Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 0.0e+00 1395.9 702 100.0
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 0.0e+00 1115.9 787 74.7
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 9.1e-253 877.1 713 64.5
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 2.5e-242 842.4 616 70.0
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 5.4e-237 824.7 611 69.9
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 8.5e-235 817.4 717 61.4
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.1e-234 817.0 702 62.0
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 6.3e-230 801.2 711 61.3
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 3.1e-229 798.9 709 60.9
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.3e-227 793.5 714 60.4
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 8.0e-225 784.3 711 57.7
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 1.4e-224 783.5 699 59.4
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 3.0e-224 782.3 647 62.3
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 4.4e-223 778.5 716 58.7
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 7.5e-223 777.7 713 57.4
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.3e-222 776.9 705 58.3
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 6.4e-222 774.6 725 57.5
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 2.7e-220 769.2 705 57.0
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 2.8e-217 759.2 708 56.8
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 4.7e-217 758.4 714 56.6
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 8.0e-217 757.7 708 56.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.4e-216 756.9 707 57.1
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.8e-216 756.5 696 58.0
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 9.8e-215 750.7 709 57.4
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.9e-214 749.2 713 56.4
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 8.3e-214 747.7 645 59.4
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 2.4e-213 746.1 714 56.9
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 2.4e-213 746.1 652 58.9
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 2.0e-212 743.0 711 55.6
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 4.6e-212 741.9 713 55.8
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 6.6e-211 738.0 710 55.5
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.1e-210 737.3 707 55.9
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.1e-210 737.3 707 55.6
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.1e-210 737.3 708 55.5
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 7.3e-210 734.6 705 56.0
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.5e-210 734.2 707 55.7
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 3.6e-209 732.3 710 56.8
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 8.9e-208 727.6 720 54.7
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.2e-207 727.2 674 56.8
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.7e-206 723.4 647 58.6
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 8.3e-206 721.1 716 54.3
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 4.1e-205 718.8 701 55.6
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 7.1e-205 718.0 699 54.9
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 9.2e-205 717.6 719 54.5
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.1e-204 716.5 636 57.9
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.7e-204 716.1 726 53.2
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.6e-202 708.4 709 54.9
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 6.2e-201 704.9 649 56.2
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.1e-200 704.1 673 55.9
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.1e-200 702.6 711 54.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 6.8e-200 701.4 674 55.6
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.5e-199 700.3 704 53.6
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 6.6e-195 684.9 690 54.2
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 7.6e-191 671.4 628 56.8
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 3.2e-189 666.0 715 53.0
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 4.2e-189 665.6 606 60.9
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 5.4e-189 665.2 638 54.5
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 3.5e-188 662.5 697 54.7
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 5.1e-187 658.7 619 58.6
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.1e-187 658.7 644 54.0
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.3e-186 656.0 713 51.8
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.4e-184 650.6 629 56.1
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.4e-184 650.6 740 49.6
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 1.2e-183 647.5 704 51.7
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 2.0e-183 646.7 704 52.1
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 9.9e-183 644.4 708 52.8
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 9.9e-183 644.4 707 52.9
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 2.4e-181 639.8 704 51.4
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 3.2e-181 639.4 704 51.4
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.8e-179 633.6 705 51.5
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 1.8e-179 633.6 704 49.9
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 2.3e-179 633.3 606 58.9
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.3e-179 633.3 711 49.8
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 3.0e-179 632.9 704 51.4
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 2.5e-178 629.8 705 50.9
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 7.4e-178 628.2 676 51.2
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 5.3e-176 622.1 727 50.3
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.0e-176 621.3 708 50.8
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 2.2e-174 616.7 542 59.2
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 4.0e-168 595.9 706 49.3
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 1.3e-166 590.9 715 48.4
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.7e-166 590.5 475 64.6
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.2e-161 573.5 524 57.4
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 8.2e-161 571.6 488 61.3
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 5.5e-157 558.9 663 47.4
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.3e-155 554.3 497 58.6
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 3.0e-155 553.1 688 49.6
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 2.0e-151 540.4 483 55.9
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 6.1e-148 528.9 530 54.3
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 5.2e-139 499.2 379 66.8
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 1.0e-134 485.0 357 68.3
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 3.0e-131 473.4 310 75.2
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.4e-128 464.5 687 41.5
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.7e-119 433.7 399 60.4
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 3.3e-117 426.8 314 65.9
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 8.0e-116 422.2 341 64.2
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 5.0e-110 402.9 336 63.4
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.2e-103 381.7 307 62.2
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 8.0e-100 369.0 372 52.2
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 2.9e-97 360.5 662 36.1
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 8.3e-97 359.0 381 49.9
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 3.9e-94 350.1 704 34.9
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.6e-82 310.8 311 57.6
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.7e-81 308.1 606 35.5
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 1.2e-76 292.0 328 49.7
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.3e-73 282.0 667 31.9
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 2.7e-71 274.2 550 35.5
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 7.6e-66 256.1 382 44.2
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.6e-53 213.4 254 44.9
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.3e-52 212.2 176 58.5
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.1e-51 207.6 327 40.4
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 9.3e-48 196.1 178 59.0
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 2.8e-44 184.5 189 52.4
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 9.0e-43 179.5 126 66.7
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 8.2e-36 156.4 125 60.8
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-35 155.2 238 39.9
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.6e-34 151.4 188 46.3
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.2e-31 142.5 300 36.0
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 3.0e-30 137.9 144 44.4
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.1e-24 119.4 165 41.2
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 2.2e-20 105.1 159 41.5
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 4.1e-19 100.9 77 59.7
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 1.3e-17 95.9 124 44.4
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 4.2e-16 90.9 169 36.1
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 5.2e-14 84.0 79 48.1
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 6.8e-14 83.6 369 24.4
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 1.1e-11 76.3 214 29.4
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 5.3e-11 73.9 76 46.1
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 4.5e-10 70.9 315 23.5
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 2.2e-09 68.6 256 25.0
AagrBONN_evm.TU.Sc2ySwM_362.2567 Anthoceros agrestis HOM05D028917 ORTHO05D023487 1.0e-06 59.7 157 29.3
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 8.8e-06 56.6 129 30.2


User provided reference genes

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