Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001049', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '579', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p07920' => 'bna', 'A01p15880' => 'bna', 'A01p15890' => 'bna', 'A01p22950' => 'bna', 'A01p37190' => 'bna', 'A03p32880' => 'bna', 'A03p55340' => 'bna', 'A03p59610' => 'bna', 'A05p32700' => 'bna', 'A08p19350' => 'bna', 'Aa31LG2G20320' => 'aar', 'Aa31LG4G9620' => 'aar', 'Aa31LG5G12810' => 'aar', 'Aa31LG8G15960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3817' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.439' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1703' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_340.441' => 'aag', 'Actinidia02749' => 'ach', 'Actinidia08191' => 'ach', 'Actinidia08192' => 'ach', 'Actinidia15878' => 'ach', 'Actinidia15879' => 'ach', 'Actinidia19245' => 'ach', 'Actinidia19628' => 'ach', 'Actinidia19831' => 'ach', 'Actinidia27012' => 'ach', 'Actinidia38634' => 'ach', 'Ah.01g008960' => 'amhyb', 'Ah.05g171320' => 'amhyb', 'Ah.09g229840' => 'amhyb', 'Ah.10g037600' => 'amhyb', 'Ah.14g083860' => 'amhyb', 'AL3G11560' => 'aly', 'AL777U10010' => 'aly', 'AL7G21940' => 'aly', 'AL7G28700' => 'aly', 'Aqoxy3G03945' => 'aox', 'Aqoxy6G00858' => 'aox', 'Aqoxy7G03051' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2XG0SD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQAG9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBV3FR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0I0E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPBB19' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXV5G1' => 'arhy', 'AT3G02280' => 'ath', 'AT3G24710' => 'ath', 'AT4G24520' => 'ath', 'AT4G30210' => 'ath', 'ATR0564G081' => 'atr', 'ATR0564G359' => 'atr', 'ATR0580G449' => 'atr', 'Atru.chr13.1005' => 'acertr', 'Atru.chr13.1275' => 'acertr', 'Atru.chr7.1178' => 'acertr', 'Atru.chr7.616' => 'acertr', 'AUR62008979' => 'cqu', 'AUR62014350' => 'cqu', 'AUR62014524' => 'cqu', 'AUR62019093' => 'cqu', 'AUR62021298' => 'cqu', 'AUR62033215' => 'cqu', 'AUR62043530' => 'cqu', 'BcaB01g02067' => 'bca', 'BcaB04g17099' => 'bca', 'BcaB06g26054' => 'bca', 'BcaB06g26057' => 'bca', 'BcaB07g33014' => 'bca', 'BcaB08g34532' => 'bca', 'BcaC01g01164' => 'bca', 'BcaC01g04452' => 'bca', 'BcaC01g04542' => 'bca', 'BcaC05g28232' => 'bca', 'BcaC05g28235' => 'bca', 'BcaC06g32879' => 'bca', 'BcaC07g37699' => 'bca', 'BcaC09g50859' => 'bca', 'BcaC09g50860' => 'bca', 'BcaC09g51804' => 'bca', 'BcaNung00530' => 'bca', 'BcaNung06311' => 'bca', 'BcaNung06377' => 'bca', 'BolC1t00875H' => 'bol', 'BolC1t01910H' => 'bol', 'BolC1t01911H' => 'bol', 'BolC3t16266H' => 'bol', 'BolC3t21192H' => 'bol', 'BolC3t21193H' => 'bol', 'BolC4t24578H' => 'bol', 'BolC5t33015H' => 'bol', 'BolC5t33017H' => 'bol', 'BolC7t45855H' => 'bol', 'BolC7t46229H' => 'bol', 'BolC8t47349H' => 'bol', 'BolC8t48085H' => 'bol', 'BraA01t00738Z' => 'bra', 'BraA01t01522Z' => 'bra', 'BraA01t01523Z' => 'bra', 'BraA01t03780Z' => 'bra', 'BraA03t12457Z' => 'bra', 'BraA03t14593Z' => 'bra', 'BraA03t15018Z' => 'bra', 'BraA08t33896Z' => 'bra', 'C01p08840' => 'bna', 'C01p19820' => 'bna', 'C01p19840' => 'bna', 'C03p40010' => 'bna', 'C03p88810' => 'bna', 'C05p42860' => 'bna', 'C07p53630' => 'bna', 'C07p57650' => 'bna', 'CAN.G1165.2' => 'can', 'CAN.G440.3' => 'can', 'CAN.G475.20' => 'can', 'CAN.G625.5' => 'can', 'CAN.G852.5' => 'can', 'CANSAT11G1186' => 'cansat', 'CANSAT25G1018' => 'cansat', 'CANSAT64G1724' => 'cansat', 'CARHR076240' => 'chi', 'CARHR231910' => 'chi', 'CARHR231920' => 'chi', 'CARHR238120' => 'chi', 'CARHR246570' => 'chi', 'Carub.0003s0139' => 'cru', 'Carub.0003s2478' => 'cru', 'Carub.0007s1040' => 'cru', 'Carub.0007s1655' => 'cru', 'Ca_01353_v3' => 'car', 'Ca_04065_v3' => 'car', 'Ca_21228_v3' => 'car', 'Ca_23435_v3' => 'car', 'CBR_g45849' => 'cbr', 'CBR_g66801' => 'cbr', 'CBR_g76440' => 'cbr', 'Cc06_g13220' => 'ccan', 'Cc07_g08880' => 'ccan', 'Cc10_g15930' => 'ccan', 'CDE02G0228' => 'cde', 'CDE04G0722' => 'cde', 'CDE04G2168' => 'cde', 'CDE05G0709' => 'cde', 'CDE05G0754' => 'cde', 'CDE05G1223' => 'cde', 'CDE05G2069' => 'cde', 'CDE05G2137' => 'cde', 'CDE05G2905' => 'cde', 'CDE07G0189' => 'cde', 'Cfa013502' => 'cfa', 'Cfa013801' => 'cfa', 'Cfa022576' => 'cfa', 'Cfa023262' => 'cfa', 'Cfa023480' => 'cfa', 'Ciclev10000469m.g' => 'ccl', 'Ciclev10000583m.g' => 'ccl', 'Ciclev10007535m.g' => 'ccl', 'CiPaw.04G041100' => 'cil', 'CiPaw.07G192400' => 'cil', 'CiPaw.08G036100' => 'cil', 'CiPaw.08G055900' => 'cil', 'ClCG06G013360' => 'cla', 'ClCG07G017080' => 'cla', 'ClCG11G012150' => 'cla', 'COL.COLO4_25241' => 'col', 'COL.COLO4_25242' => 'col', 'COL.COLO4_35252' => 'col', 'COL.COLO4_37704' => 'col', 'Cpa.g.c29936.1' => 'cpa', 'Cpa.g.sc179.4' => 'cpa', 'Cpa.g.sc21.27' => 'cpa', 'Cpa.g.sc233.8' => 'cpa', 'Cre01.g039350' => 'cre', 'Cre03.g180300' => 'cre', 'Cre12.g551850' => 'cre', 'Cre16.g683550' => 'cre', 'CsaV3_1G031610' => 'csa', 'CsaV3_2G008410' => 'csa', 'CsaV3_4G004300' => 'csa', 'CSS0024879' => 'camsi', 'CSS0032537' => 'camsi', 'CSS0037498' => 'camsi', 'CSS0043035' => 'camsi', 'CSS0049553' => 'camsi', 'DCAR_014700' => 'dca', 'DCAR_017970' => 'dca', 'DCAR_019602' => 'dca', 'DCAR_020124' => 'dca', 'DCAR_029529' => 'dca', 'DCAR_029530' => 'dca', 'Dinv34836' => 'din', 'Dinv41245' => 'din', 'Dinv42608' => 'din', 'Dinv42720' => 'din', 'Dinv43381' => 'din', 'Dinv44863' => 'din', 'Duzib041G0510' => 'dzi', 'Duzib093G0120' => 'dzi', 'Duzib150G0039' => 'dzi', 'Duzib150G1377' => 'dzi', 'Duzib168G0135' => 'dzi', 'Duzib170G0377' => 'dzi', 'ECA234G4507' => 'eca', 'ECA236G0274' => 'eca', 'ECA236G3859' => 'eca', 'ECA238G2427' => 'eca', 'ECA240G1318' => 'eca', 'EL10Ac1g00992' => 'bvu', 'EL10Ac2g04590' => 'bvu', 'EL10Ac8g18281' => 'bvu', 'Eucgr.C00154' => 'egr', 'Eucgr.C02330' => 'egr', 'Eucgr.J01497' => 'egr', 'FAN01G0915' => 'fan', 'FAN02G0215' => 'fan', 'FAN03G1095' => 'fan', 'FAN04G0104' => 'fan', 'FAN05G1438' => 'fan', 'FAN07G2539' => 'fan', 'FAN08G0165' => 'fan', 'FAN09G1302' => 'fan', 'FAN10G0721' => 'fan', 'FAN11G1854' => 'fan', 'FAN12G1664' => 'fan', 'FAN13G3329' => 'fan', 'FAN14G1155' => 'fan', 'FAN14G2476' => 'fan', 'FAN17G0476' => 'fan', 'FAN18G0905' => 'fan', 'FAN18G0950' => 'fan', 'FAN19G0265' => 'fan', 'FAN22G1504' => 'fan', 'FvH4_1g29080' => 'fve', 'FvH4_3g26990' => 'fve', 'FvH4_4g08180' => 'fve', 'FvH4_5g10660' => 'fve', 'FvH4_5g34830' => 'fve', 'FvH4_6g45220' => 'fve', 'FvH4_7g05330' => 'fve', 'FvH4_7g05331' => 'fve', 'Glyma.02G160251' => 'gma', 'Glyma.02G214700' => 'gma', 'Glyma.04G095500' => 'gma', 'Glyma.06G097200' => 'gma', 'Glyma.08G364302' => 'gma', 'Glyma.13G096500' => 'gma', 'Glyma.14G182100' => 'gma', 'Glyma.17G063000' => 'gma', 'Glyma.18G297800' => 'gma', 'Gohir.A01G126300' => 'ghi', 'Gohir.A05G004900' => 'ghi', 'Gohir.A05G219300' => 'ghi', 'Gohir.A05G360900' => 'ghi', 'Gohir.A07G116600' => 'ghi', 'Gohir.A08G023216' => 'ghi', 'Gohir.A08G023408' => 'ghi', 'Gohir.A08G023416' => 'ghi', 'Gohir.D01G113900' => 'ghi', 'Gohir.D04G100432' => 'ghi', 'Gohir.D04G111100' => 'ghi', 'Gohir.D05G005800' => 'ghi', 'Gohir.D05G221900' => 'ghi', 'Gohir.D07G121000' => 'ghi', 'Gohir.D08G034000' => 'ghi', 'Gohir.D08G111608' => 'ghi', 'Gohir.D10G139266' => 'ghi', 'Gohir.D11G131600' => 'ghi', 'Gohir.D11G228980' => 'ghi', 'Gorai.001G130600' => 'gra', 'Gorai.002G138900' => 'gra', 'Gorai.004G031600' => 'gra', 'Gorai.004G119600' => 'gra', 'Gorai.006G045500' => 'gra', 'Gorai.009G005600' => 'gra', 'Gorai.009G229300' => 'gra', 'GSVIVG01009185001' => 'vvi', 'GSVIVG01014384001' => 'vvi', 'GSVIVG01014385001' => 'vvi', 'GSVIVG01029213001' => 'vvi', 'GSVIVG01031054001' => 'vvi', 'HanXRQChr02g0034591' => 'han', 'HanXRQChr05g0142991' => 'han', 'HanXRQChr09g0244761' => 'han', 'HanXRQChr09g0254451' => 'han', 'HanXRQChr09g0255411' => 'han', 'HanXRQChr12g0358291' => 'han', 'HanXRQChr12g0358301' => 'han', 'HanXRQChr12g0365411' => 'han', 'HanXRQChr12g0376471' => 'han', 'HanXRQChr13g0412341' => 'han', 'HanXRQChr14g0429191' => 'han', 'Haze_22094' => 'cav', 'Haze_22464' => 'cav', 'Hma1.2p1_0125F.1_g058820' => 'hma', 'Hma1.2p1_0550F.1_g177330' => 'hma', 'Hma1.2p1_1025F.1_g249330' => 'hma', 'Hma1.2p1_3581F.1_g336840' => 'hma', 'HPP92_003525' => 'vpl', 'HPP92_005481' => 'vpl', 'HPP92_010748' => 'vpl', 'HPP92_015367' => 'vpl', 'HPP92_018334' => 'vpl', 'HPP92_018376' => 'vpl', 'Hund01739' => 'sun', 'Hund09029' => 'sun', 'Hund13726' => 'sun', 'Hund17286' => 'sun', 'Hund26351' => 'sun', 'Hund26816' => 'sun', 'Lalb_Chr04g0252811' => 'lal', 'Lalb_Chr07g0180491' => 'lal', 'Lalb_Chr08g0242561' => 'lal', 'Lalb_Chr10g0091161' => 'lal', 'Lalb_Chr11g0064941' => 'lal', 'Lalb_Chr12g0199431' => 'lal', 'Lj1g0009282' => 'lja', 'Lj1g0012839' => 'lja', 'Lj1g0028233' => 'lja', 'Lj4C194T12' => 'lonja', 'Lj4C717G5' => 'lonja', 'Lj4C738G5' => 'lonja', 'Lj4g0000806' => 'lja', 'Lj4g0009595' => 'lja', 'Lj5A7T12' => 'lonja', 'Lj6g0008823' => 'lja', 'Lj6g0018247' => 'lja', 'Lj9A24T28' => 'lonja', 'Lj9C26T2' => 'lonja', 'Lsat_1_v5_gn_0_21360' => 'lsa', 'Lsat_1_v5_gn_2_110721' => 'lsa', 'Lsat_1_v5_gn_2_110801' => 'lsa', 'Lsat_1_v5_gn_2_9800' => 'lsa', 'Lsat_1_v5_gn_3_129101' => 'lsa', 'Lsat_1_v5_gn_3_81881' => 'lsa', 'Lsat_1_v5_gn_5_79581' => 'lsa', 'Lsat_1_v5_gn_5_85441' => 'lsa', 'Lsat_1_v5_gn_6_70320' => 'lsa', 'Lsat_1_v5_gn_6_72241' => 'lsa', 'Lsat_1_v5_gn_7_115600' => 'lsa', 'Lsat_1_v5_gn_7_54581' => 'lsa', 'Lsat_1_v5_gn_8_1281' => 'lsa', 'Lsat_1_v5_gn_8_67661' => 'lsa', 'Lsat_1_v5_gn_9_32960' => 'lsa', 'Lsat_1_v5_gn_9_87640' => 'lsa', 'Lsat_1_v5_gn_9_87680' => 'lsa', 'Manes.01G109200' => 'mes', 'Manes.14G154000' => 'mes', 'Manes.18G058100' => 'mes', 'Manes.18G058200' => 'mes', 'Mapoly0012s0011' => 'mpo', 'Mapoly0159s0022' => 'mpo', 'MBI04_g11121_MAGBIO' => 'mbi', 'MBI14_g17372_MAGBIO' => 'mbi', 'MBI15_g39956_MAGBIO' => 'mbi', 'MBI16_g27571_MAGBIO' => 'mbi', 'MBI16_g39836_MAGBIO' => 'mbi', 'MBI19_g21647_MAGBIO' => 'mbi', 'MBI19_g21649_MAGBIO' => 'mbi', 'MBI19_g21650_MAGBIO' => 'mbi', 'MCO01G527' => 'mco', 'MCO02G064' => 'mco', 'MCO06G260' => 'mco', 'MD08G1199100' => 'mdo', 'MD09G1086400' => 'mdo', 'MD09G1086700' => 'mdo', 'MD09G1087200' => 'mdo', 'MD12G1122800' => 'mdo', 'MD13G1253300' => 'mdo', 'MD15G1386100' => 'mdo', 'MD16G1257600' => 'mdo', 'Medtr1g102950' => 'mtr', 'Medtr3g100160' => 'mtr', 'Medtr4g128020' => 'mtr', 'Medtr7g101180' => 'mtr', 'Medtr7g406970' => 'mtr', 'MELO3C004023.2' => 'cme', 'MELO3C017461.2' => 'cme', 'MELO3C017636.2' => 'cme', 'Migut.J01483' => 'egut', 'Migut.K00241' => 'egut', 'Migut.L00308' => 'egut', 'Migut.N02860' => 'egut', 'MSTRG.10739' => 'ama', 'MSTRG.19708' => 'ama', 'MSTRG.24430' => 'ama', 'MSTRG.6220' => 'ama', 'Nitab4.5_0000131g0220' => 'nta', 'Nitab4.5_0000455g0070' => 'nta', 'Nitab4.5_0001569g0100' => 'nta', 'Nitab4.5_0001972g0020' => 