Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4889 Fragaria x ananassa HOM05D003666 ORTHO05D004770 3.5e-89 331.6 172 100.0
RcHm_v2.0_MTg0498681 Rosa chinensis HOM05D003666 ORTHO05D004770 3.5e-89 331.6 172 100.0
Potri.007G061881 Populus trichocarpa HOM05D003666 ORTHO05D004770 3.3e-87 325.1 172 98.8
SabraMtG0002200 Salix brachista HOM05D003666 ORTHO05D004770 3.3e-87 325.1 172 98.8
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 1.2e-86 323.2 172 98.3
SHI36046 Sapria himalayana HOM05D003666 ORTHO05D004770 6.2e-86 320.9 172 97.7
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 4.4e-84 314.7 172 96.5
Solyc00g500171.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.3e-83 313.2 172 96.5
Solyc00g500188.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.3e-83 313.2 172 96.5
Solyc00g500252.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.3e-83 313.2 172 96.5
Sopen11g018260 Solanum pennellii HOM05D003666 ORTHO05D004770 1.3e-83 313.2 172 96.5
CiPaw.06G021600 Carya illinoinensis HOM05D003666 ORTHO05D004770 8.3e-83 310.5 172 93.6
Nn1g09957 Nelumbo nucifera HOM05D003666 ORTHO05D004770 3.2e-82 308.5 172 94.8
Nn1g09958 Nelumbo nucifera HOM05D003666 ORTHO05D004770 3.2e-82 308.5 172 94.8
Nn1g10168 Nelumbo nucifera HOM05D003666 ORTHO05D004770 3.2e-82 308.5 172 94.8
unitig_87.g28022 Utricularia gibba HOM05D003666 ORTHO05D004770 9.2e-82 307.0 159 98.1
Lj2A1223T77 Lonicera japonica HOM05D003666 ORTHO05D004770 1.4e-77 293.1 169 93.5
arahy.Tifrunner.gnm1.ann1.75QRLF Arachis hypogaea HOM05D003666 ORTHO05D004770 4.0e-77 291.6 158 96.8
arahy.Tifrunner.gnm1.ann1.ZBC6LT Arachis hypogaea HOM05D003666 ORTHO05D004770 4.0e-77 291.6 158 96.8
Lalb_Chr00c24g0407381 Lupinus albus HOM05D003666 ORTHO05D004770 4.0e-77 291.6 158 96.8
Lalb_Chr02g0154061 Lupinus albus HOM05D003666 ORTHO05D004770 2.0e-76 289.3 158 96.2
FAN09G2550 Fragaria x ananassa HOM05D003666 ORTHO05D004770 8.3e-75 283.9 155 94.8
Nitab4.5_0000085g0130 Nicotiana tabacum HOM05D003666 ORTHO05D004770 6.0e-73 277.7 164 89.6
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 5.6e-71 271.2 147 98.0
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 5.6e-71 271.2 147 98.0
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 1.2e-70 270.0 147 98.0
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 1.6e-70 269.6 159 92.5
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.6e-70 269.6 159 92.5
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.6e-70 269.6 159 92.5
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 1.6e-70 269.6 159 92.5
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 4.7e-70 268.1 147 98.0
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 6.8e-69 264.2 142 98.6
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 3.4e-68 261.9 142 97.9
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 7.6e-68 260.8 143 95.8
FAN09G4847 Fragaria x ananassa HOM05D003666 ORTHO05D004770 2.9e-67 258.8 148 95.3
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.1e-66 256.9 143 95.8
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 2.4e-66 255.8 142 96.5
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 4.1e-66 255.0 159 88.1
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 2.1e-65 252.7 162 85.2
CDE02G3669 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 2.3e-64 249.2 138 96.4
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 5.1e-64 248.1 142 94.4
TAR626G0972 Trochodendron aralioides HOM05D003666 ORTHO05D004770 6.6e-64 247.7 157 87.9
CiPaw.15G113100 Carya illinoinensis HOM05D003666 ORTHO05D004770 8.1e-62 240.7 172 76.2
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 1.8e-61 239.6 129 94.6
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 3.1e-61 238.8 126 97.6
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 9.0e-61 237.3 142 91.5
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.1e-58 230.3 129 93.8
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.1e-58 230.3 129 93.8
Gohir.A08G104701 Gossypium hirsutum HOM05D003666 ORTHO05D004770 2.7e-57 225.7 126 92.1
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 2.5e-55 219.2 147 84.4
SEGI_01871 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.3e-51 206.8 152 78.9
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 4.2e-50 201.8 146 79.5
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 5.5e-42 174.9 96 94.8
Lalb_Chr00c54g0413591 Lupinus albus HOM05D003666 ORTHO05D004770 5.5e-42 174.9 144 71.5
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 1.6e-41 173.3 96 93.8
Dinv06696 Davidia involucrata HOM05D003666 ORTHO05D016272 6.7e-40 167.9 92 94.6
BcaC05g26876 Brassica carinata HOM05D003666 ORTHO05D004770 1.3e-30 137.1 77 93.5
Nitab4.5_0000172g1340 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.6e-30 136.7 82 89.0
Migut.L00682 Erythranthe guttata HOM05D003666 ORTHO05D004770 6.9e-29 131.3 104 74.0
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 5.9e-28 128.3 129 48.1
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 1.9e-26 123.2 173 49.7
Nitab4.5_0000172g1330 Nicotiana tabacum HOM05D003666 ORTHO05D016272 1.2e-25 120.6 75 82.7
Pp3c2_30660 Physcomitrium patens HOM05D003666 ORTHO05D004770 3.0e-24 115.9 71 88.7
