Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 2.4e-119 432.2 217 100.0
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 4.2e-108 394.8 207 94.7
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 1.1e-103 380.2 207 94.2
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 93.7
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 93.7
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 93.7
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 93.7
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 94.2
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 94.2
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 94.2
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 93.7
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 93.7
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 94.2
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 3.1e-103 378.6 208 91.3
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 4.1e-103 378.3 207 94.2
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 7.0e-103 377.5 207 91.3
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 3.5e-102 375.2 207 92.3
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 1.0e-101 373.6 207 91.3
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 1.0e-101 373.6 207 91.3
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 1.3e-101 373.2 207 92.8
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.9e-100 369.4 207 89.4
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 2.5e-100 369.0 207 91.3
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 4.2e-100 368.2 207 91.8
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 2.1e-99 365.9 207 91.3
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 4.7e-99 364.8 207 91.3
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 5.2e-98 361.3 207 91.3
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 1.5e-97 359.8 196 92.9
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 2.2e-96 355.9 211 86.3
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 1.3e-93 346.7 207 87.0
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 9.2e-87 323.9 177 92.7
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 5.6e-84 314.7 207 78.3
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 5.2e-82 308.1 207 80.7
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 7.0e-79 297.7 181 87.3
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.7e-77 293.1 207 78.3
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 9.5e-76 287.3 160 90.6
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 2.8e-75 285.8 160 90.0
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 6.2e-75 284.6 161 88.8
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 6.8e-66 254.6 144 91.7
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 1.3e-64 250.4 153 83.0
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 6.2e-59 231.5 158 79.1
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 4.4e-57 225.3 146 82.9
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 3.2e-55 219.2 148 75.7
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 4.9e-48 195.3 114 90.4
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 7.4e-44 181.4 100 89.0
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 3.8e-40 169.1 99 89.9
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 1.0e-37 161.0 96 84.4
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 6.7e-37 158.3 104 80.8
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 1.6e-35 153.7 99 83.8
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 3.7e-35 152.5 123 67.5
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 8.1e-35 151.4 91 87.9
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 3.1e-34 149.4 87 90.8
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 7.9e-30 134.8 146 54.8
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 1.8e-29 133.7 99 76.8
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 1.2e-22 110.9 67 89.6
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 3.9e-21 105.9 59 93.2
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 2.2e-19 100.1 66 81.8
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 5.0e-16 89.0 58 72.4
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 1.0e-13 81.3 58 75.9
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 8.5e-08 61.6 88 48.9


User provided reference genes

Program Settings