'nta', 'Nitab4.5_0004944g0040' => 'nta', 'Nitab4.5_0005199g0010' => 'nta', 'Nitab4.5_0005913g0030' => 'nta', 'Nn1g05589' => 'nnu', 'Nn2g12771' => 'nnu', 'Nn3g17797' => 'nnu', 'Nn5g29378' => 'nnu', 'Nn5g29871' => 'nnu', 'Nn6g35206' => 'nnu', 'Nn7g37415' => 'nnu', 'Nn8g40480' => 'nnu', 'Oeu009850.1' => 'oeu', 'Oeu012755.1' => 'oeu', 'Oeu025212.1' => 'oeu', 'Oeu033941.2' => 'oeu', 'Oeu042169.1' => 'oeu', 'Oeu044321.1' => 'oeu', 'Oeu056511.1' => 'oeu', 'Oeu064372.1' => 'oeu', 'Os01g0733600' => 'osa', 'Os04g0653400' => 'osa', 'Os07g0496600' => 'osa', 'Os08g0243500' => 'osa', 'Os09g0558900' => 'osa', 'Peaxi162Scf00231g00617' => 'pax', 'Peaxi162Scf00454g00327' => 'pax', 'Peaxi162Scf00814g00241' => 'pax', 'PGR042G0664' => 'pgr', 'PGR042G3763' => 'pgr', 'PGR044G1953' => 'pgr', 'PGSC0003DMG400009340' => 'stu', 'PGSC0003DMG400012672' => 'stu', 'PGSC0003DMG400013779' => 'stu', 'Phvul.003G145400' => 'pvu', 'Phvul.008G004800' => 'pvu', 'Phvul.008G182200' => 'pvu', 'Phvul.009G036200' => 'pvu', 'Potri.002G106566' => 'ptr', 'Potri.002G106632' => 'ptr', 'Potri.004G101100' => 'ptr', 'Potri.005G153800' => 'ptr', 'Potri.006G167200' => 'ptr', 'Potri.011G027100' => 'ptr', 'Potri.018G092100' => 'ptr', 'Pp3c14_22890' => 'ppa', 'Pp3c17_22110' => 'ppa', 'Pp3c20_9680' => 'ppa', 'Pp3c24_17560' => 'ppa', 'Pp3c8_19940' => 'ppa', 'Pp3c9_18000' => 'ppa', 'PRCOL_00000398' => 'pco', 'PRCOL_00003067' => 'pco', 'PRCOL_00005248' => 'pco', 'PRCOL_00006450' => 'pco', 'Prupe.1G085400' => 'ppe', 'Prupe.1G532800' => 'ppe', 'Prupe.3G238300' => 'ppe', 'Psat0s2718g0080' => 'psa', 'Psat3g206240' => 'psa', 'Psat5g046800' => 'psa', 'PSO063G1351' => 'pso', 'PSO170G4160' => 'pso', 'PSO541G2259' => 'pso', 'PSO541G5110' => 'pso', 'PSO566G0159' => 'pso', 'PSO782G4668' => 'pso', 'QL02p051854' => 'qlo', 'QL02p097801' => 'qlo', 'QL09p017878' => 'qlo', 'RcHm_v2.0_Chr1g0334331' => 'rch', 'RcHm_v2.0_Chr2g0162931' => 'rch', 'RcHm_v2.0_Chr4g0402381' => 'rch', 'RcHm_v2.0_Chr4g0402391' => 'rch', 'RcHm_v2.0_Chr4g0419591' => 'rch', 'RcHm_v2.0_Chr5g0020951' => 'rch', 'RcHm_v2.0_Chr6g0289681' => 'rch', 'RcHm_v2.0_Chr7g0226121' => 'rch', 'RcHm_v2.0_Chr7g0233891' => 'rch', 'RcHm_v2.0_Chr7g0235511' => 'rch', 'Rhsim01G0004300' => 'rsi', 'Rhsim02G0050700' => 'rsi', 'Rhsim03G0264500' => 'rsi', 'Rhsim07G0212200' => 'rsi', 'Sabra02G0083900' => 'sbr', 'Sabra04G0079000' => 'sbr', 'Sabra06G0129500' => 'sbr', 'Sabra18G0079200' => 'sbr', 'SalBow1G6327' => 'sbo', 'SalBow5G3175' => 'sbo', 'SalBow6G4447' => 'sbo', 'Sc11g0008260' => 'sci', 'Sc15g0002720' => 'sci', 'Sc18g0007490' => 'sci', 'Sed0012519' => 'sed', 'Sed0013601' => 'sed', 'Sed0019942' => 'sed', 'Sed0024465' => 'sed', 'Sed0028040' => 'sed', 'SEGI_04794' => 'sgi', 'SEGI_24969' => 'sgi', 'SEGI_26800' => 'sgi', 'SEGI_34770' => 'sgi', 'SEGI_38409' => 'sgi', 'SGA_v2.0_scaffold114G32024' => 'sas', 'SGA_v2.0_scaffold12G06070' => 'sas', 'SGA_v2.0_scaffold48G17826' => 'sas', 'SGA_v2.0_scaffold66G22448' => 'sas', 'SGA_v2.0_scaffold69G23252' => 'sas', 'SHI03727' => 'shi', 'SHI03729' => 'shi', 'SHI03732' => 'shi', 'SMO165G0009' => 'smo', 'SMO270G0091' => 'smo', 'SMO367G0652' => 'smo', 'SMO367G1106' => 'smo', 'Solyc02g085820.3' => 'sly', 'Solyc04g076380.4' => 'sly', 'Solyc07g019460.3' => 'sly', 'Sopen00g012550' => 'spe', 'Sopen02g030510' => 'spe', 'Sopen04g030140' => 'spe', 'Sopen07g007920' => 'spe', 'Sp3g01340' => 'spa', 'Sp7g22510' => 'spa', 'Sp7g22520' => 'spa', 'Sp7g28090' => 'spa', 'SpUn0657_0010' => 'spa', 'TAR183G0004' => 'tar', 'TAR314G0003' => 'tar', 'TAR371G1090' => 'tar', 'TAR371G1234' => 'tar', 'TAR381G0764' => 'tar', 'TAR383G0189' => 'tar', 'TAR615G0001' => 'tar', 'TAR625G0662' => 'tar', 'TAR628G0282' => 'tar', 'TAR629G0236' => 'tar', 'TAR636G1193' => 'tar', 'TAR726G0002' => 'tar', 'THA.LOC104799789' => 'tha', 'THA.LOC104801705' => 'tha', 'THA.LOC104803494' => 'tha', 'THA.LOC104803939' => 'tha', 'THA.LOC104806881' => 'tha', 'THA.LOC104819977' => 'tha', 'THA.LOC104820980' => 'tha', 'Thecc.08G071500' => 'tca', 'Thecc.09G177300' => 'tca', 'Thecc.09G259800' => 'tca', 'Thhalv10011322m.g' => 'esa', 'Thhalv10024546m.g' => 'esa', 'Thhalv10024568m.g' => 'esa', 'TPR.G1747' => 'tpr', 'TPR.G33419' => 'tpr', 'TPR.G5394' => 'tpr', 'TPR.G6360' => 'tpr', 'TPR.G9733' => 'tpr', 'TWI32G0568' => 'twi', 'TWI36G0344' => 'twi', 'TWI56G1361' => 'twi', 'TWI63G1242' => 'twi', 'TWI74G0592' => 'twi', 'unitig_21.g20650' => 'ugi', 'unitig_744.g24133' => 'ugi', 'unitig_744.g24134' => 'ugi', 'unitig_746.g26561' => 'ugi', 'unitig_899.g15472' => 'ugi', 'vmacro04647' => 'vma', 'vmacro04660' => 'vma', 'vmacro05566' => 'vma', 'vmacro06013' => 'vma', 'vmacro13126' => 'vma', 'VMungo1215G0106' => 'vmu', 'VMungo1309G0307' => 'vmu', 'VMungo1383G0137' => 'vmu', 'Zm00001eb010260' => 'zma', 'Zm00001eb040630' => 'zma', 'Zm00001eb040640' => 'zma', 'Zm00001eb067960' => 'zma', 'Zm00001eb152230' => 'zma', 'Zm00001eb154050' => 'zma', 'Zm00001eb178320' => 'zma', 'Zm00001eb184590' => 'zma', 'Zm00001eb320430' => 'zma', 'Zm00001eb351140' => 'zma', 'Zm00001eb414620' => 'zma', 'Zm00001eb414630' => 'zma', 'Zm00001eb432420' => 'zma', 'Zm00001eb432450' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001049', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001049' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001049', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '579', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001049' ) ), 'genes' => array( 'A01p07920' => 'bna', 'A01p15880' => 'bna', 'A01p15890' => 'bna', 'A01p22950' => 'bna', 'A01p37190' => 'bna', 'A03p32880' => 'bna', 'A03p55340' => 'bna', 'A03p59610' => 'bna', 'A05p32700' => 'bna', 'A08p19350' => 'bna', 'Aa31LG2G20320' => 'aar', 'Aa31LG4G9620' => 'aar', 'Aa31LG5G12810' => 'aar', 'Aa31LG8G15960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3817' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.439' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1703' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_340.441' => 'aag', 'Actinidia02749' => 'ach', 'Actinidia08191' => 'ach', 'Actinidia08192' => 'ach', 'Actinidia15878' => 'ach', 'Actinidia15879' => 'ach', 'Actinidia19245' => 'ach', 'Actinidia19628' => 'ach', 'Actinidia19831' => 'ach', 'Actinidia27012' => 'ach', 'Actinidia38634' => 'ach', 'Ah.01g008960' => 'amhyb', 'Ah.05g171320' => 'amhyb', 'Ah.09g229840' => 'amhyb', 'Ah.10g037600' => 'amhyb', 'Ah.14g083860' => 'amhyb', 'AL3G11560' => 'aly', 'AL777U10010' => 'aly', 'AL7G21940' => 'aly', 'AL7G28700' => 'aly', 'Aqoxy3G03945' => 'aox', 'Aqoxy6G00858' => 'aox', 'Aqoxy7G03051' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2XG0SD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQAG9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBV3FR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0I0E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPBB19' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXV5G1' => 'arhy', 'AT3G02280' => 'ath', 'AT3G24710' => 'ath', 'AT4G24520' => 'ath', 'AT4G30210' => 'ath', 'ATR0564G081' => 'atr', 'ATR0564G359' => 'atr', 'ATR0580G449' => 'atr', 'Atru.chr13.1005' => 'acertr', 'Atru.chr13.1275' => 'acertr', 'Atru.chr7.1178' => 'acertr', 'Atru.chr7.616' => 'acertr', 'AUR62008979' => 'cqu', 'AUR62014350' => 'cqu', 'AUR62014524' => 'cqu', 'AUR62019093' => 'cqu', 'AUR62021298' => 'cqu', 'AUR62033215' => 'cqu', 'AUR62043530' => 'cqu', 'BcaB01g02067' => 'bca', 'BcaB04g17099' => 'bca', 'BcaB06g26054' => 'bca', 'BcaB06g26057' => 'bca', 'BcaB07g33014' => 'bca', 'BcaB08g34532' => 'bca', 'BcaC01g01164' => 'bca', 'BcaC01g04452' => 'bca', 'BcaC01g04542' => 'bca', 'BcaC05g28232' => 'bca', 'BcaC05g28235' => 'bca', 'BcaC06g32879' => 'bca', 'BcaC07g37699' => 'bca', 'BcaC09g50859' => 'bca', 'BcaC09g50860' => 'bca', 'BcaC09g51804' => 'bca', 'BcaNung00530' => 'bca', 'BcaNung06311' => 'bca', 'BcaNung06377' => 'bca', 'BolC1t00875H' => 'bol', 'BolC1t01910H' => 'bol', 'BolC1t01911H' => 'bol', 'BolC3t16266H' => 'bol', 'BolC3t21192H' => 'bol', 'BolC3t21193H' => 'bol', 'BolC4t24578H' => 'bol', 'BolC5t33015H' => 'bol', 'BolC5t33017H' => 'bol', 'BolC7t45855H' => 'bol', 'BolC7t46229H' => 'bol', 'BolC8t47349H' => 'bol', 'BolC8t48085H' => 'bol', 'BraA01t00738Z' => 'bra', 'BraA01t01522Z' => 'bra', 'BraA01t01523Z' => 'bra', 'BraA01t03780Z' => 'bra', 'BraA03t12457Z' => 'bra', 'BraA03t14593Z' => 'bra', 'BraA03t15018Z' => 'bra', 'BraA08t33896Z' => 'bra', 'C01p08840' => 'bna', 'C01p19820' => 'bna', 'C01p19840' => 'bna', 'C03p40010' => 'bna', 'C03p88810' => 'bna', 'C05p42860' => 'bna', 'C07p53630' => 'bna', 'C07p57650' => 'bna', 'CAN.G1165.2' => 'can', 'CAN.G440.3' => 'can', 'CAN.G475.20' => 'can', 'CAN.G625.5' => 'can', 'CAN.G852.5' => 'can', 'CANSAT11G1186' => 'cansat', 'CANSAT25G1018' => 'cansat', 'CANSAT64G1724' => 'cansat', 'CARHR076240' => 'chi', 'CARHR231910' => 'chi', 'CARHR231920' => 'chi', 'CARHR238120' => 'chi', 'CARHR246570' => 'chi', 'Carub.0003s0139' => 'cru', 'Carub.0003s2478' => 'cru', 'Carub.0007s1040' => 'cru', 'Carub.0007s1655' => 'cru', 'Ca_01353_v3' => 'car', 'Ca_04065_v3' => 'car', 'Ca_21228_v3' => 'car', 'Ca_23435_v3' => 'car', 'CBR_g45849' => 'cbr', 'CBR_g66801' => 'cbr', 'CBR_g76440' => 'cbr', 'Cc06_g13220' => 'ccan', 'Cc07_g08880' => 'ccan', 'Cc10_g15930' => 'ccan', 'CDE02G0228' => 'cde', 'CDE04G0722' => 'cde', 'CDE04G2168' => 'cde', 'CDE05G0709' => 'cde', 'CDE05G0754' => 'cde', 'CDE05G1223' => 'cde', 'CDE05G2069' => 'cde', 'CDE05G2137' => 'cde', 'CDE05G2905' => 'cde', 'CDE07G0189' => 'cde', 'Cfa013502' => 'cfa', 'Cfa013801' => 'cfa', 'Cfa022576' => 'cfa', 'Cfa023262' => 'cfa', 'Cfa023480' => 'cfa', 'Ciclev10000469m.g' => 'ccl', 'Ciclev10000583m.g' => 'ccl', 'Ciclev10007535m.g' => 'ccl', 'CiPaw.04G041100' => 'cil', 'CiPaw.07G192400' => 'cil', 'CiPaw.08G036100' => 'cil', 'CiPaw.08G055900' => 'cil', 'ClCG06G013360' => 'cla', 'ClCG07G017080' => 'cla', 'ClCG11G012150' => 'cla', 'COL.COLO4_25241' => 'col', 'COL.COLO4_25242' => 'col', 'COL.COLO4_35252' => 'col', 'COL.COLO4_37704' => 'col', 'Cpa.g.c29936.1' => 'cpa', 'Cpa.g.sc179.4' => 'cpa', 'Cpa.g.sc21.27' => 'cpa', 'Cpa.g.sc233.8' => 'cpa', 'Cre01.g039350' => 'cre', 'Cre03.g180300' => 'cre', 'Cre12.g551850' => 'cre', 'Cre16.g683550' => 'cre', 'CsaV3_1G031610' => 'csa', 'CsaV3_2G008410' => 'csa', 'CsaV3_4G004300' => 'csa', 'CSS0024879' => 'camsi', 'CSS0032537' => 'camsi', 'CSS0037498' => 'camsi', 'CSS0043035' => 'camsi', 'CSS0049553' => 'camsi', 'DCAR_014700' => 'dca', 'DCAR_017970' => 'dca', 'DCAR_019602' => 'dca', 'DCAR_020124' => 'dca', 'DCAR_029529' => 'dca', 'DCAR_029530' => 'dca', 'Dinv34836' => 'din', 'Dinv41245' => 'din', 'Dinv42608' => 'din', 'Dinv42720' => 'din', 'Dinv43381' => 'din', 'Dinv44863' => 'din', 'Duzib041G0510' => 'dzi', 'Duzib093G0120' => 'dzi', 'Duzib150G0039' => 'dzi', 'Duzib150G1377' => 'dzi', 