Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0159600 Rhododendron simsii HOM05D011344 ORTHO05D016379 3.0e-182 641.7 328 100.0
Rhsim02G0161600 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.4e-99 367.1 304 69.4
Rhsim05G0160000 Rhododendron simsii HOM05D011344 ORTHO05D016379 5.6e-88 328.6 353 55.0
Rhsim11G0015600 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.5e-85 320.5 351 54.4
Rhsim01G0153500 Rhododendron simsii HOM05D011344 ORTHO05D016379 2.2e-76 290.0 332 55.7
RhsimUnG0074900 Rhododendron simsii HOM05D011344 ORTHO05D016379 4.1e-62 242.7 333 47.4
Rhsim02G0127200 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.2e-42 177.9 274 42.0
Rhsim01G0154300 Rhododendron simsii HOM05D011344 ORTHO05D016379 4.0e-41 172.9 276 43.1
vmacro09225 Vaccinium macrocarpon HOM05D007651 ORTHO05D000898 7.7e-37 158.7 332 32.8
Rhsim02G0142200 Rhododendron simsii HOM05D007651 ORTHO05D000898 4.5e-29 132.9 251 34.7
CSS0032349 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 8.5e-28 128.6 199 39.2
Rhsim04G0115000 Rhododendron simsii HOM05D007651 ORTHO05D000898 4.2e-27 126.3 264 32.6
Rhsim02G0102000 Rhododendron simsii HOM05D002347 ORTHO05D000898 1.6e-26 124.4 192 38.0
Rhsim09G0109800 Rhododendron simsii HOM05D007651 ORTHO05D000898 3.6e-26 123.2 192 37.5
CSS0035836 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 3.0e-25 120.2 198 38.4
RhsimUnG0167100 Rhododendron simsii HOM05D011344 ORTHO05D016379 6.8e-25 119.0 169 46.2
CSS0002149 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 1.2e-24 118.2 217 34.6
Hma1.2p1_0381F.1_g139960 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 4.3e-19 99.8 228 30.7
Rhsim04G0060600 Rhododendron simsii HOM05D007651 ORTHO05D000898 2.1e-18 97.4 323 26.0
CSS0025900 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 5.2e-17 92.8 186 32.8
RhsimUnG0183100 Rhododendron simsii HOM05D000470 ORTHO05D009609 1.7e-15 87.8 162 38.3
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 6.4e-15 85.9 302 24.5
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 2.7e-13 80.5 309 24.3
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 3.5e-13 80.1 291 24.4
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 4.6e-13 79.7 319 24.1
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 5.9e-13 79.3 291 24.4
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 5.9e-13 79.3 291 24.4
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 1.7e-12 77.8 285 24.2
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 1.7e-12 77.8 325 24.3
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 5.0e-12 76.3 329 24.0
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 5.0e-12 76.3 291 24.1
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 5.0e-12 76.3 291 24.1
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 5.0e-12 76.3 291 24.1
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 1.9e-11 74.3 285 24.9
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 4.3e-11 73.2 285 23.5
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 9.5e-11 72.0 291 23.7
FAN15G0550 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.1e-10 70.9 202 25.7
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 3.6e-10 70.1 291 22.7
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 6.2e-10 69.3 291 23.0
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 6.2e-10 69.3 285 23.5
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 1.4e-09 68.2 291 23.4
Rhsim05G0139900 Rhododendron simsii HOM05D007651 ORTHO05D000898 1.4e-09 68.2 241 27.8
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 2.3e-09 67.4 291 23.7
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 5.2e-09 66.2 285 23.5
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 2.0e-08 64.3 194 24.7
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.6e-08 63.9 255 23.9
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.5e-08 62.4 255 22.0
Sabra10G0165800 Salix brachista HOM05D007651 ORTHO05D000898 4.9e-07 59.7 226 27.0
Dinv07106 Davidia involucrata HOM05D008396 ORTHO05D000898 1.4e-06 58.2 211 25.6
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 5.4e-06 56.2 238 23.9
RcHm_v2.0_Chr7g0204351 Rosa chinensis HOM05D007993 ORTHO05D000898 5.4e-06 56.2 241 22.0
Rhsim08G0168100 Rhododendron simsii HOM05D007651 ORTHO05D002997 9.2e-06 55.5 125 33.6


User provided reference genes

Program Settings