Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0289681 Rosa chinensis HOM05D001049 ORTHO05D016711 5.6e-50 200.7 103 100.0
RcHm_v2.0_Chr5g0020951 Rosa chinensis HOM05D001049 ORTHO05D016711 1.6e-49 199.1 103 99.0
RcHm_v2.0_Chr7g0233891 Rosa chinensis HOM05D001049 ORTHO05D016711 2.3e-27 125.6 75 90.7
RcHm_v2.0_Chr7g0235511 Rosa chinensis HOM05D001049 ORTHO05D001986 4.6e-20 101.3 71 83.1
FvH4_5g34830 Fragaria vesca HOM05D001049 ORTHO05D001986 7.3e-18 94.0 71 78.9
FAN08G0165 Fragaria x ananassa HOM05D001049 ORTHO05D001986 7.3e-18 94.0 71 78.9
FAN18G0905 Fragaria x ananassa HOM05D001049 ORTHO05D001986 1.6e-17 92.8 71 77.5
FAN04G0104 Fragaria x ananassa HOM05D001049 ORTHO05D001986 2.1e-17 92.4 70 78.6
Prupe.1G532800 Prunus persica HOM05D001049 ORTHO05D001986 2.1e-17 92.4 70 75.7
MD08G1199100 Malus domestica HOM05D001049 ORTHO05D001986 6.2e-17 90.9 70 75.7
FAN13G3329 Fragaria x ananassa HOM05D001049 ORTHO05D001986 1.1e-16 90.1 70 77.1
MD15G1386100 Malus domestica HOM05D001049 ORTHO05D001986 1.2e-15 86.7 70 72.9
THA.LOC104806881 Tarenaya hassleriana HOM05D001049 ORTHO05D001986 5.4e-13 77.8 72 56.9
CARHR231920 Cardamine hirsuta HOM05D001049 ORTHO05D001986 2.1e-12 75.9 72 54.2
Lj1g0009282 Lotus japonicus HOM05D001049 ORTHO05D001986 2.7e-12 75.5 68 61.8
THA.LOC104799789 Tarenaya hassleriana HOM05D001049 ORTHO05D001986 4.6e-12 74.7 71 54.9
AUR62019093 Chenopodium quinoa HOM05D001049 ORTHO05D001986 6.0e-12 74.3 70 57.1
AUR62043530 Chenopodium quinoa HOM05D001049 ORTHO05D001986 6.0e-12 74.3 70 57.1
AUR62014350 Chenopodium quinoa HOM05D001049 ORTHO05D001986 7.8e-12 73.9 70 55.7
COL.COLO4_35252 Corchorus olitorius HOM05D001049 ORTHO05D001986 7.8e-12 73.9 70 57.1
Sp7g22520 Schrenkiella parvula HOM05D001049 ORTHO05D001986 7.8e-12 73.9 72 51.4
arahy.Tifrunner.gnm1.ann1.BQAG9X Arachis hypogaea HOM05D001049 ORTHO05D001986 1.3e-11 73.2 69 59.4
arahy.Tifrunner.gnm1.ann1.Q0I0E2 Arachis hypogaea HOM05D001049 ORTHO05D001986 1.3e-11 73.2 69 59.4
Glyma.04G095500 Glycine max HOM05D001049 ORTHO05D001986 1.3e-11 73.2 69 60.9
Lalb_Chr11g0064941 Lupinus albus HOM05D001049 ORTHO05D001986 1.7e-11 72.8 69 55.1
Psat5g046800 Pisum sativum HOM05D001049 ORTHO05D001986 1.7e-11 72.8 69 59.4
Hund26816 Selenicereus undatus HOM05D001049 ORTHO05D001986 2.3e-11 72.4 71 56.3
Glyma.14G182100 Glycine max HOM05D001049 ORTHO05D001986 3.0e-11 72.0 70 60.0
QL09p017878 Quercus lobata HOM05D001049 ORTHO05D001986 3.0e-11 72.0 72 58.3
Carub.0007s1655 Capsella rubella HOM05D001049 ORTHO05D001986 3.9e-11 71.6 72 51.4
Haze_22464 Corylus avellana HOM05D001049 ORTHO05D001986 3.9e-11 71.6 72 61.1