'Duzib168G0135' => 'dzi', 'Duzib170G0377' => 'dzi', 'ECA234G4507' => 'eca', 'ECA236G0274' => 'eca', 'ECA236G3859' => 'eca', 'ECA238G2427' => 'eca', 'ECA240G1318' => 'eca', 'EL10Ac1g00992' => 'bvu', 'EL10Ac2g04590' => 'bvu', 'EL10Ac8g18281' => 'bvu', 'Eucgr.C00154' => 'egr', 'Eucgr.C02330' => 'egr', 'Eucgr.J01497' => 'egr', 'FAN01G0915' => 'fan', 'FAN02G0215' => 'fan', 'FAN03G1095' => 'fan', 'FAN04G0104' => 'fan', 'FAN05G1438' => 'fan', 'FAN07G2539' => 'fan', 'FAN08G0165' => 'fan', 'FAN09G1302' => 'fan', 'FAN10G0721' => 'fan', 'FAN11G1854' => 'fan', 'FAN12G1664' => 'fan', 'FAN13G3329' => 'fan', 'FAN14G1155' => 'fan', 'FAN14G2476' => 'fan', 'FAN17G0476' => 'fan', 'FAN18G0905' => 'fan', 'FAN18G0950' => 'fan', 'FAN19G0265' => 'fan', 'FAN22G1504' => 'fan', 'FvH4_1g29080' => 'fve', 'FvH4_3g26990' => 'fve', 'FvH4_4g08180' => 'fve', 'FvH4_5g10660' => 'fve', 'FvH4_5g34830' => 'fve', 'FvH4_6g45220' => 'fve', 'FvH4_7g05330' => 'fve', 'FvH4_7g05331' => 'fve', 'Glyma.02G160251' => 'gma', 'Glyma.02G214700' => 'gma', 'Glyma.04G095500' => 'gma', 'Glyma.06G097200' => 'gma', 'Glyma.08G364302' => 'gma', 'Glyma.13G096500' => 'gma', 'Glyma.14G182100' => 'gma', 'Glyma.17G063000' => 'gma', 'Glyma.18G297800' => 'gma', 'Gohir.A01G126300' => 'ghi', 'Gohir.A05G004900' => 'ghi', 'Gohir.A05G219300' => 'ghi', 'Gohir.A05G360900' => 'ghi', 'Gohir.A07G116600' => 'ghi', 'Gohir.A08G023216' => 'ghi', 'Gohir.A08G023408' => 'ghi', 'Gohir.A08G023416' => 'ghi', 'Gohir.D01G113900' => 'ghi', 'Gohir.D04G100432' => 'ghi', 'Gohir.D04G111100' => 'ghi', 'Gohir.D05G005800' => 'ghi', 'Gohir.D05G221900' => 'ghi', 'Gohir.D07G121000' => 'ghi', 'Gohir.D08G034000' => 'ghi', 'Gohir.D08G111608' => 'ghi', 'Gohir.D10G139266' => 'ghi', 'Gohir.D11G131600' => 'ghi', 'Gohir.D11G228980' => 'ghi', 'Gorai.001G130600' => 'gra', 'Gorai.002G138900' => 'gra', 'Gorai.004G031600' => 'gra', 'Gorai.004G119600' => 'gra', 'Gorai.006G045500' => 'gra', 'Gorai.009G005600' => 'gra', 'Gorai.009G229300' => 'gra', 'GSVIVG01009185001' => 'vvi', 'GSVIVG01014384001' => 'vvi', 'GSVIVG01014385001' => 'vvi', 'GSVIVG01029213001' => 'vvi', 'GSVIVG01031054001' => 'vvi', 'HanXRQChr02g0034591' => 'han', 'HanXRQChr05g0142991' => 'han', 'HanXRQChr09g0244761' => 'han', 'HanXRQChr09g0254451' => 'han', 'HanXRQChr09g0255411' => 'han', 'HanXRQChr12g0358291' => 'han', 'HanXRQChr12g0358301' => 'han', 'HanXRQChr12g0365411' => 'han', 'HanXRQChr12g0376471' => 'han', 'HanXRQChr13g0412341' => 'han', 'HanXRQChr14g0429191' => 'han', 'Haze_22094' => 'cav', 'Haze_22464' => 'cav', 'Hma1.2p1_0125F.1_g058820' => 'hma', 'Hma1.2p1_0550F.1_g177330' => 'hma', 'Hma1.2p1_1025F.1_g249330' => 'hma', 'Hma1.2p1_3581F.1_g336840' => 'hma', 'HPP92_003525' => 'vpl', 'HPP92_005481' => 'vpl', 'HPP92_010748' => 'vpl', 'HPP92_015367' => 'vpl', 'HPP92_018334' => 'vpl', 'HPP92_018376' => 'vpl', 'Hund01739' => 'sun', 'Hund09029' => 'sun', 'Hund13726' => 'sun', 'Hund17286' => 'sun', 'Hund26351' => 'sun', 'Hund26816' => 'sun', 'Lalb_Chr04g0252811' => 'lal', 'Lalb_Chr07g0180491' => 'lal', 'Lalb_Chr08g0242561' => 'lal', 'Lalb_Chr10g0091161' => 'lal', 'Lalb_Chr11g0064941' => 'lal', 'Lalb_Chr12g0199431' => 'lal', 'Lj1g0009282' => 'lja', 'Lj1g0012839' => 'lja', 'Lj1g0028233' => 'lja', 'Lj4C194T12' => 'lonja', 'Lj4C717G5' => 'lonja', 'Lj4C738G5' => 'lonja', 'Lj4g0000806' => 'lja', 'Lj4g0009595' => 'lja', 'Lj5A7T12' => 'lonja', 'Lj6g0008823' => 'lja', 'Lj6g0018247' => 'lja', 'Lj9A24T28' => 'lonja', 'Lj9C26T2' => 'lonja', 'Lsat_1_v5_gn_0_21360' => 'lsa', 'Lsat_1_v5_gn_2_110721' => 'lsa', 'Lsat_1_v5_gn_2_110801' => 'lsa', 'Lsat_1_v5_gn_2_9800' => 'lsa', 'Lsat_1_v5_gn_3_129101' => 'lsa', 'Lsat_1_v5_gn_3_81881' => 'lsa', 'Lsat_1_v5_gn_5_79581' => 'lsa', 'Lsat_1_v5_gn_5_85441' => 'lsa', 'Lsat_1_v5_gn_6_70320' => 'lsa', 'Lsat_1_v5_gn_6_72241' => 'lsa', 'Lsat_1_v5_gn_7_115600' => 'lsa', 'Lsat_1_v5_gn_7_54581' => 'lsa', 'Lsat_1_v5_gn_8_1281' => 'lsa', 'Lsat_1_v5_gn_8_67661' => 'lsa', 'Lsat_1_v5_gn_9_32960' => 'lsa', 'Lsat_1_v5_gn_9_87640' => 'lsa', 'Lsat_1_v5_gn_9_87680' => 'lsa', 'Manes.01G109200' => 'mes', 'Manes.14G154000' => 'mes', 'Manes.18G058100' => 'mes', 'Manes.18G058200' => 'mes', 'Mapoly0012s0011' => 'mpo', 'Mapoly0159s0022' => 'mpo', 'MBI04_g11121_MAGBIO' => 'mbi', 'MBI14_g17372_MAGBIO' => 'mbi', 'MBI15_g39956_MAGBIO' => 'mbi', 'MBI16_g27571_MAGBIO' => 'mbi', 'MBI16_g39836_MAGBIO' => 'mbi', 'MBI19_g21647_MAGBIO' => 'mbi', 'MBI19_g21649_MAGBIO' => 'mbi', 'MBI19_g21650_MAGBIO' => 'mbi', 'MCO01G527' => 'mco', 'MCO02G064' => 'mco', 'MCO06G260' => 'mco', 'MD08G1199100' => 'mdo', 'MD09G1086400' => 'mdo', 'MD09G1086700' => 'mdo', 'MD09G1087200' => 'mdo', 'MD12G1122800' => 'mdo', 'MD13G1253300' => 'mdo', 'MD15G1386100' => 'mdo', 'MD16G1257600' => 'mdo', 'Medtr1g102950' => 'mtr', 'Medtr3g100160' => 'mtr', 'Medtr4g128020' => 'mtr', 'Medtr7g101180' => 'mtr', 'Medtr7g406970' => 'mtr', 'MELO3C004023.2' => 'cme', 'MELO3C017461.2' => 'cme', 'MELO3C017636.2' => 'cme', 'Migut.J01483' => 'egut', 'Migut.K00241' => 'egut', 'Migut.L00308' => 'egut', 'Migut.N02860' => 'egut', 'MSTRG.10739' => 'ama', 'MSTRG.19708' => 'ama', 'MSTRG.24430' => 'ama', 'MSTRG.6220' => 'ama', 'Nitab4.5_0000131g0220' => 'nta', 'Nitab4.5_0000455g0070' => 'nta', 'Nitab4.5_0001569g0100' => 'nta', 'Nitab4.5_0001972g0020' => 'nta', 'Nitab4.5_0004944g0040' => 'nta', 'Nitab4.5_0005199g0010' => 'nta', 'Nitab4.5_0005913g0030' => 'nta', 'Nn1g05589' => 'nnu', 'Nn2g12771' => 'nnu', 'Nn3g17797' => 'nnu', 'Nn5g29378' => 'nnu', 'Nn5g29871' => 'nnu', 'Nn6g35206' => 'nnu', 'Nn7g37415' => 'nnu', 'Nn8g40480' => 'nnu', 'Oeu009850.1' => 'oeu', 'Oeu012755.1' => 'oeu', 'Oeu025212.1' => 'oeu', 'Oeu033941.2' => 'oeu', 'Oeu042169.1' => 'oeu', 'Oeu044321.1' => 'oeu', 'Oeu056511.1' => 'oeu', 'Oeu064372.1' => 'oeu', 'Os01g0733600' => 'osa', 'Os04g0653400' => 'osa', 'Os07g0496600' => 'osa', 'Os08g0243500' => 'osa', 'Os09g0558900' => 'osa', 'Peaxi162Scf00231g00617' => 'pax', 'Peaxi162Scf00454g00327' => 'pax', 'Peaxi162Scf00814g00241' => 'pax', 'PGR042G0664' => 'pgr', 'PGR042G3763' => 'pgr', 'PGR044G1953' => 'pgr', 'PGSC0003DMG400009340' => 'stu', 'PGSC0003DMG400012672' => 'stu', 'PGSC0003DMG400013779' => 'stu', 'Phvul.003G145400' => 'pvu', 'Phvul.008G004800' => 'pvu', 'Phvul.008G182200' => 'pvu', 'Phvul.009G036200' => 'pvu', 'Potri.002G106566' => 'ptr', 'Potri.002G106632' => 'ptr', 'Potri.004G101100' => 'ptr', 'Potri.005G153800' => 'ptr', 'Potri.006G167200' => 'ptr', 'Potri.011G027100' => 'ptr', 'Potri.018G092100' => 'ptr', 'Pp3c14_22890' => 'ppa', 'Pp3c17_22110' => 'ppa', 'Pp3c20_9680' => 'ppa', 'Pp3c24_17560' => 'ppa', 'Pp3c8_19940' => 'ppa', 'Pp3c9_18000' => 'ppa', 'PRCOL_00000398' => 'pco', 'PRCOL_00003067' => 'pco', 'PRCOL_00005248' => 'pco', 'PRCOL_00006450' => 'pco', 'Prupe.1G085400' => 'ppe', 'Prupe.1G532800' => 'ppe', 'Prupe.3G238300' => 'ppe', 'Psat0s2718g0080' => 'psa', 'Psat3g206240' => 'psa', 'Psat5g046800' => 'psa', 'PSO063G1351' => 'pso', 'PSO170G4160' => 'pso', 'PSO541G2259' => 'pso', 'PSO541G5110' => 'pso', 'PSO566G0159' => 'pso', 'PSO782G4668' => 'pso', 'QL02p051854' => 'qlo', 'QL02p097801' => 'qlo', 'QL09p017878' => 'qlo', 'RcHm_v2.0_Chr1g0334331' => 'rch', 'RcHm_v2.0_Chr2g0162931' => 'rch', 'RcHm_v2.0_Chr4g0402381' => 'rch', 'RcHm_v2.0_Chr4g0402391' => 'rch', 'RcHm_v2.0_Chr4g0419591' => 'rch', 'RcHm_v2.0_Chr5g0020951' => 'rch', 'RcHm_v2.0_Chr6g0289681' => 'rch', 'RcHm_v2.0_Chr7g0226121' => 'rch', 'RcHm_v2.0_Chr7g0233891' => 'rch', 'RcHm_v2.0_Chr7g0235511' => 'rch', 'Rhsim01G0004300' => 'rsi', 'Rhsim02G0050700' => 'rsi', 'Rhsim03G0264500' => 'rsi', 'Rhsim07G0212200' => 'rsi', 'Sabra02G0083900' => 'sbr', 'Sabra04G0079000' => 'sbr', 'Sabra06G0129500' => 'sbr', 'Sabra18G0079200' => 'sbr', 'SalBow1G6327' => 'sbo', 'SalBow5G3175' => 'sbo', 'SalBow6G4447' => 'sbo', 'Sc11g0008260' => 'sci', 'Sc15g0002720' => 'sci', 'Sc18g0007490' => 'sci', 'Sed0012519' => 'sed', 'Sed0013601' => 'sed', 'Sed0019942' => 'sed', 'Sed0024465' => 'sed', 'Sed0028040' => 'sed', 'SEGI_04794' => 'sgi', 'SEGI_24969' => 'sgi', 'SEGI_26800' => 'sgi', 'SEGI_34770' => 'sgi', 'SEGI_38409' => 'sgi', 'SGA_v2.0_scaffold114G32024' => 'sas', 'SGA_v2.0_scaffold12G06070' => 'sas', 'SGA_v2.0_scaffold48G17826' => 'sas', 'SGA_v2.0_scaffold66G22448' => 'sas', 'SGA_v2.0_scaffold69G23252' => 'sas', 'SHI03727' => 'shi', 'SHI03729' => 'shi', 'SHI03732' => 'shi', 'SMO165G0009' => 'smo', 'SMO270G0091' => 'smo', 'SMO367G0652' => 'smo', 'SMO367G1106' => 'smo', 'Solyc02g085820.3' => 'sly', 'Solyc04g076380.4' => 'sly', 'Solyc07g019460.3' => 'sly', 'Sopen00g012550' => 'spe', 'Sopen02g030510' => 'spe', 'Sopen04g030140' => 'spe', 'Sopen07g007920' => 'spe', 'Sp3g01340' => 'spa', 'Sp7g22510' => 'spa', 'Sp7g22520' => 'spa', 'Sp7g28090' => 'spa', 'SpUn0657_0010' => 'spa', 'TAR183G0004' => 'tar', 'TAR314G0003' => 'tar', 'TAR371G1090' => 'tar', 'TAR371G1234' => 'tar', 'TAR381G0764' => 'tar', 'TAR383G0189' => 'tar', 'TAR615G0001' => 'tar', 'TAR625G0662' => 'tar', 'TAR628G0282' => 'tar', 'TAR629G0236' => 'tar', 'TAR636G1193' => 'tar', 'TAR726G0002' => 'tar', 'THA.LOC104799789' => 'tha', 'THA.LOC104801705' => 'tha', 'THA.LOC104803494' => 'tha', 'THA.LOC104803939' => 'tha', 'THA.LOC104806881' => 'tha', 'THA.LOC104819977' => 'tha', 'THA.LOC104820980' => 'tha', 'Thecc.08G071500' => 'tca', 'Thecc.09G177300' => 'tca', 'Thecc.09G259800' => 'tca', 'Thhalv10011322m.g' => 'esa', 'Thhalv10024546m.g' => 'esa', 'Thhalv10024568m.g' => 'esa', 'TPR.G1747' => 'tpr', 'TPR.G33419' => 'tpr', 'TPR.G5394' => 'tpr', 'TPR.G6360' => 'tpr', 'TPR.G9733' => 'tpr', 'TWI32G0568' => 'twi', 'TWI36G0344' => 'twi', 'TWI56G1361' => 'twi', 'TWI63G1242' => 'twi', 'TWI74G0592' => 'twi', 'unitig_21.g20650' => 'ugi', 'unitig_744.g24133' => 'ugi', 'unitig_744.g24134' => 'ugi', 'unitig_746.g26561' => 'ugi', 'unitig_899.g15472' => 'ugi', 'vmacro04647' => 'vma', 'vmacro04660' => 'vma', 'vmacro05566' => 'vma', 'vmacro06013' => 'vma', 'vmacro13126' => 'vma', 'VMungo1215G0106' => 'vmu', 'VMungo1309G0307' => 'vmu', 'VMungo1383G0137' => 'vmu', 'Zm00001eb010260' => 'zma', 'Zm00001eb040630' => 'zma', 'Zm00001eb040640' => 'zma', 'Zm00001eb067960' => 'zma', 'Zm00001eb152230' => 'zma', 'Zm00001eb154050' => 'zma', 'Zm00001eb178320' => 'zma', 'Zm00001eb184590' => 'zma', 'Zm00001eb320430' => 'zma', 'Zm00001eb351140' => 'zma', 'Zm00001eb414620' => 'zma', 'Zm00001eb414630' => 'zma', 'Zm00001eb432420' => 'zma', 'Zm00001eb432450' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001049' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001049' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001049' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001049' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001049', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '579', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p07920' => 