Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.2e-177 626.3 307 100.0
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.4e-172 608.2 307 96.7
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.4e-172 608.2 307 96.7
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.5e-172 607.8 307 96.7
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.0e-171 606.7 307 96.4
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.8e-171 604.7 307 96.1
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.8e-157 559.3 298 90.3
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 5.5e-154 547.7 304 86.5
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.2e-153 546.6 304 86.2
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.8e-152 542.7 303 86.1
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 5.2e-152 541.2 303 85.8
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 6.8e-152 540.8 301 86.0
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.6e-151 538.9 295 86.8
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 4.4e-151 538.1 296 86.1
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.7e-150 535.0 296 85.8
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.7e-150 535.0 304 84.2
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 3.7e-150 535.0 307 83.1
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 8.3e-150 533.9 295 86.8
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 5.4e-149 531.2 296 85.1
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 5.4e-149 531.2 296 84.5
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 9.1e-149 530.4 287 87.1
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 1.2e-148 530.0 294 84.0
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 2.0e-148 529.3 297 83.8
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 2.7e-148 528.9 296 85.5
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 4.5e-148 528.1 307 81.1
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 3.8e-147 525.0 295 84.1
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 1.1e-146 523.5 301 82.4
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.5e-146 523.1 295 84.7
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 3.2e-146 521.9 295 83.1
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 3.2e-146 521.9 301 82.1
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 4.2e-146 521.5 302 81.5
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 4.2e-146 521.5 291 82.5
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.2e-145 520.0 301 81.4
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 3.6e-145 518.5 289 82.4
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 6.1e-145 517.7 324 78.1
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.0e-144 516.9 301 81.7
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.4e-144 516.5 301 81.7
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.3e-144 515.8 306 79.1
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 5.2e-144 514.6 301 81.4
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 6.8e-144 514.2 315 78.4
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 8.8e-144 513.8 303 78.9
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 2.0e-143 512.7 291 83.2
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 2.0e-143 512.7 301 81.1
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 2.6e-143 512.3 324 77.2
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 2.6e-143 512.3 296 81.1
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 3.4e-143 511.9 290 83.8
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 3.4e-143 511.9 279 88.2
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 9.8e-143 510.4 299 81.3
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.3e-142 510.0 301 80.7
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.2e-142 509.2 286 84.3
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 4.9e-142 508.1 301 80.7
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 4.9e-142 508.1 295 80.7
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 2.0e-140 502.7 296 81.4
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 1.3e-139 500.0 302 79.5
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 8.6e-139 497.3 304 77.3
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 8.6e-139 497.3 297 77.4
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.6e-137 493.0 259 90.7
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 1.0e-136 490.3 298 76.8
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.4e-136 490.0 299 76.9
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.4e-136 490.0 291 77.0
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.8e-136 489.6 293 77.1
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 2.3e-136 489.2 349 68.2
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 3.0e-136 488.8 291 77.3
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.0e-136 488.8 290 80.0
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 5.2e-136 488.0 296 77.4
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.5e-135 486.5 299 77.6
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 4.4e-135 485.0 299 77.3
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 4.4e-135 485.0 291 76.6
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 5.7e-135 484.6 299 75.9
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 5.7e-135 484.6 299 77.3
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 7.5e-135 484.2 336 70.8
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 9.8e-135 483.8 298 78.9
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.3e-134 483.4 299 76.9
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.3e-134 483.4 299 76.9
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.3e-134 483.4 297 76.1
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 1.7e-134 483.0 299 77.6
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.2e-134 482.6 286 80.8
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 2.9e-134 482.3 298 76.2
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 8.3e-134 480.7 296 76.4
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 2.4e-133 479.2 307 72.0
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 4.1e-133 478.4 307 71.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 3.5e-132 475.3 296 76.0
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 5.9e-132 474.6 294 76.2
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 3.0e-131 472.2 291 74.9
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 1.9e-130 469.5 324 71.0
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 3.4e-127 458.8 296 73.0
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 5.8e-127 458.0 295 71.2
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.9e-126 455.7 299 70.6
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 4.9e-126 454.9 302 73.8
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 2.7e-124 449.1 292 76.4
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 7.8e-124 447.6 290 72.1
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 2.5e-122 442.6 268 75.0
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.9e-117 426.4 308 67.2
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 1.1e-104 384.0 213 81.2
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 4.4e-103 378.6 300 60.3
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 4.9e-102 375.2 292 59.9
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 2.5e-98 362.8 300 60.0
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 2.8e-97 359.4 191 87.4
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 3.8e-94 349.0 287 59.9
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.6e-92 343.6 204 76.0
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.8e-88 330.1 198 76.3
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 2.0e-79 300.1 184 76.6
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.1e-72 277.7 159 82.4
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 9.0e-72 274.6 259 51.7
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 6.3e-65 251.9 145 80.0
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.1e-61 241.1 151 72.8
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.0e-55 220.3 152 71.7
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.2e-54 216.9 141 78.0
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 8.8e-43 178.3 110 78.2
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.4e-40 171.0 101 80.2
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.4e-32 144.4 79 88.6
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 7.7e-31 138.7 84 78.6
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.3e-27 127.1 116 59.5
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.7e-25 120.9 64 89.1
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.2e-25 120.6 339 26.8
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.8e-25 120.2 73 74.0
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 4.1e-24 116.3 325 27.4
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.9e-21 107.5 296 24.3
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.2e-10 71.6 41 78.0


User provided reference genes

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