Glyma.06G097200 Glycine max HOM05D001049 ORTHO05D001986 3.9e-11 71.6 69 59.4
Hma1.2p1_0125F.1_g058820 Hydrangea macrophylla HOM05D001049 ORTHO05D001986 3.9e-11 71.6 69 55.1
VMungo1309G0307 Vigna mungo HOM05D001049 ORTHO05D001986 3.9e-11 71.6 69 59.4
Thhalv10024568m.g Eutrema salsugineum HOM05D001049 ORTHO05D001986 5.1e-11 71.2 72 51.4
Gohir.A05G219300 Gossypium hirsutum HOM05D001049 ORTHO05D001986 5.1e-11 71.2 71 57.7
Gohir.D05G221900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 5.1e-11 71.2 71 57.7
Gorai.009G229300 Gossypium raimondii HOM05D001049 ORTHO05D001986 5.1e-11 71.2 71 57.7
Medtr3g100160 Medicago truncatula HOM05D001049 ORTHO05D001986 5.1e-11 71.2 69 56.5
Aa31LG4G9620 Aethionema arabicum HOM05D001049 ORTHO05D001986 6.6e-11 70.9 72 51.4
CiPaw.08G055900 Carya illinoinensis HOM05D001049 ORTHO05D001986 6.6e-11 70.9 72 55.6
Lalb_Chr08g0242561 Lupinus albus HOM05D001049 ORTHO05D001986 6.6e-11 70.9 69 55.1
Phvul.009G036200 Phaseolus vulgaris HOM05D001049 ORTHO05D001986 6.6e-11 70.9 70 54.3
TWI36G0344 Tripterygium wilfordii HOM05D001049 ORTHO05D001986 6.6e-11 70.9 70 55.7
AL7G28700 Arabidopsis lyrata HOM05D001049 ORTHO05D001986 8.7e-11 70.5 72 50.0
CANSAT25G1018 Cannabis sativa HOM05D001049 ORTHO05D001986 8.7e-11 70.5 69 53.6
Cfa013801 Carpinus fangiana HOM05D001049 ORTHO05D001986 8.7e-11 70.5 72 59.7
Sp7g22510 Schrenkiella parvula HOM05D001049 ORTHO05D001986 8.7e-11 70.5 72 51.4
Dinv44863 Davidia involucrata HOM05D001049 ORTHO05D001986 1.1e-10 70.1 68 58.8
AT4G24520 Arabidopsis thaliana HOM05D001049 ORTHO05D001986 1.9e-10 69.3 72 50.0
Rhsim07G0212200 Rhododendron simsii HOM05D001049 ORTHO05D001986 2.5e-10 68.9 70 52.9
BraA01t01522Z Brassica rapa HOM05D001049 ORTHO05D001986 3.3e-10 68.6 69 53.6
Thecc.08G071500 Theobroma cacao HOM05D001049 ORTHO05D001986 3.3e-10 68.6 71 54.9
GSVIVG01009185001 Vitis vinifera HOM05D001049 ORTHO05D001986 3.3e-10 68.6 71 56.3
A01p15890 Brassica napus HOM05D001049 ORTHO05D001986 4.3e-10 68.2 72 45.8
BraA01t01523Z Brassica rapa HOM05D001049 ORTHO05D001986 4.3e-10 68.2 72 45.8
A03p55340 Brassica napus HOM05D001049 ORTHO05D001986 5.6e-10 67.8 72 44.4
Cpa.g.c29936.1 Carica papaya HOM05D001049 ORTHO05D017630 5.6e-10 67.8 70 48.6
Manes.18G058200 Manihot esculenta HOM05D001049 ORTHO05D001986 5.6e-10 67.8 70 52.9
vmacro04647 Vaccinium macrocarpon HOM05D001049 ORTHO05D001986 5.6e-10 67.8 71 53.5
Potri.002G106632 Populus trichocarpa HOM05D001049 ORTHO05D001986 7.3e-10 67.4 70 57.1
Hund17286 Selenicereus undatus HOM05D001049 ORTHO05D001986 7.3e-10 67.4 70 50.0
