORTHO05D003523 2.0e-30 135.6 69 91.3
Rhsim01G0219300 Rhododendron simsii HOM05D001788 ORTHO05D003523 2.0e-27 125.6 72 86.1
Rhsim01G0219800 Rhododendron simsii HOM05D001788 ORTHO05D003523 1.0e-26 123.2 69 82.6
vmacro14457 Vaccinium macrocarpon HOM05D001788 ORTHO05D003523 1.7e-18 95.9 69 68.1
Rhsim01G0219700 Rhododendron simsii HOM05D001788 ORTHO05D003523 3.2e-17 91.7 42 100.0
Rhsim09G0035400 Rhododendron simsii HOM05D001788 ORTHO05D003523 1.6e-16 89.4 69 69.6
vmacro14459 Vaccinium macrocarpon HOM05D001788 ORTHO05D003523 3.6e-16 88.2 69 68.1
vmacro14460 Vaccinium macrocarpon HOM05D001788 ORTHO05D003523 3.6e-16 88.2 49 83.7
vmacro14461 Vaccinium macrocarpon HOM05D001788 ORTHO05D003523 6.1e-16 87.4 53 81.1
Rhsim09G0035300 Rhododendron simsii HOM05D001788 ORTHO05D003523 8.0e-16 87.0 69 66.7
vmacro14458 Vaccinium macrocarpon HOM05D001788 ORTHO05D003523 8.0e-16 87.0 49 83.7
Rhsim09G0035200 Rhododendron simsii HOM05D001788 ORTHO05D003523 3.0e-15 85.1 69 65.2
Dinv32785 Davidia involucrata HOM05D001788 ORTHO05D003523 3.7e-13 78.2 73 58.9
Dinv32786 Davidia involucrata HOM05D001788 ORTHO05D003523 2.4e-12 75.5 73 57.5
Rhsim01G0220000 Rhododendron simsii HOM05D001788 ORTHO05D003523 4.1e-12 74.7 69 60.9
Actinidia07116 Actinidia chinensis HOM05D001788 ORTHO05D003523 1.2e-08 63.2 69 49.3
Actinidia24080 Actinidia chinensis HOM05D001788 ORTHO05D003523 2.8e-08 62.0 70 52.9
Hma1.2p1_0071F.1_g038040 Hydrangea macrophylla HOM05D001788 ORTHO05D003523 4.7e-08 61.2 71 47.9
CSS0016309 Camellia sinensis var. sinensis HOM05D001788 ORTHO05D003523 1.0e-07 60.1 81 45.7
Migut.N02619 Erythranthe guttata HOM05D001788 ORTHO05D003523 2.3e-07 58.9 68 50.0
MSTRG.18636 Avicennia marina HOM05D001788 ORTHO05D003523 8.9e-07 57.0 62 46.8
TWI31G0073 Tripterygium wilfordii HOM05D001788 ORTHO05D003523 8.9e-07 57.0 60 55.0
Dinv04503 Davidia involucrata HOM05D001788 ORTHO05D003523 1.5e-06 56.2 80 42.5
Lsat_1_v5_gn_6_47021 Lactuca sativa HOM05D001788 ORTHO05D003523 1.5e-06 56.2 55 52.7
Medtr2g093350 Medicago truncatula HOM05D001788 ORTHO05D003523 3.4e-06 55.1 69 40.6
Manes.11G141600 Manihot esculenta HOM05D001788 ORTHO05D003523 4.4e-06 54.7 55 52.7
PGR119G1372 Punica granatum HOM05D001788 ORTHO05D003523 4.4e-06 54.7 54 53.7
Oeu036289.1 Olea europaea HOM05D001788 ORTHO05D003523 7.5e-06 53.9 77 45.5
vmacro03174 Vaccinium macrocarpon HOM05D001788 ORTHO05D003523 7.5e-06 53.9 109 37.6


User provided reference genes

Program Settings