'bna', 'A01p15880' => 'bna', 'A01p15890' => 'bna', 'A01p22950' => 'bna', 'A01p37190' => 'bna', 'A03p32880' => 'bna', 'A03p55340' => 'bna', 'A03p59610' => 'bna', 'A05p32700' => 'bna', 'A08p19350' => 'bna', 'Aa31LG2G20320' => 'aar', 'Aa31LG4G9620' => 'aar', 'Aa31LG5G12810' => 'aar', 'Aa31LG8G15960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3817' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.439' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1703' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_340.441' => 'aag', 'Actinidia02749' => 'ach', 'Actinidia08191' => 'ach', 'Actinidia08192' => 'ach', 'Actinidia15878' => 'ach', 'Actinidia15879' => 'ach', 'Actinidia19245' => 'ach', 'Actinidia19628' => 'ach', 'Actinidia19831' => 'ach', 'Actinidia27012' => 'ach', 'Actinidia38634' => 'ach', 'Ah.01g008960' => 'amhyb', 'Ah.05g171320' => 'amhyb', 'Ah.09g229840' => 'amhyb', 'Ah.10g037600' => 'amhyb', 'Ah.14g083860' => 'amhyb', 'AL3G11560' => 'aly', 'AL777U10010' => 'aly', 'AL7G21940' => 'aly', 'AL7G28700' => 'aly', 'Aqoxy3G03945' => 'aox', 'Aqoxy6G00858' => 'aox', 'Aqoxy7G03051' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2XG0SD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQAG9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBV3FR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0I0E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPBB19' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXV5G1' => 'arhy', 'AT3G02280' => 'ath', 'AT3G24710' => 'ath', 'AT4G24520' => 'ath', 'AT4G30210' => 'ath', 'ATR0564G081' => 'atr', 'ATR0564G359' => 'atr', 'ATR0580G449' => 'atr', 'Atru.chr13.1005' => 'acertr', 'Atru.chr13.1275' => 'acertr', 'Atru.chr7.1178' => 'acertr', 'Atru.chr7.616' => 'acertr', 'AUR62008979' => 'cqu', 'AUR62014350' => 'cqu', 'AUR62014524' => 'cqu', 'AUR62019093' => 'cqu', 'AUR62021298' => 'cqu', 'AUR62033215' => 'cqu', 'AUR62043530' => 'cqu', 'BcaB01g02067' => 'bca', 'BcaB04g17099' => 'bca', 'BcaB06g26054' => 'bca', 'BcaB06g26057' => 'bca', 'BcaB07g33014' => 'bca', 'BcaB08g34532' => 'bca', 'BcaC01g01164' => 'bca', 'BcaC01g04452' => 'bca', 'BcaC01g04542' => 'bca', 'BcaC05g28232' => 'bca', 'BcaC05g28235' => 'bca', 'BcaC06g32879' => 'bca', 'BcaC07g37699' => 'bca', 'BcaC09g50859' => 'bca', 'BcaC09g50860' => 'bca', 'BcaC09g51804' => 'bca', 'BcaNung00530' => 'bca', 'BcaNung06311' => 'bca', 'BcaNung06377' => 'bca', 'BolC1t00875H' => 'bol', 'BolC1t01910H' => 'bol', 'BolC1t01911H' => 'bol', 'BolC3t16266H' => 'bol', 'BolC3t21192H' => 'bol', 'BolC3t21193H' => 'bol', 'BolC4t24578H' => 'bol', 'BolC5t33015H' => 'bol', 'BolC5t33017H' => 'bol', 'BolC7t45855H' => 'bol', 'BolC7t46229H' => 'bol', 'BolC8t47349H' => 'bol', 'BolC8t48085H' => 'bol', 'BraA01t00738Z' => 'bra', 'BraA01t01522Z' => 'bra', 'BraA01t01523Z' => 'bra', 'BraA01t03780Z' => 'bra', 'BraA03t12457Z' => 'bra', 'BraA03t14593Z' => 'bra', 'BraA03t15018Z' => 'bra', 'BraA08t33896Z' => 'bra', 'C01p08840' => 'bna', 'C01p19820' => 'bna', 'C01p19840' => 'bna', 'C03p40010' => 'bna', 'C03p88810' => 'bna', 'C05p42860' => 'bna', 'C07p53630' => 'bna', 'C07p57650' => 'bna', 'CAN.G1165.2' => 'can', 'CAN.G440.3' => 'can', 'CAN.G475.20' => 'can', 'CAN.G625.5' => 'can', 'CAN.G852.5' => 'can', 'CANSAT11G1186' => 'cansat', 'CANSAT25G1018' => 'cansat', 'CANSAT64G1724' => 'cansat', 'CARHR076240' => 'chi', 'CARHR231910' => 'chi', 'CARHR231920' => 'chi', 'CARHR238120' => 'chi', 'CARHR246570' => 'chi', 'Carub.0003s0139' => 'cru', 'Carub.0003s2478' => 'cru', 'Carub.0007s1040' => 'cru', 'Carub.0007s1655' => 'cru', 'Ca_01353_v3' => 'car', 'Ca_04065_v3' => 'car', 'Ca_21228_v3' => 'car', 'Ca_23435_v3' => 'car', 'CBR_g45849' => 'cbr', 'CBR_g66801' => 'cbr', 'CBR_g76440' => 'cbr', 'Cc06_g13220' => 'ccan', 'Cc07_g08880' => 'ccan', 'Cc10_g15930' => 'ccan', 'CDE02G0228' => 'cde', 'CDE04G0722' => 'cde', 'CDE04G2168' => 'cde', 'CDE05G0709' => 'cde', 'CDE05G0754' => 'cde', 'CDE05G1223' => 'cde', 'CDE05G2069' => 'cde', 'CDE05G2137' => 'cde', 'CDE05G2905' => 'cde', 'CDE07G0189' => 'cde', 'Cfa013502' => 'cfa', 'Cfa013801' => 'cfa', 'Cfa022576' => 'cfa', 'Cfa023262' => 'cfa', 'Cfa023480' => 'cfa', 'Ciclev10000469m.g' => 'ccl', 'Ciclev10000583m.g' => 'ccl', 'Ciclev10007535m.g' => 'ccl', 'CiPaw.04G041100' => 'cil', 'CiPaw.07G192400' => 'cil', 'CiPaw.08G036100' => 'cil', 'CiPaw.08G055900' => 'cil', 'ClCG06G013360' => 'cla', 'ClCG07G017080' => 'cla', 'ClCG11G012150' => 'cla', 'COL.COLO4_25241' => 'col', 'COL.COLO4_25242' => 'col', 'COL.COLO4_35252' => 'col', 'COL.COLO4_37704' => 'col', 'Cpa.g.c29936.1' => 'cpa', 'Cpa.g.sc179.4' => 'cpa', 'Cpa.g.sc21.27' => 'cpa', 'Cpa.g.sc233.8' => 'cpa', 'Cre01.g039350' => 'cre', 'Cre03.g180300' => 'cre', 'Cre12.g551850' => 'cre', 'Cre16.g683550' => 'cre', 'CsaV3_1G031610' => 'csa', 'CsaV3_2G008410' => 'csa', 'CsaV3_4G004300' => 'csa', 'CSS0024879' => 'camsi', 'CSS0032537' => 'camsi', 'CSS0037498' => 'camsi', 'CSS0043035' => 'camsi', 'CSS0049553' => 'camsi', 'DCAR_014700' => 'dca', 'DCAR_017970' => 'dca', 'DCAR_019602' => 'dca', 'DCAR_020124' => 'dca', 'DCAR_029529' => 'dca', 'DCAR_029530' => 'dca', 'Dinv34836' => 'din', 'Dinv41245' => 'din', 'Dinv42608' => 'din', 'Dinv42720' => 'din', 'Dinv43381' => 'din', 'Dinv44863' => 'din', 'Duzib041G0510' => 'dzi', 'Duzib093G0120' => 'dzi', 'Duzib150G0039' => 'dzi', 'Duzib150G1377' => 'dzi', 'Duzib168G0135' => 'dzi', 'Duzib170G0377' => 'dzi', 'ECA234G4507' => 'eca', 'ECA236G0274' => 'eca', 'ECA236G3859' => 'eca', 'ECA238G2427' => 'eca', 'ECA240G1318' => 'eca', 'EL10Ac1g00992' => 'bvu', 'EL10Ac2g04590' => 'bvu', 'EL10Ac8g18281' => 'bvu', 'Eucgr.C00154' => 'egr', 'Eucgr.C02330' => 'egr', 'Eucgr.J01497' => 'egr', 'FAN01G0915' => 'fan', 'FAN02G0215' => 'fan', 'FAN03G1095' => 'fan', 'FAN04G0104' => 'fan', 'FAN05G1438' => 'fan', 'FAN07G2539' => 'fan', 'FAN08G0165' => 'fan', 'FAN09G1302' => 'fan', 'FAN10G0721' => 'fan', 'FAN11G1854' => 'fan', 'FAN12G1664' => 'fan', 'FAN13G3329' => 'fan', 'FAN14G1155' => 'fan', 'FAN14G2476' => 'fan', 'FAN17G0476' => 'fan', 'FAN18G0905' => 'fan', 'FAN18G0950' => 'fan', 'FAN19G0265' => 'fan', 'FAN22G1504' => 'fan', 'FvH4_1g29080' => 'fve', 'FvH4_3g26990' => 'fve', 'FvH4_4g08180' => 'fve', 'FvH4_5g10660' => 'fve', 'FvH4_5g34830' => 'fve', 'FvH4_6g45220' => 'fve', 'FvH4_7g05330' => 'fve', 'FvH4_7g05331' => 'fve', 'Glyma.02G160251' => 'gma', 'Glyma.02G214700' => 'gma', 'Glyma.04G095500' => 'gma', 'Glyma.06G097200' => 'gma', 'Glyma.08G364302' => 'gma', 'Glyma.13G096500' => 'gma', 'Glyma.14G182100' => 'gma', 'Glyma.17G063000' => 'gma', 'Glyma.18G297800' => 'gma', 'Gohir.A01G126300' => 'ghi', 'Gohir.A05G004900' => 'ghi', 'Gohir.A05G219300' => 'ghi', 'Gohir.A05G360900' => 'ghi', 'Gohir.A07G116600' => 'ghi', 'Gohir.A08G023216' => 'ghi', 'Gohir.A08G023408' => 'ghi', 'Gohir.A08G023416' => 'ghi', 'Gohir.D01G113900' => 'ghi', 'Gohir.D04G100432' => 'ghi', 'Gohir.D04G111100' => 'ghi', 'Gohir.D05G005800' => 'ghi', 'Gohir.D05G221900' => 'ghi', 'Gohir.D07G121000' => 'ghi', 'Gohir.D08G034000' => 'ghi', 'Gohir.D08G111608' => 'ghi', 'Gohir.D10G139266' => 'ghi', 'Gohir.D11G131600' => 'ghi', 'Gohir.D11G228980' => 'ghi', 'Gorai.001G130600' => 'gra', 'Gorai.002G138900' => 'gra', 'Gorai.004G031600' => 'gra', 'Gorai.004G119600' => 'gra', 'Gorai.006G045500' => 'gra', 'Gorai.009G005600' => 'gra', 'Gorai.009G229300' => 'gra', 'GSVIVG01009185001' => 'vvi', 'GSVIVG01014384001' => 'vvi', 'GSVIVG01014385001' => 'vvi', 'GSVIVG01029213001' => 'vvi', 'GSVIVG01031054001' => 'vvi', 'HanXRQChr02g0034591' => 'han', 'HanXRQChr05g0142991' => 'han', 'HanXRQChr09g0244761' => 'han', 'HanXRQChr09g0254451' => 'han', 'HanXRQChr09g0255411' => 'han', 'HanXRQChr12g0358291' => 'han', 'HanXRQChr12g0358301' => 'han', 'HanXRQChr12g0365411' => 'han', 'HanXRQChr12g0376471' => 'han', 'HanXRQChr13g0412341' => 'han', 'HanXRQChr14g0429191' => 'han', 'Haze_22094' => 'cav', 'Haze_22464' => 'cav', 'Hma1.2p1_0125F.1_g058820' => 'hma', 'Hma1.2p1_0550F.1_g177330' => 'hma', 'Hma1.2p1_1025F.1_g249330' => 'hma', 'Hma1.2p1_3581F.1_g336840' => 'hma', 'HPP92_003525' => 'vpl', 'HPP92_005481' => 'vpl', 'HPP92_010748' => 'vpl', 'HPP92_015367' => 'vpl', 'HPP92_018334' => 'vpl', 'HPP92_018376' => 'vpl', 'Hund01739' => 'sun', 'Hund09029' => 'sun', 'Hund13726' => 'sun', 'Hund17286' => 'sun', 'Hund26351' => 'sun', 'Hund26816' => 'sun', 'Lalb_Chr04g0252811' => 'lal', 'Lalb_Chr07g0180491' => 'lal', 'Lalb_Chr08g0242561' => 'lal', 'Lalb_Chr10g0091161' => 'lal', 'Lalb_Chr11g0064941' => 'lal', 'Lalb_Chr12g0199431' => 'lal', 'Lj1g0009282' => 'lja', 'Lj1g0012839' => 'lja', 'Lj1g0028233' => 'lja', 'Lj4C194T12' => 'lonja', 'Lj4C717G5' => 'lonja', 'Lj4C738G5' => 'lonja', 'Lj4g0000806' => 'lja', 'Lj4g0009595' => 'lja', 'Lj5A7T12' => 'lonja', 'Lj6g0008823' => 'lja', 'Lj6g0018247' => 'lja', 'Lj9A24T28' => 'lonja', 'Lj9C26T2' => 'lonja', 'Lsat_1_v5_gn_0_21360' => 'lsa', 'Lsat_1_v5_gn_2_110721' => 'lsa', 'Lsat_1_v5_gn_2_110801' => 'lsa', 'Lsat_1_v5_gn_2_9800' => 'lsa', 'Lsat_1_v5_gn_3_129101' => 'lsa', 'Lsat_1_v5_gn_3_81881' => 'lsa', 'Lsat_1_v5_gn_5_79581' => 'lsa', 'Lsat_1_v5_gn_5_85441' => 'lsa', 'Lsat_1_v5_gn_6_70320' => 'lsa', 'Lsat_1_v5_gn_6_72241' => 'lsa', 'Lsat_1_v5_gn_7_115600' => 'lsa', 'Lsat_1_v5_gn_7_54581' => 'lsa', 'Lsat_1_v5_gn_8_1281' => 'lsa', 'Lsat_1_v5_gn_8_67661' => 'lsa', 'Lsat_1_v5_gn_9_32960' => 'lsa', 'Lsat_1_v5_gn_9_87640' => 'lsa', 'Lsat_1_v5_gn_9_87680' => 'lsa', 'Manes.01G109200' => 'mes', 'Manes.14G154000' => 'mes', 'Manes.18G058100' => 'mes', 'Manes.18G058200' => 'mes', 'Mapoly0012s0011' => 'mpo', 'Mapoly0159s0022' => 'mpo', 'MBI04_g11121_MAGBIO' => 'mbi', 'MBI14_g17372_MAGBIO' => 'mbi', 'MBI15_g39956_MAGBIO' => 'mbi', 'MBI16_g27571_MAGBIO' => 'mbi', 'MBI16_g39836_MAGBIO' => 'mbi', 'MBI19_g21647_MAGBIO' => 'mbi', 'MBI19_g21649_MAGBIO' => 'mbi', 'MBI19_g21650_MAGBIO' => 'mbi', 'MCO01G527' => 'mco', 'MCO02G064' => 'mco', 'MCO06G260' => 'mco', 'MD08G1199100' => 'mdo', 'MD09G1086400' => 'mdo', 'MD09G1086700' => 'mdo', 'MD09G1087200' => 'mdo', 'MD12G1122800' => 'mdo', 'MD13G1253300' => 'mdo', 'MD15G1386100' => 'mdo', 'MD16G1257600' => 'mdo', 'Medtr1g102950' => 'mtr', 'Medtr3g100160' => 'mtr', 'Medtr4g128020' => 'mtr', 'Medtr7g101180' => 'mtr', 'Medtr7g406970' => 'mtr', 'MELO3C004023.2' => 'cme', 'MELO3C017461.2' => 'cme', 'MELO3C017636.2' => 'cme', 'Migut.J01483' => 'egut', 'Migut.K00241' => 'egut', 'Migut.L00308' => 'egut', 'Migut.N02860' => 'egut', 'MSTRG.10739' => 'ama', 'MSTRG.19708' => 'ama', 'MSTRG.24430' => 'ama', 'MSTRG.6220' => 'ama', 'Nitab4.5_0000131g0220' => 'nta', 'Nitab4.5_0000455g0070' => 'nta', 'Nitab4.5_0001569g0100' => 'nta', 'Nitab4.5_0001972g0020' => 'nta', 'Nitab4.5_0004944g0040' => 'nta', 'Nitab4.5_0005199g0010' => 'nta', 'Nitab4.5_0005913g0030' => 'nta', 'Nn1g05589' => 'nnu', 'Nn2g12771' => 'nnu', 