TWI56G1361 Tripterygium wilfordii HOM05D001049 ORTHO05D001986 7.3e-10 67.4 70 52.9
Ca_01353_v3 Cicer arietinum L. HOM05D001049 ORTHO05D014288 9.6e-10 67.0 69 52.2
Ciclev10000469m.g Citrus clementina HOM05D001049 ORTHO05D001986 9.6e-10 67.0 70 50.0
Potri.005G153800 Populus trichocarpa HOM05D001049 ORTHO05D001986 9.6e-10 67.0 70 57.1
BolC7t45855H Brassica oleracea HOM05D001049 ORTHO05D001986 1.3e-09 66.6 72 44.4
EL10Ac1g00992 Beta vulgaris HOM05D001049 ORTHO05D001986 1.6e-09 66.2 70 50.0
BcaC09g50859 Brassica carinata HOM05D001049 ORTHO05D001986 1.6e-09 66.2 73 45.2
C01p19840 Brassica napus HOM05D001049 ORTHO05D001986 1.6e-09 66.2 73 45.2
BolC1t01911H Brassica oleracea HOM05D001049 ORTHO05D001986 1.6e-09 66.2 73 45.2
Duzib041G0510 Durio zibethinus HOM05D001049 ORTHO05D001986 1.6e-09 66.2 71 56.3
PGR042G3763 Punica granatum HOM05D001049 ORTHO05D001986 1.6e-09 66.2 68 55.9
A01p15880 Brassica napus HOM05D001049 ORTHO05D001986 2.1e-09 65.9 68 52.9
BraA03t14593Z Brassica rapa HOM05D001049 ORTHO05D001986 2.1e-09 65.9 72 43.1
MSTRG.24430 Avicennia marina HOM05D001049 ORTHO05D001986 2.8e-09 65.5 71 53.5
BcaC06g32879 Brassica carinata HOM05D001049 ORTHO05D001986 2.8e-09 65.5 72 44.4
C07p53630 Brassica napus HOM05D001049 ORTHO05D001986 2.8e-09 65.5 72 44.4
Duzib093G0120 Durio zibethinus HOM05D001049 ORTHO05D001986 4.8e-09 64.7 71 53.5
Atru.chr7.616 Acer truncatum HOM05D001049 ORTHO05D001986 6.2e-09 64.3 78 51.3
BcaC09g50860 Brassica carinata HOM05D001049 ORTHO05D001986 8.1e-09 63.9 68 50.0
Atru.chr13.1005 Acer truncatum HOM05D001049 ORTHO05D001986 1.4e-08 63.2 72 51.4
CARHR231910 Cardamine hirsuta HOM05D001049 ORTHO05D001986 1.4e-08 63.2 72 45.8
Lj4C738G5 Lonicera japonica HOM05D001049 ORTHO05D001986 1.4e-08 63.2 97 42.3
Lalb_Chr04g0252811 Lupinus albus HOM05D001049 ORTHO05D001986 1.4e-08 63.2 70 50.0
Manes.18G058100 Manihot esculenta HOM05D001049 ORTHO05D001986 1.4e-08 63.2 70 52.9
Sabra02G0083900 Salix brachista HOM05D001049 ORTHO05D001986 1.4e-08 63.2 69 55.1
C01p19820 Brassica napus HOM05D001049 ORTHO05D001986 1.8e-08 62.8 71 46.5
BolC1t01910H Brassica oleracea HOM05D001049 ORTHO05D001986 1.8e-08 62.8 71 46.5
Nn5g29871 Nelumbo nucifera HOM05D001049 ORTHO05D001986 1.8e-08 62.8 68 51.5
TPR.G6360 Trifolium pratense HOM05D001049 ORTHO05D001986 1.8e-08 62.8 64 54.7
Migut.N02860 Erythranthe guttata HOM05D001049 ORTHO05D001986 2.4e-08 62.4 71 46.5
Phvul.008G182200 Phaseolus vulgaris HOM05D001049 ORTHO05D001986 3.1e-08 62.0 70 54.3
AUR62033215 Chenopodium quinoa HOM05D001049 ORTHO05D001986 4.0e-08 61.6 80 48.8
Lj4C717G5 Lonicera japonica HOM05D001049 ORTHO05D001986 6.9e-08 60.8 69 52.2