Gohir.A11G199666 Gossypium hirsutum HOM05D003666 ORTHO05D004770 1.1e-23 114.0 62 96.8
Solyc11g030570.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.7e-22 110.2 63 87.3
GSVIVG01029664001 Vitis vinifera HOM05D003666 ORTHO05D004770 2.4e-21 106.3 54 94.4
Nitab4.5_0010687g0060 Nicotiana tabacum HOM05D003666 ORTHO05D036870 1.2e-20 104.0 55 94.5
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 3.2e-18 95.9 129 38.8
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 3.2e-18 95.9 129 38.8
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 5.5e-18 95.1 129 38.8
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 7.2e-18 94.7 129 38.8
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 9.4e-18 94.4 129 38.0
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 9.4e-18 94.4 129 38.0
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 9.4e-18 94.4 129 38.0
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 9.4e-18 94.4 129 38.0
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 9.4e-18 94.4 129 38.0
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 9.4e-18 94.4 129 38.8
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 1.2e-17 94.0 132 35.6
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.6e-17 93.6 129 37.2
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 1.6e-17 93.6 141 37.6
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 1.6e-17 93.6 129 38.8
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-17 92.4 127 37.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 4.7e-17 92.0 113 41.6
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 4.7e-17 92.0 129 38.0
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 4.7e-17 92.0 141 36.9
Pp3c6_27070 Physcomitrium patens HOM05D003666 ORTHO05D004770 6.1e-17 91.7 62 79.0
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 7.9e-17 91.3 141 36.9
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 1.4e-16 90.5 129 37.2
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 1.8e-16 90.1 141 36.9
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 2.3e-16 89.7 141 36.9
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 2.3e-16 89.7 113 41.6
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.0e-16 89.4 113 40.7
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-16 89.4 113 41.6
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-16 89.4 113 41.6
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 6.7e-16 88.2 141 36.9
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 6.7e-16 88.2 141 36.9
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 6.7e-16 88.2 141 36.9
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 8.8e-16 87.8 141 36.9
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 8.8e-16 87.8 141 36.9
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 8.8e-16 87.8 141 36.9
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 8.8e-16 87.8 146 37.0
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-15 87.4 113 40.7
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 2.0e-15 86.7 114 41.2
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 5.7e-15 85.1 141 36.2
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 5.7e-15 85.1 144 38.9
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 3.1e-13 79.3 101 41.6
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 5.3e-13 78.6 113 37.2
Hma1.2p1_0402F.1_g145120 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 6.9e-13 78.2 51 86.3
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 3.8e-11 72.4 100 35.0
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.4e-10 70.5 39 82.1
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 2.5e-10 69.7 105 34.3
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 5.5e-10 68.6 89 37.1
BolSC44t60820H Brassica oleracea HOM05D001200 ORTHO05D002731 7.2e-10 68.2 92 40.2
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 7.2e-10 68.2 122 32.8
Nitab4.5_0001346g0060 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.1e-09 66.6 34 91.2
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 2.7e-09 66.2 122 33.6
Nitab4.5_0000172g0150 Nicotiana tabacum HOM05D016892 ORTHO05D016272 3.6e-09 65.9 41 82.9
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-08 62.4 89 34.8
RcHm_v2.0_CPg0502801 Rosa chinensis HOM05D001200 ORTHO05D002731 6.7e-08 61.6 76 43.4
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.1e-07 60.8 93 31.2
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 2.0e-07 60.1 124 40.3
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 2.6e-07 59.7 76 42.1
Pp3c23_19840 Physcomitrium patens HOM05D003666 ORTHO05D004770 3.3e-07 59.3 37 73.0
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 9.7e-07 57.8 55 54.5
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 1.3e-06 57.4 86 33.7
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 1.3e-06 57.4 92 35.9
Lalb_Chr13g0292801 Lupinus albus HOM05D001200 ORTHO05D002731 2.8e-06 56.2 91 33.0
BraSC59t46528Z Brassica rapa HOM05D001200 ORTHO05D002731 3.7e-06 55.8 145 30.3


User provided reference genes

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