'Nn3g17797' => 'nnu', 'Nn5g29378' => 'nnu', 'Nn5g29871' => 'nnu', 'Nn6g35206' => 'nnu', 'Nn7g37415' => 'nnu', 'Nn8g40480' => 'nnu', 'Oeu009850.1' => 'oeu', 'Oeu012755.1' => 'oeu', 'Oeu025212.1' => 'oeu', 'Oeu033941.2' => 'oeu', 'Oeu042169.1' => 'oeu', 'Oeu044321.1' => 'oeu', 'Oeu056511.1' => 'oeu', 'Oeu064372.1' => 'oeu', 'Os01g0733600' => 'osa', 'Os04g0653400' => 'osa', 'Os07g0496600' => 'osa', 'Os08g0243500' => 'osa', 'Os09g0558900' => 'osa', 'Peaxi162Scf00231g00617' => 'pax', 'Peaxi162Scf00454g00327' => 'pax', 'Peaxi162Scf00814g00241' => 'pax', 'PGR042G0664' => 'pgr', 'PGR042G3763' => 'pgr', 'PGR044G1953' => 'pgr', 'PGSC0003DMG400009340' => 'stu', 'PGSC0003DMG400012672' => 'stu', 'PGSC0003DMG400013779' => 'stu', 'Phvul.003G145400' => 'pvu', 'Phvul.008G004800' => 'pvu', 'Phvul.008G182200' => 'pvu', 'Phvul.009G036200' => 'pvu', 'Potri.002G106566' => 'ptr', 'Potri.002G106632' => 'ptr', 'Potri.004G101100' => 'ptr', 'Potri.005G153800' => 'ptr', 'Potri.006G167200' => 'ptr', 'Potri.011G027100' => 'ptr', 'Potri.018G092100' => 'ptr', 'Pp3c14_22890' => 'ppa', 'Pp3c17_22110' => 'ppa', 'Pp3c20_9680' => 'ppa', 'Pp3c24_17560' => 'ppa', 'Pp3c8_19940' => 'ppa', 'Pp3c9_18000' => 'ppa', 'PRCOL_00000398' => 'pco', 'PRCOL_00003067' => 'pco', 'PRCOL_00005248' => 'pco', 'PRCOL_00006450' => 'pco', 'Prupe.1G085400' => 'ppe', 'Prupe.1G532800' => 'ppe', 'Prupe.3G238300' => 'ppe', 'Psat0s2718g0080' => 'psa', 'Psat3g206240' => 'psa', 'Psat5g046800' => 'psa', 'PSO063G1351' => 'pso', 'PSO170G4160' => 'pso', 'PSO541G2259' => 'pso', 'PSO541G5110' => 'pso', 'PSO566G0159' => 'pso', 'PSO782G4668' => 'pso', 'QL02p051854' => 'qlo', 'QL02p097801' => 'qlo', 'QL09p017878' => 'qlo', 'RcHm_v2.0_Chr1g0334331' => 'rch', 'RcHm_v2.0_Chr2g0162931' => 'rch', 'RcHm_v2.0_Chr4g0402381' => 'rch', 'RcHm_v2.0_Chr4g0402391' => 'rch', 'RcHm_v2.0_Chr4g0419591' => 'rch', 'RcHm_v2.0_Chr5g0020951' => 'rch', 'RcHm_v2.0_Chr6g0289681' => 'rch', 'RcHm_v2.0_Chr7g0226121' => 'rch', 'RcHm_v2.0_Chr7g0233891' => 'rch', 'RcHm_v2.0_Chr7g0235511' => 'rch', 'Rhsim01G0004300' => 'rsi', 'Rhsim02G0050700' => 'rsi', 'Rhsim03G0264500' => 'rsi', 'Rhsim07G0212200' => 'rsi', 'Sabra02G0083900' => 'sbr', 'Sabra04G0079000' => 'sbr', 'Sabra06G0129500' => 'sbr', 'Sabra18G0079200' => 'sbr', 'SalBow1G6327' => 'sbo', 'SalBow5G3175' => 'sbo', 'SalBow6G4447' => 'sbo', 'Sc11g0008260' => 'sci', 'Sc15g0002720' => 'sci', 'Sc18g0007490' => 'sci', 'Sed0012519' => 'sed', 'Sed0013601' => 'sed', 'Sed0019942' => 'sed', 'Sed0024465' => 'sed', 'Sed0028040' => 'sed', 'SEGI_04794' => 'sgi', 'SEGI_24969' => 'sgi', 'SEGI_26800' => 'sgi', 'SEGI_34770' => 'sgi', 'SEGI_38409' => 'sgi', 'SGA_v2.0_scaffold114G32024' => 'sas', 'SGA_v2.0_scaffold12G06070' => 'sas', 'SGA_v2.0_scaffold48G17826' => 'sas', 'SGA_v2.0_scaffold66G22448' => 'sas', 'SGA_v2.0_scaffold69G23252' => 'sas', 'SHI03727' => 'shi', 'SHI03729' => 'shi', 'SHI03732' => 'shi', 'SMO165G0009' => 'smo', 'SMO270G0091' => 'smo', 'SMO367G0652' => 'smo', 'SMO367G1106' => 'smo', 'Solyc02g085820.3' => 'sly', 'Solyc04g076380.4' => 'sly', 'Solyc07g019460.3' => 'sly', 'Sopen00g012550' => 'spe', 'Sopen02g030510' => 'spe', 'Sopen04g030140' => 'spe', 'Sopen07g007920' => 'spe', 'Sp3g01340' => 'spa', 'Sp7g22510' => 'spa', 'Sp7g22520' => 'spa', 'Sp7g28090' => 'spa', 'SpUn0657_0010' => 'spa', 'TAR183G0004' => 'tar', 'TAR314G0003' => 'tar', 'TAR371G1090' => 'tar', 'TAR371G1234' => 'tar', 'TAR381G0764' => 'tar', 'TAR383G0189' => 'tar', 'TAR615G0001' => 'tar', 'TAR625G0662' => 'tar', 'TAR628G0282' => 'tar', 'TAR629G0236' => 'tar', 'TAR636G1193' => 'tar', 'TAR726G0002' => 'tar', 'THA.LOC104799789' => 'tha', 'THA.LOC104801705' => 'tha', 'THA.LOC104803494' => 'tha', 'THA.LOC104803939' => 'tha', 'THA.LOC104806881' => 'tha', 'THA.LOC104819977' => 'tha', 'THA.LOC104820980' => 'tha', 'Thecc.08G071500' => 'tca', 'Thecc.09G177300' => 'tca', 'Thecc.09G259800' => 'tca', 'Thhalv10011322m.g' => 'esa', 'Thhalv10024546m.g' => 'esa', 'Thhalv10024568m.g' => 'esa', 'TPR.G1747' => 'tpr', 'TPR.G33419' => 'tpr', 'TPR.G5394' => 'tpr', 'TPR.G6360' => 'tpr', 'TPR.G9733' => 'tpr', 'TWI32G0568' => 'twi', 'TWI36G0344' => 'twi', 'TWI56G1361' => 'twi', 'TWI63G1242' => 'twi', 'TWI74G0592' => 'twi', 'unitig_21.g20650' => 'ugi', 'unitig_744.g24133' => 'ugi', 'unitig_744.g24134' => 'ugi', 'unitig_746.g26561' => 'ugi', 'unitig_899.g15472' => 'ugi', 'vmacro04647' => 'vma', 'vmacro04660' => 'vma', 'vmacro05566' => 'vma', 'vmacro06013' => 'vma', 'vmacro13126' => 'vma', 'VMungo1215G0106' => 'vmu', 'VMungo1309G0307' => 'vmu', 'VMungo1383G0137' => 'vmu', 'Zm00001eb010260' => 'zma', 'Zm00001eb040630' => 'zma', 'Zm00001eb040640' => 'zma', 'Zm00001eb067960' => 'zma', 'Zm00001eb152230' => 'zma', 'Zm00001eb154050' => 'zma', 'Zm00001eb178320' => 'zma', 'Zm00001eb184590' => 'zma', 'Zm00001eb320430' => 'zma', 'Zm00001eb351140' => 'zma', 'Zm00001eb414620' => 'zma', 'Zm00001eb414630' => 'zma', 'Zm00001eb432420' => 'zma', 'Zm00001eb432450' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001049', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001049' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001049', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '579', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001049' ) ), 'genes' => array( 'A01p07920' => 'bna', 'A01p15880' => 'bna', 'A01p15890' => 'bna', 'A01p22950' => 'bna', 'A01p37190' => 'bna', 'A03p32880' => 'bna', 'A03p55340' => 'bna', 'A03p59610' => 'bna', 'A05p32700' => 'bna', 'A08p19350' => 'bna', 'Aa31LG2G20320' => 'aar', 'Aa31LG4G9620' => 'aar', 'Aa31LG5G12810' => 'aar', 'Aa31LG8G15960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3817' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.439' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1703' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_340.441' => 'aag', 'Actinidia02749' => 'ach', 'Actinidia08191' => 'ach', 'Actinidia08192' => 'ach', 'Actinidia15878' => 'ach', 'Actinidia15879' => 'ach', 'Actinidia19245' => 'ach', 'Actinidia19628' => 'ach', 'Actinidia19831' => 'ach', 'Actinidia27012' => 'ach', 'Actinidia38634' => 'ach', 'Ah.01g008960' => 'amhyb', 'Ah.05g171320' => 'amhyb', 'Ah.09g229840' => 'amhyb', 'Ah.10g037600' => 'amhyb', 'Ah.14g083860' => 'amhyb', 'AL3G11560' => 'aly', 'AL777U10010' => 'aly', 'AL7G21940' => 'aly', 'AL7G28700' => 'aly', 'Aqoxy3G03945' => 'aox', 'Aqoxy6G00858' => 'aox', 'Aqoxy7G03051' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2XG0SD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQAG9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBV3FR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0I0E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPBB19' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXV5G1' => 'arhy', 'AT3G02280' => 'ath', 'AT3G24710' => 'ath', 'AT4G24520' => 'ath', 'AT4G30210' => 'ath', 'ATR0564G081' => 'atr', 'ATR0564G359' => 'atr', 'ATR0580G449' => 'atr', 'Atru.chr13.1005' => 'acertr', 'Atru.chr13.1275' => 'acertr', 'Atru.chr7.1178' => 'acertr', 'Atru.chr7.616' => 'acertr', 'AUR62008979' => 'cqu', 'AUR62014350' => 'cqu', 'AUR62014524' => 'cqu', 'AUR62019093' => 'cqu', 'AUR62021298' => 'cqu', 'AUR62033215' => 'cqu', 'AUR62043530' => 'cqu', 'BcaB01g02067' => 'bca', 'BcaB04g17099' => 'bca', 'BcaB06g26054' => 'bca', 'BcaB06g26057' => 'bca', 'BcaB07g33014' => 'bca', 'BcaB08g34532' => 'bca', 'BcaC01g01164' => 'bca', 'BcaC01g04452' => 'bca', 'BcaC01g04542' => 'bca', 'BcaC05g28232' => 'bca', 'BcaC05g28235' => 'bca', 'BcaC06g32879' => 'bca', 'BcaC07g37699' => 'bca', 'BcaC09g50859' => 'bca', 'BcaC09g50860' => 'bca', 'BcaC09g51804' => 'bca', 'BcaNung00530' => 'bca', 'BcaNung06311' => 'bca', 'BcaNung06377' => 'bca', 'BolC1t00875H' => 'bol', 'BolC1t01910H' => 'bol', 'BolC1t01911H' => 'bol', 'BolC3t16266H' => 'bol', 'BolC3t21192H' => 'bol', 'BolC3t21193H' => 'bol', 'BolC4t24578H' => 'bol', 'BolC5t33015H' => 'bol', 'BolC5t33017H' => 'bol', 'BolC7t45855H' => 'bol', 'BolC7t46229H' => 'bol', 'BolC8t47349H' => 'bol', 'BolC8t48085H' => 'bol', 'BraA01t00738Z' => 'bra', 'BraA01t01522Z' => 'bra', 'BraA01t01523Z' => 'bra', 'BraA01t03780Z' => 'bra', 'BraA03t12457Z' => 'bra', 'BraA03t14593Z' => 'bra', 'BraA03t15018Z' => 'bra', 'BraA08t33896Z' => 'bra', 'C01p08840' => 'bna', 'C01p19820' => 'bna', 'C01p19840' => 'bna', 'C03p40010' => 'bna', 'C03p88810' => 'bna', 'C05p42860' => 'bna', 'C07p53630' => 'bna', 'C07p57650' => 'bna', 'CAN.G1165.2' => 'can', 'CAN.G440.3' => 'can', 'CAN.G475.20' => 'can', 'CAN.G625.5' => 'can', 'CAN.G852.5' => 'can', 'CANSAT11G1186' => 'cansat', 'CANSAT25G1018' => 'cansat', 'CANSAT64G1724' => 'cansat', 'CARHR076240' => 'chi', 'CARHR231910' => 'chi', 'CARHR231920' => 'chi', 'CARHR238120' => 'chi', 'CARHR246570' => 'chi', 'Carub.0003s0139' => 'cru', 'Carub.0003s2478' => 'cru', 'Carub.0007s1040' => 'cru', 'Carub.0007s1655' => 'cru', 'Ca_01353_v3' => 'car', 'Ca_04065_v3' => 'car', 'Ca_21228_v3' => 'car', 'Ca_23435_v3' => 'car', 'CBR_g45849' => 'cbr', 'CBR_g66801' => 'cbr', 'CBR_g76440' => 'cbr', 'Cc06_g13220' => 'ccan', 'Cc07_g08880' => 'ccan', 'Cc10_g15930' => 'ccan', 'CDE02G0228' => 'cde', 'CDE04G0722' => 'cde', 'CDE04G2168' => 'cde', 'CDE05G0709' => 'cde', 'CDE05G0754' => 'cde', 'CDE05G1223' => 'cde', 'CDE05G2069' => 'cde', 'CDE05G2137' => 'cde', 'CDE05G2905' => 'cde', 'CDE07G0189' => 'cde', 'Cfa013502' => 'cfa', 'Cfa013801' => 'cfa', 'Cfa022576' => 'cfa', 'Cfa023262' => 'cfa', 'Cfa023480' => 'cfa', 'Ciclev10000469m.g' => 'ccl', 'Ciclev10000583m.g' => 'ccl', 'Ciclev10007535m.g' => 'ccl', 'CiPaw.04G041100' => 'cil', 'CiPaw.07G192400' => 'cil', 'CiPaw.08G036100' => 'cil', 'CiPaw.08G055900' => 'cil', 'ClCG06G013360' => 'cla', 'ClCG07G017080' => 'cla', 'ClCG11G012150' => 'cla', 'COL.COLO4_25241' => 'col', 'COL.COLO4_25242' => 'col', 'COL.COLO4_35252' => 'col', 'COL.COLO4_37704' => 'col', 'Cpa.g.c29936.1' => 'cpa', 'Cpa.g.sc179.4' => 'cpa', 'Cpa.g.sc21.27' => 'cpa', 'Cpa.g.sc233.8' => 'cpa', 'Cre01.g039350' => 'cre', 'Cre03.g180300' => 'cre', 'Cre12.g551850' => 'cre', 'Cre16.g683550' => 'cre', 'CsaV3_1G031610' => 'csa', 'CsaV3_2G008410' => 'csa', 'CsaV3_4G004300' => 'csa', 'CSS0024879' => 'camsi', 'CSS0032537' => 'camsi', 'CSS0037498' => 'camsi', 'CSS0043035' => 'camsi', 'CSS0049553' => 'camsi', 'DCAR_014700' => 'dca', 'DCAR_017970' => 'dca', 'DCAR_019602' => 'dca', 'DCAR_020124' => 'dca', 'DCAR_029529' => 'dca', 'DCAR_029530' => 'dca', 'Dinv34836' => 'din', 'Dinv41245' => 'din', 'Dinv42608' => 'din', 'Dinv42720' => 'din', 'Dinv43381' => 'din', 'Dinv44863' => 'din', 'Duzib041G0510' => 'dzi', 'Duzib093G0120' => 'dzi', 'Duzib150G0039' => 'dzi', 'Duzib150G1377' => 'dzi', 'Duzib168G0135' => 'dzi', 'Duzib170G0377' => 'dzi', 'ECA234G4507' => 'eca', 'ECA236G0274' => 'eca', 'ECA236G3859' => 'eca', 'ECA238G2427' => 'eca', 'ECA240G1318' => 