Hund09029 Selenicereus undatus HOM05D001049 ORTHO05D001986 9.0e-08 60.5 81 45.7
Lsat_1_v5_gn_8_67661 Lactuca sativa HOM05D001049 ORTHO05D001986 1.5e-07 59.7 78 43.6
CDE07G0189 Ceratophyllum demersum HOM05D001049 ORTHO05D001986 2.0e-07 59.3 65 58.5
EL10Ac8g18281 Beta vulgaris HOM05D001049 ORTHO05D001986 4.5e-07 58.2 79 44.3
CANSAT11G1186 Cannabis sativa HOM05D001049 ORTHO05D001986 4.5e-07 58.2 67 52.2
MELO3C017461.2 Cucumis melo HOM05D001049 ORTHO05D001986 4.5e-07 58.2 67 52.2
Gohir.A01G126300 Gossypium hirsutum HOM05D001049 ORTHO05D001986 4.5e-07 58.2 71 52.1
ClCG06G013360 Citrullus lanatus HOM05D001049 ORTHO05D001986 5.8e-07 57.8 67 55.2
CsaV3_1G031610 Cucumis sativus L. HOM05D001049 ORTHO05D001986 5.8e-07 57.8 67 52.2
Gohir.A05G004900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 5.8e-07 57.8 81 49.4
SGA_v2.0_scaffold48G17826 Striga asiatica HOM05D001049 ORTHO05D001986 5.8e-07 57.8 71 47.9
TAR636G1193 Trochodendron aralioides HOM05D001049 ORTHO05D001986 5.8e-07 57.8 78 47.4
Cc10_g15930 Coffea canephora HOM05D001049 ORTHO05D001986 7.6e-07 57.4 70 47.1
Lj5A7T12 Lonicera japonica HOM05D001049 ORTHO05D001986 7.6e-07 57.4 67 55.2
Sed0028040 Sechium edule HOM05D001049 ORTHO05D001986 7.6e-07 57.4 67 53.7
Dinv42720 Davidia involucrata HOM05D001049 ORTHO05D001986 9.9e-07 57.0 68 54.4
Dinv43381 Davidia involucrata HOM05D001049 ORTHO05D001986 9.9e-07 57.0 68 54.4
Gohir.D01G113900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 9.9e-07 57.0 71 52.1
Gorai.002G138900 Gossypium raimondii HOM05D001049 ORTHO05D001986 9.9e-07 57.0 71 52.1
Nitab4.5_0000131g0220 Nicotiana tabacum HOM05D001049 ORTHO05D001986 9.9e-07 57.0 69 47.8
Nitab4.5_0005913g0030 Nicotiana tabacum HOM05D001049 ORTHO05D001986 1.3e-06 56.6 69 47.8
Sed0013601 Sechium edule HOM05D001049 ORTHO05D001986 1.3e-06 56.6 67 52.2
TWI63G1242 Tripterygium wilfordii HOM05D001049 ORTHO05D001986 1.3e-06 56.6 81 48.1
ECA234G4507 Erigeron canadensis HOM05D001049 ORTHO05D001986 1.7e-06 56.2 86 44.2
Gorai.009G005600 Gossypium raimondii HOM05D001049 ORTHO05D001986 1.7e-06 56.2 81 46.9
RcHm_v2.0_Chr4g0402391 Rosa chinensis HOM05D001049 ORTHO05D001986 1.7e-06 56.2 78 51.3
Sc15g0002720 Simmondsia chinensis HOM05D001049 ORTHO05D001986 1.7e-06 56.2 58 48.3
TAR383G0189 Trochodendron aralioides HOM05D001049 ORTHO05D001986 1.7e-06 56.2 68 54.4
Gohir.D05G005800 Gossypium hirsutum HOM05D001049 ORTHO05D001986 2.2e-06 55.8 81 45.7
MBI16_g39836_MAGBIO Magnolia biondii HOM05D001049 ORTHO05D001986 2.2e-06 55.8 68 45.6
