Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 1.0e-137 493.4 251 100.0
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 8.9e-134 480.3 251 97.2
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 3.5e-130 468.4 251 95.6
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 9.5e-128 460.3 251 93.6
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 1.2e-127 459.9 251 94.0
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 4.7e-127 458.0 251 93.2
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 4.9e-124 448.0 251 92.0
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 4.9e-124 448.0 251 92.0
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 4.9e-124 448.0 251 92.0
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 4.1e-123 444.9 251 91.6
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 9.2e-123 443.7 243 93.4
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 9.2e-123 443.7 243 93.4
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 3.5e-122 441.8 245 92.2
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 6.0e-122 441.0 243 92.6
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 1.0e-121 440.3 251 90.8
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 1.0e-121 440.3 251 90.8
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 5.0e-121 438.0 245 91.0
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 1.1e-120 436.8 232 96.1
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 7.3e-120 434.1 251 89.6
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 7.3e-120 434.1 240 92.9
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 2.1e-119 432.6 249 88.8
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 2.1e-119 432.6 249 88.8
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 3.6e-119 431.8 240 92.5
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 3.6e-119 431.8 240 92.5
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 3.6e-119 431.8 240 92.5
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 3.1e-118 428.7 251 88.4
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 3.1e-118 428.7 251 88.4
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 6.8e-118 427.6 243 90.5
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 1.2e-117 426.8 240 92.1
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 2.0e-117 426.0 232 93.5
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 3.2e-115 418.7 239 90.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.1e-115 418.3 222 94.6
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.1e-115 418.3 222 94.6
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 9.2e-115 417.2 219 96.3
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 2.7e-114 415.6 244 88.1
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 1.0e-113 413.7 220 95.5
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.3e-113 413.3 233 90.1
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 8.6e-113 410.6 228 92.1
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 1.5e-109 399.8 235 87.7
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 2.6e-109 399.1 213 94.8
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 2.4e-107 392.5 221 89.6
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 3.9e-105 385.2 229 88.2
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 5.6e-104 381.3 214 89.7
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.8e-102 376.3 228 86.8
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 1.5e-101 373.2 203 93.1
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 1.5e-101 373.2 203 93.1
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 6.0e-98 361.3 220 86.4
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 1.0e-97 360.5 192 94.3
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 6.6e-97 357.8 205 87.8
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 4.8e-95 351.7 230 80.9
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 2.4e-94 349.4 201 87.1
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 2.9e-92 342.4 251 74.1
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 4.9e-92 341.7 192 91.7
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 3.2e-91 339.0 198 88.4
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.0e-89 332.4 203 83.3
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 8.7e-89 330.9 170 97.1
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 4.3e-88 328.6 178 91.0
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 1.3e-87 327.0 173 95.4
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 8.1e-87 324.3 171 94.7
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.4e-86 323.6 209 80.4
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 9.0e-86 320.9 175 92.6
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 6.7e-81 304.7 189 85.2
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 8.7e-81 304.3 210 78.6
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.8e-79 299.3 209 77.0
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 1.3e-76 290.4 156 92.3
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-66 257.3 212 67.5
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 6.1e-66 255.0 133 94.7
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 2.5e-59 233.0 129 91.5
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 3.6e-58 229.2 139 84.2
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.6e-58 228.8 130 89.2
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 8.8e-57 224.6 124 91.9
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 1.3e-55 220.7 112 94.6
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 4.4e-48 195.7 144 73.6
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 9.7e-48 194.5 118 82.2
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 1.1e-46 191.0 109 89.0
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 1.0e-44 184.5 107 88.8
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 1.3e-44 184.1 105 90.5
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 2.2e-44 183.3 108 85.2
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 2.7e-42 176.4 98 88.8
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 3.0e-41 172.9 88 94.3
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 5.2e-41 172.2 176 60.2
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 1.8e-38 163.7 101 85.1
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 3.1e-38 162.9 99 86.9
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 2.0e-37 160.2 110 76.4
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 5.5e-35 152.1 96 84.4
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 2.7e-34 149.8 73 97.3
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 6.1e-34 148.7 77 90.9
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 2.3e-33 146.7 75 93.3
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 1.3e-31 141.0 186 41.9
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.1e-30 137.9 69 92.8
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 1.8e-30 137.1 72 88.9
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 5.4e-30 135.6 68 94.1
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.1e-26 123.6 79 78.5
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 3.0e-25 119.8 65 87.7
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 4.0e-25 119.4 60 95.0
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 9.8e-24 114.8 69 82.6
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.7e-23 114.0 90 71.1
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 1.9e-19 100.5 59 88.1
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 9.8e-16 88.2 132 44.7
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 3.7e-15 86.3 54 81.5
SHI21961 Sapria himalayana HOM05D007194 ORTHO05D009182 8.3e-15 85.1 54 83.3
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 2.4e-14 83.6 55 76.4
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 1.9e-11 73.9 37 97.3
Aqoxy4G01620 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.1e-10 70.5 43 86.0
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 6.2e-10 68.9 35 94.3
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 1.5e-08 64.3 46 73.9
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 3.4e-08 63.2 44 75.0


User provided reference genes

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