'eca', 'EL10Ac1g00992' => 'bvu', 'EL10Ac2g04590' => 'bvu', 'EL10Ac8g18281' => 'bvu', 'Eucgr.C00154' => 'egr', 'Eucgr.C02330' => 'egr', 'Eucgr.J01497' => 'egr', 'FAN01G0915' => 'fan', 'FAN02G0215' => 'fan', 'FAN03G1095' => 'fan', 'FAN04G0104' => 'fan', 'FAN05G1438' => 'fan', 'FAN07G2539' => 'fan', 'FAN08G0165' => 'fan', 'FAN09G1302' => 'fan', 'FAN10G0721' => 'fan', 'FAN11G1854' => 'fan', 'FAN12G1664' => 'fan', 'FAN13G3329' => 'fan', 'FAN14G1155' => 'fan', 'FAN14G2476' => 'fan', 'FAN17G0476' => 'fan', 'FAN18G0905' => 'fan', 'FAN18G0950' => 'fan', 'FAN19G0265' => 'fan', 'FAN22G1504' => 'fan', 'FvH4_1g29080' => 'fve', 'FvH4_3g26990' => 'fve', 'FvH4_4g08180' => 'fve', 'FvH4_5g10660' => 'fve', 'FvH4_5g34830' => 'fve', 'FvH4_6g45220' => 'fve', 'FvH4_7g05330' => 'fve', 'FvH4_7g05331' => 'fve', 'Glyma.02G160251' => 'gma', 'Glyma.02G214700' => 'gma', 'Glyma.04G095500' => 'gma', 'Glyma.06G097200' => 'gma', 'Glyma.08G364302' => 'gma', 'Glyma.13G096500' => 'gma', 'Glyma.14G182100' => 'gma', 'Glyma.17G063000' => 'gma', 'Glyma.18G297800' => 'gma', 'Gohir.A01G126300' => 'ghi', 'Gohir.A05G004900' => 'ghi', 'Gohir.A05G219300' => 'ghi', 'Gohir.A05G360900' => 'ghi', 'Gohir.A07G116600' => 'ghi', 'Gohir.A08G023216' => 'ghi', 'Gohir.A08G023408' => 'ghi', 'Gohir.A08G023416' => 'ghi', 'Gohir.D01G113900' => 'ghi', 'Gohir.D04G100432' => 'ghi', 'Gohir.D04G111100' => 'ghi', 'Gohir.D05G005800' => 'ghi', 'Gohir.D05G221900' => 'ghi', 'Gohir.D07G121000' => 'ghi', 'Gohir.D08G034000' => 'ghi', 'Gohir.D08G111608' => 'ghi', 'Gohir.D10G139266' => 'ghi', 'Gohir.D11G131600' => 'ghi', 'Gohir.D11G228980' => 'ghi', 'Gorai.001G130600' => 'gra', 'Gorai.002G138900' => 'gra', 'Gorai.004G031600' => 'gra', 'Gorai.004G119600' => 'gra', 'Gorai.006G045500' => 'gra', 'Gorai.009G005600' => 'gra', 'Gorai.009G229300' => 'gra', 'GSVIVG01009185001' => 'vvi', 'GSVIVG01014384001' => 'vvi', 'GSVIVG01014385001' => 'vvi', 'GSVIVG01029213001' => 'vvi', 'GSVIVG01031054001' => 'vvi', 'HanXRQChr02g0034591' => 'han', 'HanXRQChr05g0142991' => 'han', 'HanXRQChr09g0244761' => 'han', 'HanXRQChr09g0254451' => 'han', 'HanXRQChr09g0255411' => 'han', 'HanXRQChr12g0358291' => 'han', 'HanXRQChr12g0358301' => 'han', 'HanXRQChr12g0365411' => 'han', 'HanXRQChr12g0376471' => 'han', 'HanXRQChr13g0412341' => 'han', 'HanXRQChr14g0429191' => 'han', 'Haze_22094' => 'cav', 'Haze_22464' => 'cav', 'Hma1.2p1_0125F.1_g058820' => 'hma', 'Hma1.2p1_0550F.1_g177330' => 'hma', 'Hma1.2p1_1025F.1_g249330' => 'hma', 'Hma1.2p1_3581F.1_g336840' => 'hma', 'HPP92_003525' => 'vpl', 'HPP92_005481' => 'vpl', 'HPP92_010748' => 'vpl', 'HPP92_015367' => 'vpl', 'HPP92_018334' => 'vpl', 'HPP92_018376' => 'vpl', 'Hund01739' => 'sun', 'Hund09029' => 'sun', 'Hund13726' => 'sun', 'Hund17286' => 'sun', 'Hund26351' => 'sun', 'Hund26816' => 'sun', 'Lalb_Chr04g0252811' => 'lal', 'Lalb_Chr07g0180491' => 'lal', 'Lalb_Chr08g0242561' => 'lal', 'Lalb_Chr10g0091161' => 'lal', 'Lalb_Chr11g0064941' => 'lal', 'Lalb_Chr12g0199431' => 'lal', 'Lj1g0009282' => 'lja', 'Lj1g0012839' => 'lja', 'Lj1g0028233' => 'lja', 'Lj4C194T12' => 'lonja', 'Lj4C717G5' => 'lonja', 'Lj4C738G5' => 'lonja', 'Lj4g0000806' => 'lja', 'Lj4g0009595' => 'lja', 'Lj5A7T12' => 'lonja', 'Lj6g0008823' => 'lja', 'Lj6g0018247' => 'lja', 'Lj9A24T28' => 'lonja', 'Lj9C26T2' => 'lonja', 'Lsat_1_v5_gn_0_21360' => 'lsa', 'Lsat_1_v5_gn_2_110721' => 'lsa', 'Lsat_1_v5_gn_2_110801' => 'lsa', 'Lsat_1_v5_gn_2_9800' => 'lsa', 'Lsat_1_v5_gn_3_129101' => 'lsa', 'Lsat_1_v5_gn_3_81881' => 'lsa', 'Lsat_1_v5_gn_5_79581' => 'lsa', 'Lsat_1_v5_gn_5_85441' => 'lsa', 'Lsat_1_v5_gn_6_70320' => 'lsa', 'Lsat_1_v5_gn_6_72241' => 'lsa', 'Lsat_1_v5_gn_7_115600' => 'lsa', 'Lsat_1_v5_gn_7_54581' => 'lsa', 'Lsat_1_v5_gn_8_1281' => 'lsa', 'Lsat_1_v5_gn_8_67661' => 'lsa', 'Lsat_1_v5_gn_9_32960' => 'lsa', 'Lsat_1_v5_gn_9_87640' => 'lsa', 'Lsat_1_v5_gn_9_87680' => 'lsa', 'Manes.01G109200' => 'mes', 'Manes.14G154000' => 'mes', 'Manes.18G058100' => 'mes', 'Manes.18G058200' => 'mes', 'Mapoly0012s0011' => 'mpo', 'Mapoly0159s0022' => 'mpo', 'MBI04_g11121_MAGBIO' => 'mbi', 'MBI14_g17372_MAGBIO' => 'mbi', 'MBI15_g39956_MAGBIO' => 'mbi', 'MBI16_g27571_MAGBIO' => 'mbi', 'MBI16_g39836_MAGBIO' => 'mbi', 'MBI19_g21647_MAGBIO' => 'mbi', 'MBI19_g21649_MAGBIO' => 'mbi', 'MBI19_g21650_MAGBIO' => 'mbi', 'MCO01G527' => 'mco', 'MCO02G064' => 'mco', 'MCO06G260' => 'mco', 'MD08G1199100' => 'mdo', 'MD09G1086400' => 'mdo', 'MD09G1086700' => 'mdo', 'MD09G1087200' => 'mdo', 'MD12G1122800' => 'mdo', 'MD13G1253300' => 'mdo', 'MD15G1386100' => 'mdo', 'MD16G1257600' => 'mdo', 'Medtr1g102950' => 'mtr', 'Medtr3g100160' => 'mtr', 'Medtr4g128020' => 'mtr', 'Medtr7g101180' => 'mtr', 'Medtr7g406970' => 'mtr', 'MELO3C004023.2' => 'cme', 'MELO3C017461.2' => 'cme', 'MELO3C017636.2' => 'cme', 'Migut.J01483' => 'egut', 'Migut.K00241' => 'egut', 'Migut.L00308' => 'egut', 'Migut.N02860' => 'egut', 'MSTRG.10739' => 'ama', 'MSTRG.19708' => 'ama', 'MSTRG.24430' => 'ama', 'MSTRG.6220' => 'ama', 'Nitab4.5_0000131g0220' => 'nta', 'Nitab4.5_0000455g0070' => 'nta', 'Nitab4.5_0001569g0100' => 'nta', 'Nitab4.5_0001972g0020' => 'nta', 'Nitab4.5_0004944g0040' => 'nta', 'Nitab4.5_0005199g0010' => 'nta', 'Nitab4.5_0005913g0030' => 'nta', 'Nn1g05589' => 'nnu', 'Nn2g12771' => 'nnu', 'Nn3g17797' => 'nnu', 'Nn5g29378' => 'nnu', 'Nn5g29871' => 'nnu', 'Nn6g35206' => 'nnu', 'Nn7g37415' => 'nnu', 'Nn8g40480' => 'nnu', 'Oeu009850.1' => 'oeu', 'Oeu012755.1' => 'oeu', 'Oeu025212.1' => 'oeu', 'Oeu033941.2' => 'oeu', 'Oeu042169.1' => 'oeu', 'Oeu044321.1' => 'oeu', 'Oeu056511.1' => 'oeu', 'Oeu064372.1' => 'oeu', 'Os01g0733600' => 'osa', 'Os04g0653400' => 'osa', 'Os07g0496600' => 'osa', 'Os08g0243500' => 'osa', 'Os09g0558900' => 'osa', 'Peaxi162Scf00231g00617' => 'pax', 'Peaxi162Scf00454g00327' => 'pax', 'Peaxi162Scf00814g00241' => 'pax', 'PGR042G0664' => 'pgr', 'PGR042G3763' => 'pgr', 'PGR044G1953' => 'pgr', 'PGSC0003DMG400009340' => 'stu', 'PGSC0003DMG400012672' => 'stu', 'PGSC0003DMG400013779' => 'stu', 'Phvul.003G145400' => 'pvu', 'Phvul.008G004800' => 'pvu', 'Phvul.008G182200' => 'pvu', 'Phvul.009G036200' => 'pvu', 'Potri.002G106566' => 'ptr', 'Potri.002G106632' => 'ptr', 'Potri.004G101100' => 'ptr', 'Potri.005G153800' => 'ptr', 'Potri.006G167200' => 'ptr', 'Potri.011G027100' => 'ptr', 'Potri.018G092100' => 'ptr', 'Pp3c14_22890' => 'ppa', 'Pp3c17_22110' => 'ppa', 'Pp3c20_9680' => 'ppa', 'Pp3c24_17560' => 'ppa', 'Pp3c8_19940' => 'ppa', 'Pp3c9_18000' => 'ppa', 'PRCOL_00000398' => 'pco', 'PRCOL_00003067' => 'pco', 'PRCOL_00005248' => 'pco', 'PRCOL_00006450' => 'pco', 'Prupe.1G085400' => 'ppe', 'Prupe.1G532800' => 'ppe', 'Prupe.3G238300' => 'ppe', 'Psat0s2718g0080' => 'psa', 'Psat3g206240' => 'psa', 'Psat5g046800' => 'psa', 'PSO063G1351' => 'pso', 'PSO170G4160' => 'pso', 'PSO541G2259' => 'pso', 'PSO541G5110' => 'pso', 'PSO566G0159' => 'pso', 'PSO782G4668' => 'pso', 'QL02p051854' => 'qlo', 'QL02p097801' => 'qlo', 'QL09p017878' => 'qlo', 'RcHm_v2.0_Chr1g0334331' => 'rch', 'RcHm_v2.0_Chr2g0162931' => 'rch', 'RcHm_v2.0_Chr4g0402381' => 'rch', 'RcHm_v2.0_Chr4g0402391' => 'rch', 'RcHm_v2.0_Chr4g0419591' => 'rch', 'RcHm_v2.0_Chr5g0020951' => 'rch', 'RcHm_v2.0_Chr6g0289681' => 'rch', 'RcHm_v2.0_Chr7g0226121' => 'rch', 'RcHm_v2.0_Chr7g0233891' => 'rch', 'RcHm_v2.0_Chr7g0235511' => 'rch', 'Rhsim01G0004300' => 'rsi', 'Rhsim02G0050700' => 'rsi', 'Rhsim03G0264500' => 'rsi', 'Rhsim07G0212200' => 'rsi', 'Sabra02G0083900' => 'sbr', 'Sabra04G0079000' => 'sbr', 'Sabra06G0129500' => 'sbr', 'Sabra18G0079200' => 'sbr', 'SalBow1G6327' => 'sbo', 'SalBow5G3175' => 'sbo', 'SalBow6G4447' => 'sbo', 'Sc11g0008260' => 'sci', 'Sc15g0002720' => 'sci', 'Sc18g0007490' => 'sci', 'Sed0012519' => 'sed', 'Sed0013601' => 'sed', 'Sed0019942' => 'sed', 'Sed0024465' => 'sed', 'Sed0028040' => 'sed', 'SEGI_04794' => 'sgi', 'SEGI_24969' => 'sgi', 'SEGI_26800' => 'sgi', 'SEGI_34770' => 'sgi', 'SEGI_38409' => 'sgi', 'SGA_v2.0_scaffold114G32024' => 'sas', 'SGA_v2.0_scaffold12G06070' => 'sas', 'SGA_v2.0_scaffold48G17826' => 'sas', 'SGA_v2.0_scaffold66G22448' => 'sas', 'SGA_v2.0_scaffold69G23252' => 'sas', 'SHI03727' => 'shi', 'SHI03729' => 'shi', 'SHI03732' => 'shi', 'SMO165G0009' => 'smo', 'SMO270G0091' => 'smo', 'SMO367G0652' => 'smo', 'SMO367G1106' => 'smo', 'Solyc02g085820.3' => 'sly', 'Solyc04g076380.4' => 'sly', 'Solyc07g019460.3' => 'sly', 'Sopen00g012550' => 'spe', 'Sopen02g030510' => 'spe', 'Sopen04g030140' => 'spe', 'Sopen07g007920' => 'spe', 'Sp3g01340' => 'spa', 'Sp7g22510' => 'spa', 'Sp7g22520' => 'spa', 'Sp7g28090' => 'spa', 'SpUn0657_0010' => 'spa', 'TAR183G0004' => 'tar', 'TAR314G0003' => 'tar', 'TAR371G1090' => 'tar', 'TAR371G1234' => 'tar', 'TAR381G0764' => 'tar', 'TAR383G0189' => 'tar', 'TAR615G0001' => 'tar', 'TAR625G0662' => 'tar', 'TAR628G0282' => 'tar', 'TAR629G0236' => 'tar', 'TAR636G1193' => 'tar', 'TAR726G0002' => 'tar', 'THA.LOC104799789' => 'tha', 'THA.LOC104801705' => 'tha', 'THA.LOC104803494' => 'tha', 'THA.LOC104803939' => 'tha', 'THA.LOC104806881' => 'tha', 'THA.LOC104819977' => 'tha', 'THA.LOC104820980' => 'tha', 'Thecc.08G071500' => 'tca', 'Thecc.09G177300' => 'tca', 'Thecc.09G259800' => 'tca', 'Thhalv10011322m.g' => 'esa', 'Thhalv10024546m.g' => 'esa', 'Thhalv10024568m.g' => 'esa', 'TPR.G1747' => 'tpr', 'TPR.G33419' => 'tpr', 'TPR.G5394' => 'tpr', 'TPR.G6360' => 'tpr', 'TPR.G9733' => 'tpr', 'TWI32G0568' => 'twi', 'TWI36G0344' => 'twi', 'TWI56G1361' => 'twi', 'TWI63G1242' => 'twi', 'TWI74G0592' => 'twi', 'unitig_21.g20650' => 'ugi', 'unitig_744.g24133' => 'ugi', 'unitig_744.g24134' => 'ugi', 'unitig_746.g26561' => 'ugi', 'unitig_899.g15472' => 'ugi', 'vmacro04647' => 'vma', 'vmacro04660' => 'vma', 'vmacro05566' => 'vma', 'vmacro06013' => 'vma', 'vmacro13126' => 'vma', 'VMungo1215G0106' => 'vmu', 'VMungo1309G0307' => 'vmu', 'VMungo1383G0137' => 'vmu', 'Zm00001eb010260' => 'zma', 'Zm00001eb040630' => 'zma', 'Zm00001eb040640' => 'zma', 'Zm00001eb067960' => 'zma', 'Zm00001eb152230' => 'zma', 'Zm00001eb154050' => 'zma', 'Zm00001eb178320' => 'zma', 'Zm00001eb184590' => 'zma', 'Zm00001eb320430' => 'zma', 'Zm00001eb351140' => 'zma', 'Zm00001eb414620' => 'zma', 'Zm00001eb414630' => 'zma', 'Zm00001eb432420' => 'zma', 'Zm00001eb432450' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001049' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001049' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001049' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001049' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001049', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '579', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p07920' => 'bna', 'A01p15880' => 'bna', 'A01p15890' => 'bna', 'A01p22950' => 'bna', 'A01p37190' => 'bna', 'A03p32880' => 'bna', 'A03p55340' => 'bna', 'A03p59610' => 