Potri.006G167200 Populus trichocarpa HOM05D001049 ORTHO05D001986 2.2e-06 55.8 67 53.7
TAR381G0764 Trochodendron aralioides HOM05D001049 ORTHO05D001986 2.2e-06 55.8 70 48.6
CAN.G475.20 Capsicum annuum HOM05D001049 ORTHO05D001986 2.9e-06 55.5 69 47.8
ECA236G3859 Erigeron canadensis HOM05D001049 ORTHO05D001986 2.9e-06 55.5 83 43.4
Gohir.D08G034000 Gossypium hirsutum HOM05D001049 ORTHO05D001986 2.9e-06 55.5 79 48.1
Peaxi162Scf00454g00327 Petunia axillaris HOM05D001049 ORTHO05D001986 2.9e-06 55.5 69 49.3
Sopen00g012550 Solanum pennellii HOM05D001049 ORTHO05D016711 2.9e-06 55.5 74 44.6
Thecc.09G177300 Theobroma cacao HOM05D001049 ORTHO05D001986 2.9e-06 55.5 67 52.2
Cpa.g.sc233.8 Carica papaya HOM05D001049 ORTHO05D001986 3.8e-06 55.1 67 52.2
CiPaw.07G192400 Carya illinoinensis HOM05D001049 ORTHO05D001986 3.8e-06 55.1 67 52.2
Duzib150G1377 Durio zibethinus HOM05D001049 ORTHO05D001986 3.8e-06 55.1 67 52.2
QL02p097801 Quercus lobata HOM05D001049 ORTHO05D001986 3.8e-06 55.1 66 51.5
RcHm_v2.0_Chr4g0402381 Rosa chinensis HOM05D001049 ORTHO05D001986 3.8e-06 55.1 67 53.7
FAN07G2539 Fragaria x ananassa HOM05D001049 ORTHO05D001986 4.9e-06 54.7 67 53.7
FAN17G0476 Fragaria x ananassa HOM05D001049 ORTHO05D001986 4.9e-06 54.7 67 53.7
Solyc04g076380.4 Solanum lycopersicum HOM05D001049 ORTHO05D001986 4.9e-06 54.7 69 47.8
PGSC0003DMG400009340 Solanum tuberosum HOM05D001049 ORTHO05D001986 4.9e-06 54.7 69 47.8
TAR615G0001 Trochodendron aralioides HOM05D001049 ORTHO05D001986 4.9e-06 54.7 80 47.5
Aqoxy6G00858 Aquilegia oxysepala HOM05D001049 ORTHO05D001986 6.4e-06 54.3 71 43.7
CiPaw.08G036100 Carya illinoinensis HOM05D001049 ORTHO05D001986 6.4e-06 54.3 66 53.0
Lsat_1_v5_gn_5_85441 Lactuca sativa HOM05D001049 ORTHO05D001986 6.4e-06 54.3 79 43.0
GSVIVG01029213001 Vitis vinifera HOM05D001049 ORTHO05D001986 6.4e-06 54.3 66 53.0
CDE05G0754 Ceratophyllum demersum HOM05D001049 ORTHO05D021084 8.4e-06 53.9 67 49.3
Haze_22094 Corylus avellana HOM05D001049 ORTHO05D001986 8.4e-06 53.9 67 50.7
Dinv41245 Davidia involucrata HOM05D001049 ORTHO05D001986 8.4e-06 53.9 67 47.8
Duzib168G0135 Durio zibethinus HOM05D001049 ORTHO05D001986 8.4e-06 53.9 67 52.2
FAN22G1504 Fragaria x ananassa HOM05D001049 ORTHO05D001986 8.4e-06 53.9 67 53.7
Lalb_Chr07g0180491 Lupinus albus HOM05D001049 ORTHO05D001986 8.4e-06 53.9 82 45.1
Nn2g12771 Nelumbo nucifera HOM05D001049 ORTHO05D001986 8.4e-06 53.9 78 42.3
Psat0s2718g0080 Pisum sativum HOM05D001049 ORTHO05D001986 8.4e-06 53.9 80 47.5
vmacro13126 Vaccinium macrocarpon HOM05D001049 ORTHO05D001986 8.4e-06 53.9 68 50.0


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