Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 7.1e-147 523.9 255 100.0
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 6.4e-132 474.2 253 89.7
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 8.4e-124 447.2 252 86.5
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 2.6e-117 425.6 250 82.4
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 5.9e-117 424.5 253 84.6
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.0e-116 423.7 250 83.2
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.0e-113 413.7 254 80.3
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 1.8e-110 402.9 253 77.5
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 6.9e-110 401.0 250 78.0
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.5e-109 399.8 250 78.8
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 7.7e-109 397.5 253 77.5
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.0e-108 397.1 253 77.1
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.3e-108 396.7 250 78.4
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 2.2e-108 396.0 250 77.2
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 3.8e-108 395.2 251 76.5
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 5.0e-108 394.8 254 75.6
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.1e-107 393.7 253 75.5
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 1.4e-107 393.3 249 78.7
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.5e-107 392.5 254 76.8
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.5e-107 392.5 248 76.6
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 2.5e-107 392.5 250 76.0
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 5.5e-107 391.3 251 76.1
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.2e-106 390.2 250 74.4
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 3.6e-106 388.7 251 74.1
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 4.7e-106 388.3 257 74.7
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.7e-106 388.3 257 74.7
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 4.7e-106 388.3 251 75.3
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 6.1e-106 387.9 250 75.2
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 7.9e-106 387.5 254 74.8
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.0e-105 387.1 256 74.6
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.8e-105 386.3 254 74.8
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.8e-105 386.3 256 76.2
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 3.9e-105 385.2 258 74.0
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.8e-105 384.0 256 73.8
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 1.5e-104 383.3 263 73.8
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 2.0e-104 382.9 247 75.7
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 2.6e-104 382.5 251 74.5
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 4.4e-104 381.7 260 73.5
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 5.7e-104 381.3 256 73.8
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.3e-103 380.2 252 72.2
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.7e-103 379.8 262 74.8
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 2.2e-103 379.4 230 79.6
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 2.8e-103 379.0 212 87.7
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 2.8e-103 379.0 262 74.0
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 3.7e-103 378.6 258 72.1
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 8.2e-103 377.5 256 72.7
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.1e-102 377.1 257 75.1
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 1.1e-102 377.1 253 74.3
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.8e-102 376.3 250 73.2
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 2.4e-102 375.9 258 73.3
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 5.3e-102 374.8 237 77.2
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 7.0e-102 374.4 251 72.9
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 9.1e-102 374.0 253 72.7
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.2e-101 373.6 283 69.3
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 3.8e-100 368.6 222 81.5
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.8e-100 368.6 272 71.0
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 6.5e-100 367.9 256 71.9
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 8.5e-100 367.5 231 76.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.1e-99 367.1 283 67.8
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.9e-99 366.3 252 71.4
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 3.2e-99 365.5 256 71.5
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 3.2e-99 365.5 229 77.3
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 5.5e-99 364.8 210 81.9
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 7.2e-99 364.4 266 68.8
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 9.4e-99 364.0 242 72.7
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 9.4e-99 364.0 242 74.4
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 6.1e-98 361.3 215 83.3
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 8.0e-98 360.9 237 74.7
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 8.0e-98 360.9 318 59.7
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 2.3e-97 359.4 252 73.0
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 3.0e-97 359.0 267 67.8
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 5.2e-97 358.2 239 73.6
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 5.2e-97 358.2 213 80.3
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 6.7e-97 357.8 253 70.0
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.1e-96 357.1 241 73.0
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 4.4e-96 355.1 250 72.8
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 5.7e-96 354.8 244 72.1
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 9.7e-96 354.0 240 70.8
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 4.8e-95 351.7 243 71.2
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 4.8e-95 351.7 326 58.0
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 8.2e-95 350.9 263 65.4
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.8e-94 349.7 268 66.4
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 3.1e-94 349.0 257 68.5
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 5.3e-94 348.2 265 66.4
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 1.2e-93 347.1 264 67.0
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 1.2e-93 347.1 264 67.0
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 1.2e-93 347.1 227 71.8
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.6e-93 346.7 243 71.6
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 3.5e-93 345.5 261 68.2
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 5.9e-93 344.7 261 67.8
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.0e-92 344.0 244 69.7
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.3e-92 343.6 211 80.1
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.2e-92 342.8 246 67.1
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.5e-91 340.1 198 83.8
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 2.5e-91 339.3 208 77.9
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.6e-90 336.7 231 72.3
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 2.7e-90 335.9 208 78.8
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 4.4e-88 328.6 253 64.4
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 2.8e-87 325.9 218 72.5
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 4.5e-85 318.5 202 76.2
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 1.4e-78 297.0 201 71.6
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.7e-76 290.0 335 50.7
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 3.3e-75 285.8 167 84.4
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 4.3e-67 258.8 174 73.6
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 6.1e-66 255.0 226 58.0
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 6.0e-61 238.4 228 50.9
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.2e-58 230.7 156 71.8
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.2e-58 230.7 224 53.1
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 1.1e-57 227.6 232 49.6
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.1e-51 207.6 234 49.1
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.5e-51 207.2 133 77.4
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.2e-50 204.1 137 72.3
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.6e-45 185.7 116 74.1
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 5.1e-44 182.2 146 64.4
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 5.1e-44 182.2 146 64.4
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 2.5e-43 179.9 146 63.7
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 1.8e-41 173.7 114 76.3
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 5.8e-40 168.7 175 52.6
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 6.0e-37 158.7 96 80.2
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 2.8e-34 149.8 122 59.8
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 2.6e-32 143.3 95 74.7
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 2.1e-29 133.7 79 78.5
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.6e-26 124.0 101 62.4
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 5.4e-22 109.0 121 51.2
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 4.5e-16 89.4 47 80.9
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.9e-14 84.0 196 29.6
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 2.1e-13 80.5 114 43.9
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.8e-12 77.4 114 43.0
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 6.3e-10 68.9 60 60.0
Lsat_1_v5_gn_2_43661 Lactuca sativa HOM05D005955 ORTHO05D033925 1.4e-06 57.8 43 65.1


User provided reference genes

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