'bna', 'A05p32700' => 'bna', 'A08p19350' => 'bna', 'Aa31LG2G20320' => 'aar', 'Aa31LG4G9620' => 'aar', 'Aa31LG5G12810' => 'aar', 'Aa31LG8G15960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3817' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.439' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1703' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_340.441' => 'aag', 'Actinidia02749' => 'ach', 'Actinidia08191' => 'ach', 'Actinidia08192' => 'ach', 'Actinidia15878' => 'ach', 'Actinidia15879' => 'ach', 'Actinidia19245' => 'ach', 'Actinidia19628' => 'ach', 'Actinidia19831' => 'ach', 'Actinidia27012' => 'ach', 'Actinidia38634' => 'ach', 'Ah.01g008960' => 'amhyb', 'Ah.05g171320' => 'amhyb', 'Ah.09g229840' => 'amhyb', 'Ah.10g037600' => 'amhyb', 'Ah.14g083860' => 'amhyb', 'AL3G11560' => 'aly', 'AL777U10010' => 'aly', 'AL7G21940' => 'aly', 'AL7G28700' => 'aly', 'Aqoxy3G03945' => 'aox', 'Aqoxy6G00858' => 'aox', 'Aqoxy7G03051' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2XG0SD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQAG9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBV3FR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0I0E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPBB19' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXV5G1' => 'arhy', 'AT3G02280' => 'ath', 'AT3G24710' => 'ath', 'AT4G24520' => 'ath', 'AT4G30210' => 'ath', 'ATR0564G081' => 'atr', 'ATR0564G359' => 'atr', 'ATR0580G449' => 'atr', 'Atru.chr13.1005' => 'acertr', 'Atru.chr13.1275' => 'acertr', 'Atru.chr7.1178' => 'acertr', 'Atru.chr7.616' => 'acertr', 'AUR62008979' => 'cqu', 'AUR62014350' => 'cqu', 'AUR62014524' => 'cqu', 'AUR62019093' => 'cqu', 'AUR62021298' => 'cqu', 'AUR62033215' => 'cqu', 'AUR62043530' => 'cqu', 'BcaB01g02067' => 'bca', 'BcaB04g17099' => 'bca', 'BcaB06g26054' => 'bca', 'BcaB06g26057' => 'bca', 'BcaB07g33014' => 'bca', 'BcaB08g34532' => 'bca', 'BcaC01g01164' => 'bca', 'BcaC01g04452' => 'bca', 'BcaC01g04542' => 'bca', 'BcaC05g28232' => 'bca', 'BcaC05g28235' => 'bca', 'BcaC06g32879' => 'bca', 'BcaC07g37699' => 'bca', 'BcaC09g50859' => 'bca', 'BcaC09g50860' => 'bca', 'BcaC09g51804' => 'bca', 'BcaNung00530' => 'bca', 'BcaNung06311' => 'bca', 'BcaNung06377' => 'bca', 'BolC1t00875H' => 'bol', 'BolC1t01910H' => 'bol', 'BolC1t01911H' => 'bol', 'BolC3t16266H' => 'bol', 'BolC3t21192H' => 'bol', 'BolC3t21193H' => 'bol', 'BolC4t24578H' => 'bol', 'BolC5t33015H' => 'bol', 'BolC5t33017H' => 'bol', 'BolC7t45855H' => 'bol', 'BolC7t46229H' => 'bol', 'BolC8t47349H' => 'bol', 'BolC8t48085H' => 'bol', 'BraA01t00738Z' => 'bra', 'BraA01t01522Z' => 'bra', 'BraA01t01523Z' => 'bra', 'BraA01t03780Z' => 'bra', 'BraA03t12457Z' => 'bra', 'BraA03t14593Z' => 'bra', 'BraA03t15018Z' => 'bra', 'BraA08t33896Z' => 'bra', 'C01p08840' => 'bna', 'C01p19820' => 'bna', 'C01p19840' => 'bna', 'C03p40010' => 'bna', 'C03p88810' => 'bna', 'C05p42860' => 'bna', 'C07p53630' => 'bna', 'C07p57650' => 'bna', 'CAN.G1165.2' => 'can', 'CAN.G440.3' => 'can', 'CAN.G475.20' => 'can', 'CAN.G625.5' => 'can', 'CAN.G852.5' => 'can', 'CANSAT11G1186' => 'cansat', 'CANSAT25G1018' => 'cansat', 'CANSAT64G1724' => 'cansat', 'CARHR076240' => 'chi', 'CARHR231910' => 'chi', 'CARHR231920' => 'chi', 'CARHR238120' => 'chi', 'CARHR246570' => 'chi', 'Carub.0003s0139' => 'cru', 'Carub.0003s2478' => 'cru', 'Carub.0007s1040' => 'cru', 'Carub.0007s1655' => 'cru', 'Ca_01353_v3' => 'car', 'Ca_04065_v3' => 'car', 'Ca_21228_v3' => 'car', 'Ca_23435_v3' => 'car', 'CBR_g45849' => 'cbr', 'CBR_g66801' => 'cbr', 'CBR_g76440' => 'cbr', 'Cc06_g13220' => 'ccan', 'Cc07_g08880' => 'ccan', 'Cc10_g15930' => 'ccan', 'CDE02G0228' => 'cde', 'CDE04G0722' => 'cde', 'CDE04G2168' => 'cde', 'CDE05G0709' => 'cde', 'CDE05G0754' => 'cde', 'CDE05G1223' => 'cde', 'CDE05G2069' => 'cde', 'CDE05G2137' => 'cde', 'CDE05G2905' => 'cde', 'CDE07G0189' => 'cde', 'Cfa013502' => 'cfa', 'Cfa013801' => 'cfa', 'Cfa022576' => 'cfa', 'Cfa023262' => 'cfa', 'Cfa023480' => 'cfa', 'Ciclev10000469m.g' => 'ccl', 'Ciclev10000583m.g' => 'ccl', 'Ciclev10007535m.g' => 'ccl', 'CiPaw.04G041100' => 'cil', 'CiPaw.07G192400' => 'cil', 'CiPaw.08G036100' => 'cil', 'CiPaw.08G055900' => 'cil', 'ClCG06G013360' => 'cla', 'ClCG07G017080' => 'cla', 'ClCG11G012150' => 'cla', 'COL.COLO4_25241' => 'col', 'COL.COLO4_25242' => 'col', 'COL.COLO4_35252' => 'col', 'COL.COLO4_37704' => 'col', 'Cpa.g.c29936.1' => 'cpa', 'Cpa.g.sc179.4' => 'cpa', 'Cpa.g.sc21.27' => 'cpa', 'Cpa.g.sc233.8' => 'cpa', 'Cre01.g039350' => 'cre', 'Cre03.g180300' => 'cre', 'Cre12.g551850' => 'cre', 'Cre16.g683550' => 'cre', 'CsaV3_1G031610' => 'csa', 'CsaV3_2G008410' => 'csa', 'CsaV3_4G004300' => 'csa', 'CSS0024879' => 'camsi', 'CSS0032537' => 'camsi', 'CSS0037498' => 'camsi', 'CSS0043035' => 'camsi', 'CSS0049553' => 'camsi', 'DCAR_014700' => 'dca', 'DCAR_017970' => 'dca', 'DCAR_019602' => 'dca', 'DCAR_020124' => 'dca', 'DCAR_029529' => 'dca', 'DCAR_029530' => 'dca', 'Dinv34836' => 'din', 'Dinv41245' => 'din', 'Dinv42608' => 'din', 'Dinv42720' => 'din', 'Dinv43381' => 'din', 'Dinv44863' => 'din', 'Duzib041G0510' => 'dzi', 'Duzib093G0120' => 'dzi', 'Duzib150G0039' => 'dzi', 'Duzib150G1377' => 'dzi', 'Duzib168G0135' => 'dzi', 'Duzib170G0377' => 'dzi', 'ECA234G4507' => 'eca', 'ECA236G0274' => 'eca', 'ECA236G3859' => 'eca', 'ECA238G2427' => 'eca', 'ECA240G1318' => 'eca', 'EL10Ac1g00992' => 'bvu', 'EL10Ac2g04590' => 'bvu', 'EL10Ac8g18281' => 'bvu', 'Eucgr.C00154' => 'egr', 'Eucgr.C02330' => 'egr', 'Eucgr.J01497' => 'egr', 'FAN01G0915' => 'fan', 'FAN02G0215' => 'fan', 'FAN03G1095' => 'fan', 'FAN04G0104' => 'fan', 'FAN05G1438' => 'fan', 'FAN07G2539' => 'fan', 'FAN08G0165' => 'fan', 'FAN09G1302' => 'fan', 'FAN10G0721' => 'fan', 'FAN11G1854' => 'fan', 'FAN12G1664' => 'fan', 'FAN13G3329' => 'fan', 'FAN14G1155' => 'fan', 'FAN14G2476' => 'fan', 'FAN17G0476' => 'fan', 'FAN18G0905' => 'fan', 'FAN18G0950' => 'fan', 'FAN19G0265' => 'fan', 'FAN22G1504' => 'fan', 'FvH4_1g29080' => 'fve', 'FvH4_3g26990' => 'fve', 'FvH4_4g08180' => 'fve', 'FvH4_5g10660' => 'fve', 'FvH4_5g34830' => 'fve', 'FvH4_6g45220' => 'fve', 'FvH4_7g05330' => 'fve', 'FvH4_7g05331' => 'fve', 'Glyma.02G160251' => 'gma', 'Glyma.02G214700' => 'gma', 'Glyma.04G095500' => 'gma', 'Glyma.06G097200' => 'gma', 'Glyma.08G364302' => 'gma', 'Glyma.13G096500' => 'gma', 'Glyma.14G182100' => 'gma', 'Glyma.17G063000' => 'gma', 'Glyma.18G297800' => 'gma', 'Gohir.A01G126300' => 'ghi', 'Gohir.A05G004900' => 'ghi', 'Gohir.A05G219300' => 'ghi', 'Gohir.A05G360900' => 'ghi', 'Gohir.A07G116600' => 'ghi', 'Gohir.A08G023216' => 'ghi', 'Gohir.A08G023408' => 'ghi', 'Gohir.A08G023416' => 'ghi', 'Gohir.D01G113900' => 'ghi', 'Gohir.D04G100432' => 'ghi', 'Gohir.D04G111100' => 'ghi', 'Gohir.D05G005800' => 'ghi', 'Gohir.D05G221900' => 'ghi', 'Gohir.D07G121000' => 'ghi', 'Gohir.D08G034000' => 'ghi', 'Gohir.D08G111608' => 'ghi', 'Gohir.D10G139266' => 'ghi', 'Gohir.D11G131600' => 'ghi', 'Gohir.D11G228980' => 'ghi', 'Gorai.001G130600' => 'gra', 'Gorai.002G138900' => 'gra', 'Gorai.004G031600' => 'gra', 'Gorai.004G119600' => 'gra', 'Gorai.006G045500' => 'gra', 'Gorai.009G005600' => 'gra', 'Gorai.009G229300' => 'gra', 'GSVIVG01009185001' => 'vvi', 'GSVIVG01014384001' => 'vvi', 'GSVIVG01014385001' => 'vvi', 'GSVIVG01029213001' => 'vvi', 'GSVIVG01031054001' => 'vvi', 'HanXRQChr02g0034591' => 'han', 'HanXRQChr05g0142991' => 'han', 'HanXRQChr09g0244761' => 'han', 'HanXRQChr09g0254451' => 'han', 'HanXRQChr09g0255411' => 'han', 'HanXRQChr12g0358291' => 'han', 'HanXRQChr12g0358301' => 'han', 'HanXRQChr12g0365411' => 'han', 'HanXRQChr12g0376471' => 'han', 'HanXRQChr13g0412341' => 'han', 'HanXRQChr14g0429191' => 'han', 'Haze_22094' => 'cav', 'Haze_22464' => 'cav', 'Hma1.2p1_0125F.1_g058820' => 'hma', 'Hma1.2p1_0550F.1_g177330' => 'hma', 'Hma1.2p1_1025F.1_g249330' => 'hma', 'Hma1.2p1_3581F.1_g336840' => 'hma', 'HPP92_003525' => 'vpl', 'HPP92_005481' => 'vpl', 'HPP92_010748' => 'vpl', 'HPP92_015367' => 'vpl', 'HPP92_018334' => 'vpl', 'HPP92_018376' => 'vpl', 'Hund01739' => 'sun', 'Hund09029' => 'sun', 'Hund13726' => 'sun', 'Hund17286' => 'sun', 'Hund26351' => 'sun', 'Hund26816' => 'sun', 'Lalb_Chr04g0252811' => 'lal', 'Lalb_Chr07g0180491' => 'lal', 'Lalb_Chr08g0242561' => 'lal', 'Lalb_Chr10g0091161' => 'lal', 'Lalb_Chr11g0064941' => 'lal', 'Lalb_Chr12g0199431' => 'lal', 'Lj1g0009282' => 'lja', 'Lj1g0012839' => 'lja', 'Lj1g0028233' => 'lja', 'Lj4C194T12' => 'lonja', 'Lj4C717G5' => 'lonja', 'Lj4C738G5' => 'lonja', 'Lj4g0000806' => 'lja', 'Lj4g0009595' => 'lja', 'Lj5A7T12' => 'lonja', 'Lj6g0008823' => 'lja', 'Lj6g0018247' => 'lja', 'Lj9A24T28' => 'lonja', 'Lj9C26T2' => 'lonja', 'Lsat_1_v5_gn_0_21360' => 'lsa', 'Lsat_1_v5_gn_2_110721' => 'lsa', 'Lsat_1_v5_gn_2_110801' => 'lsa', 'Lsat_1_v5_gn_2_9800' => 'lsa', 'Lsat_1_v5_gn_3_129101' => 'lsa', 'Lsat_1_v5_gn_3_81881' => 'lsa', 'Lsat_1_v5_gn_5_79581' => 'lsa', 'Lsat_1_v5_gn_5_85441' => 'lsa', 'Lsat_1_v5_gn_6_70320' => 'lsa', 'Lsat_1_v5_gn_6_72241' => 'lsa', 'Lsat_1_v5_gn_7_115600' => 'lsa', 'Lsat_1_v5_gn_7_54581' => 'lsa', 'Lsat_1_v5_gn_8_1281' => 'lsa', 'Lsat_1_v5_gn_8_67661' => 'lsa', 'Lsat_1_v5_gn_9_32960' => 'lsa', 'Lsat_1_v5_gn_9_87640' => 'lsa', 'Lsat_1_v5_gn_9_87680' => 'lsa', 'Manes.01G109200' => 'mes', 'Manes.14G154000' => 'mes', 'Manes.18G058100' => 'mes', 'Manes.18G058200' => 'mes', 'Mapoly0012s0011' => 'mpo', 'Mapoly0159s0022' => 'mpo', 'MBI04_g11121_MAGBIO' => 'mbi', 'MBI14_g17372_MAGBIO' => 'mbi', 'MBI15_g39956_MAGBIO' => 'mbi', 'MBI16_g27571_MAGBIO' => 'mbi', 'MBI16_g39836_MAGBIO' => 'mbi', 'MBI19_g21647_MAGBIO' => 'mbi', 'MBI19_g21649_MAGBIO' => 'mbi', 'MBI19_g21650_MAGBIO' => 'mbi', 'MCO01G527' => 'mco', 'MCO02G064' => 'mco', 'MCO06G260' => 'mco', 'MD08G1199100' => 'mdo', 'MD09G1086400' => 'mdo', 'MD09G1086700' => 'mdo', 'MD09G1087200' => 'mdo', 'MD12G1122800' => 'mdo', 'MD13G1253300' => 'mdo', 'MD15G1386100' => 'mdo', 'MD16G1257600' => 'mdo', 'Medtr1g102950' => 'mtr', 'Medtr3g100160' => 'mtr', 'Medtr4g128020' => 'mtr', 'Medtr7g101180' => 'mtr', 'Medtr7g406970' => 'mtr', 'MELO3C004023.2' => 'cme', 'MELO3C017461.2' => 'cme', 'MELO3C017636.2' => 'cme', 'Migut.J01483' => 'egut', 'Migut.K00241' => 'egut', 'Migut.L00308' => 'egut', 'Migut.N02860' => 'egut', 'MSTRG.10739' => 'ama', 'MSTRG.19708' => 'ama', 'MSTRG.24430' => 'ama', 'MSTRG.6220' => 'ama', 'Nitab4.5_0000131g0220' => 'nta', 'Nitab4.5_0000455g0070' => 'nta', 'Nitab4.5_0001569g0100' => 'nta', 'Nitab4.5_0001972g0020' => 'nta', 'Nitab4.5_0004944g0040' => 'nta', 'Nitab4.5_0005199g0010' => 'nta', 'Nitab4.5_0005913g0030' => 'nta', 'Nn1g05589' => 'nnu', 'Nn2g12771' => 'nnu', 'Nn3g17797' => 'nnu', 'Nn5g29378' => 'nnu', 'Nn5g29871' => 'nnu', 'Nn6g35206' => 'nnu', 'Nn7g37415' => 'nnu', 'Nn8g40480' => 'nnu', 'Oeu009850.1' => 'oeu', 'Oeu012755.1' => 'oeu', 'Oeu025212.1' => 'oeu', 'Oeu033941.2' => 'oeu', 'Oeu042169.1' => 'oeu', 'Oeu044321.1' => 'oeu', 'Oeu056511.1' => 'oeu', 'Oeu064372.1' => 'oeu', 'Os01g0733600' => 'osa', 'Os04g0653400' => 'osa', 'Os07g0496600' => 'osa', 'Os08g0243500' => 'osa', 'Os09g0558900' => 'osa', 'Peaxi162Scf00231g00617' => 'pax', 'Peaxi162Scf00454g00327' => 'pax', 'Peaxi162Scf00814g00241' => 'pax', 'PGR042G0664' => 'pgr', 'PGR042G3763' => 'pgr', 'PGR044G1953' => 'pgr', 'PGSC0003DMG400009340' => 'stu', 'PGSC0003DMG400012672' => 'stu', 'PGSC0003DMG400013779' => 'stu', 'Phvul.003G145400' => 'pvu', 'Phvul.008G004800' => 'pvu', 'Phvul.008G182200' => 'pvu', 'Phvul.009G036200' => 'pvu', 'Potri.002G106566' => 'ptr', 'Potri.002G106632' => 'ptr', 'Potri.004G101100' => 'ptr', 'Potri.005G153800' => 'ptr', 'Potri.006G167200' => 'ptr', 'Potri.011G027100' => 'ptr', 'Potri.018G092100' => 'ptr', 'Pp3c14_22890' => 'ppa', 'Pp3c17_22110' => 'ppa', 'Pp3c20_9680' => 'ppa', 'Pp3c24_17560' => 'ppa', 'Pp3c8_19940' => 'ppa', 'Pp3c9_18000' => 'ppa', 'PRCOL_00000398' => 'pco', 'PRCOL_00003067' => 'pco', 'PRCOL_00005248' => 'pco', 'PRCOL_00006450' => 'pco', 'Prupe.1G085400' => 'ppe', 'Prupe.1G532800' => 'ppe', 'Prupe.3G238300' => 'ppe', 'Psat0s2718g0080' => 'psa', 'Psat3g206240' => 'psa', 'Psat5g046800' => 'psa', 'PSO063G1351' => 'pso', 'PSO170G4160' => 'pso', 'PSO541G2259' => 'pso', 'PSO541G5110' => 'pso', 'PSO566G0159' => 'pso', 'PSO782G4668' => 'pso', 'QL02p051854' => 'qlo', 'QL02p097801' => 'qlo', 'QL09p017878' => 'qlo', 'RcHm_v2.0_Chr1g0334331' => 'rch', 'RcHm_v2.0_Chr2g0162931' => 'rch', 'RcHm_v2.0_Chr4g0402381' => 'rch', 'RcHm_v2.0_Chr4g0402391' => 'rch', 'RcHm_v2.0_Chr4g0419591' => 'rch', 'RcHm_v2.0_Chr5g0020951' => 'rch', 'RcHm_v2.0_Chr6g0289681' => 'rch', 'RcHm_v2.0_Chr7g0226121' => 'rch', 'RcHm_v2.0_Chr7g0233891' => 'rch', 'RcHm_v2.0_Chr7g0235511' => 'rch', 'Rhsim01G0004300' => 'rsi', 'Rhsim02G0050700' => 'rsi', 'Rhsim03G0264500' => 'rsi', 'Rhsim07G0212200' => 'rsi', 'Sabra02G0083900' => 'sbr', 'Sabra04G0079000' => 'sbr', 'Sabra06G0129500' => 'sbr', 'Sabra18G0079200' => 'sbr', 'SalBow1G6327' => 'sbo', 'SalBow5G3175' => 'sbo', 'SalBow6G4447' => 'sbo', 'Sc11g0008260' => 'sci', 'Sc15g0002720' => 'sci', 'Sc18g0007490' => 'sci', 'Sed0012519' => 'sed', 'Sed0013601' => 'sed', 'Sed0019942' => 'sed', 'Sed0024465' => 'sed', 'Sed0028040' => 'sed', 'SEGI_04794' => 'sgi', 'SEGI_24969' => 'sgi', 'SEGI_26800' => 'sgi', 'SEGI_34770' => 'sgi', 'SEGI_38409' => 'sgi', 'SGA_v2.0_scaffold114G32024' => 'sas', 'SGA_v2.0_scaffold12G06070' => 'sas', 'SGA_v2.0_scaffold48G17826' => 'sas', 'SGA_v2.0_scaffold66G22448' => 'sas', 'SGA_v2.0_scaffold69G23252' => 'sas', 'SHI03727' => 'shi', 'SHI03729' => 'shi', 'SHI03732' => 'shi', 'SMO165G0009' => 'smo', 'SMO270G0091' => 'smo', 'SMO367G0652' => 'smo', 'SMO367G1106' => 'smo', 'Solyc02g085820.3' => 'sly', 'Solyc04g076380.4' => 'sly', 'Solyc07g019460.3' => 'sly', 'Sopen00g012550' => 'spe', 'Sopen02g030510' => 'spe', 'Sopen04g030140' => 'spe', 'Sopen07g007920' => 'spe', 'Sp3g01340' => 'spa', 'Sp7g22510' => 'spa', 'Sp7g22520' => 'spa', 'Sp7g28090' => 'spa', 'SpUn0657_0010' => 'spa', 'TAR183G0004' => 'tar', 'TAR314G0003' => 'tar', 'TAR371G1090' => 'tar', 'TAR371G1234' => 'tar', 'TAR381G0764' => 'tar', 'TAR383G0189' => 'tar', 'TAR615G0001' => 'tar', 'TAR625G0662' => 'tar', 'TAR628G0282' => 'tar', 'TAR629G0236' => 'tar', 'TAR636G1193' => 'tar', 'TAR726G0002' => 'tar', 'THA.LOC104799789' => 'tha', 'THA.LOC104801705' => 'tha', 'THA.LOC104803494' => 'tha', 'THA.LOC104803939' => 'tha', 'THA.LOC104806881' => 'tha', 'THA.LOC104819977' => 'tha', 'THA.LOC104820980' => 'tha', 'Thecc.08G071500' => 'tca', 'Thecc.09G177300' => 'tca', 'Thecc.09G259800' => 'tca', 'Thhalv10011322m.g' => 'esa', 'Thhalv10024546m.g' => 'esa', 'Thhalv10024568m.g' => 'esa', 'TPR.G1747' => 'tpr', 'TPR.G33419' => 'tpr', 'TPR.G5394' => 'tpr', 'TPR.G6360' => 'tpr', 'TPR.G9733' => 'tpr', 'TWI32G0568' => 'twi', 'TWI36G0344' => 'twi', 'TWI56G1361' => 'twi', 'TWI63G1242' => 'twi', 'TWI74G0592' => 'twi', 'unitig_21.g20650' => 'ugi', 'unitig_744.g24133' => 'ugi', 'unitig_744.g24134' => 'ugi', 'unitig_746.g26561' => 'ugi', 'unitig_899.g15472' => 'ugi', 'vmacro04647' => 'vma', 'vmacro04660' => 'vma', 'vmacro05566' => 'vma', 'vmacro06013' => 'vma', 'vmacro13126' => 'vma', 'VMungo1215G0106' => 'vmu', 'VMungo1309G0307' => 'vmu', 'VMungo1383G0137' => 'vmu', 'Zm00001eb010260' => 'zma', 'Zm00001eb040630' => 'zma', 'Zm00001eb040640' => 'zma', 'Zm00001eb067960' => 'zma', 'Zm00001eb152230' => 'zma', 'Zm00001eb154050' => 'zma', 'Zm00001eb178320' => 'zma', 'Zm00001eb184590' => 'zma', 'Zm00001eb320430' => 'zma', 'Zm00001eb351140' => 'zma', 'Zm00001eb414620' => 'zma', 'Zm00001eb414630' => 'zma', 'Zm00001eb432420' => 'zma', 'Zm00001eb432450' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001049', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001049' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001049', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '579', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001049' ) ), 'genes' => array( 'A01p07920' => 'bna', 'A01p15880' => 'bna', 'A01p15890' => 'bna', 'A01p22950' => 'bna', 'A01p37190' => 'bna', 'A03p32880' => 'bna', 'A03p55340' => 'bna', 'A03p59610' => 'bna', 'A05p32700' => 'bna', 'A08p19350' => 'bna', 'Aa31LG2G20320' => 'aar', 'Aa31LG4G9620' => 'aar', 'Aa31LG5G12810' => 'aar', 'Aa31LG8G15960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3817' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.439' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1703' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_340.441' => 'aag', 'Actinidia02749' => 'ach', 'Actinidia08191' => 'ach', 'Actinidia08192' => 'ach', 'Actinidia15878' => 'ach', 'Actinidia15879' => 'ach', 'Actinidia19245' => 'ach', 'Actinidia19628' => 'ach', 'Actinidia19831' => 'ach', 'Actinidia27012' => 'ach', 'Actinidia38634' => 'ach', 'Ah.01g008960' => 'amhyb', 'Ah.05g171320' => 'amhyb', 'Ah.09g229840' => 'amhyb', 'Ah.10g037600' => 'amhyb', 'Ah.14g083860' => 'amhyb', 'AL3G11560' => 'aly', 'AL777U10010' => 'aly', 'AL7G21940' => 'aly', 'AL7G28700' => 'aly', 'Aqoxy3G03945' => 'aox', 'Aqoxy6G00858' => 'aox', 'Aqoxy7G03051' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2XG0SD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQAG9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBV3FR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0I0E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPBB19' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXV5G1' => 'arhy', 'AT3G02280' => 'ath', 'AT3G24710' => 'ath', 'AT4G24520' => 'ath', 'AT4G30210' => 'ath', 'ATR0564G081' => 'atr', 'ATR0564G359' => 'atr', 'ATR0580G449' => 'atr', 'Atru.chr13.1005' => 'acertr', 'Atru.chr13.1275' => 'acertr', 'Atru.chr7.1178' => 'acertr', 'Atru.chr7.616' => 'acertr', 'AUR62008979' => 'cqu', 'AUR62014350' => 'cqu', 'AUR62014524' => 'cqu', 'AUR62019093' => 'cqu', 'AUR62021298' => 'cqu', 'AUR62033215' => 'cqu', 'AUR62043530' => 'cqu', 'BcaB01g02067' => 'bca', 'BcaB04g17099' => 'bca', 'BcaB06g26054' => 'bca', 'BcaB06g26057' => 'bca', 'BcaB07g33014' => 'bca', 'BcaB08g34532' => 'bca', 'BcaC01g01164' => 'bca', 'BcaC01g04452' => 'bca', 'BcaC01g04542' => 'bca', 'BcaC05g28232' => 'bca', 'BcaC05g28235' => 'bca', 'BcaC06g32879' => 'bca', 'BcaC07g37699' => 'bca', 'BcaC09g50859' => 'bca', 'BcaC09g50860' => 'bca', 'BcaC09g51804' => 'bca', 'BcaNung00530' => 'bca', 'BcaNung06311' => 'bca', 'BcaNung06377' => 'bca', 'BolC1t00875H' => 'bol', 'BolC1t01910H' => 'bol', 'BolC1t01911H' => 'bol', 'BolC3t16266H' => 'bol', 'BolC3t21192H' => 'bol', 'BolC3t21193H' => 'bol', 'BolC4t24578H' => 'bol', 'BolC5t33015H' => 'bol', 'BolC5t33017H' => 'bol', 'BolC7t45855H' => 'bol', 'BolC7t46229H' => 'bol', 'BolC8t47349H' => 'bol', 'BolC8t48085H' => 'bol', 'BraA01t00738Z' => 'bra', 'BraA01t01522Z' => 'bra', 'BraA01t01523Z' => 'bra', 'BraA01t03780Z' => 'bra', 'BraA03t12457Z' => 'bra', 'BraA03t14593Z' => 'bra', 'BraA03t15018Z' => 'bra', 'BraA08t33896Z' => 'bra', 'C01p08840' => 'bna', 'C01p19820' => 'bna', 'C01p19840' => 'bna', 'C03p40010' => 'bna', 'C03p88810' => 'bna', 'C05p42860' => 'bna', 'C07p53630' => 'bna', 'C07p57650' => 'bna', 'CAN.G1165.2' => 'can', 'CAN.G440.3' => 'can', 'CAN.G475.20' => 'can', 'CAN.G625.5' => 'can', 'CAN.G852.5' => 'can', 'CANSAT11G1186' => 'cansat', 'CANSAT25G1018' => 'cansat', 'CANSAT64G1724' => 'cansat', 'CARHR076240' => 'chi', 'CARHR231910' => 'chi', 'CARHR231920' => 'chi', 'CARHR238120' => 'chi', 'CARHR246570' => 'chi', 'Carub.0003s0139' => 'cru', 'Carub.0003s2478' => 'cru', 'Carub.0007s1040' => 'cru', 'Carub.0007s1655' => 'cru', 'Ca_01353_v3' => 'car', 'Ca_04065_v3' => 'car', 'Ca_21228_v3' => 'car', 'Ca_23435_v3' => 'car', 'CBR_g45849' => 'cbr', 'CBR_g66801' => 'cbr', 'CBR_g76440' => 'cbr', 'Cc06_g13220' => 'ccan', 'Cc07_g08880' => 'ccan', 'Cc10_g15930' => 'ccan', 'CDE02G0228' => 'cde', 'CDE04G0722' => 'cde', 'CDE04G2168' => 'cde', 'CDE05G0709' => 'cde', 'CDE05G0754' => 'cde', 'CDE05G1223' => 'cde', 'CDE05G2069' => 'cde', 'CDE05G2137' => 'cde', 'CDE05G2905' => 'cde', 'CDE07G0189' => 'cde', 'Cfa013502' => 'cfa', 'Cfa013801' => 'cfa', 'Cfa022576' => 'cfa', 'Cfa023262' => 'cfa', 'Cfa023480' => 'cfa', 'Ciclev10000469m.g' => 'ccl', 'Ciclev10000583m.g' => 'ccl', 'Ciclev10007535m.g' => 'ccl', 'CiPaw.04G041100' => 'cil', 'CiPaw.07G192400' => 'cil', 'CiPaw.08G036100' => 'cil', 'CiPaw.08G055900' => 'cil', 'ClCG06G013360' => 'cla', 'ClCG07G017080' => 'cla', 'ClCG11G012150' => 'cla', 'COL.COLO4_25241' => 'col', 'COL.COLO4_25242' => 'col', 'COL.COLO4_35252' => 'col', 'COL.COLO4_37704' => 'col', 'Cpa.g.c29936.1' => 'cpa', 'Cpa.g.sc179.4' => 'cpa', 'Cpa.g.sc21.27' => 'cpa', 'Cpa.g.sc233.8' => 'cpa', 'Cre01.g039350' => 'cre', 'Cre03.g180300' => 'cre', 'Cre12.g551850' => 'cre', 'Cre16.g683550' => 'cre', 'CsaV3_1G031610' => 'csa', 'CsaV3_2G008410' => 'csa', 'CsaV3_4G004300' => 'csa', 'CSS0024879' => 'camsi', 'CSS0032537' => 'camsi', 'CSS0037498' => 'camsi', 'CSS0043035' => 'camsi', 'CSS0049553' => 'camsi', 'DCAR_014700' => 'dca', 'DCAR_017970' => 'dca', 'DCAR_019602' => 'dca', 'DCAR_020124' => 'dca', 'DCAR_029529' => 'dca', 'DCAR_029530' => 'dca', 'Dinv34836' => 'din', 'Dinv41245' => 'din', 'Dinv42608' => 'din', 'Dinv42720' => 'din', 'Dinv43381' => 'din', 'Dinv44863' => 'din', 'Duzib041G0510' => 'dzi', 'Duzib093G0120' => 'dzi', 'Duzib150G0039' => 'dzi', 'Duzib150G1377' => 'dzi', 'Duzib168G0135' => 'dzi', 'Duzib170G0377' => 'dzi', 'ECA234G4507' => 'eca', 'ECA236G0274' => 'eca', 'ECA236G3859' => 'eca', 'ECA238G2427' => 'eca', 'ECA240G1318' => 'eca', 'EL10Ac1g00992' => 'bvu', 'EL10Ac2g04590' => 'bvu', 'EL10Ac8g18281' => 'bvu', 'Eucgr.C00154' => 'egr', 'Eucgr.C02330' => 'egr', 'Eucgr.J01497' => 'egr', 'FAN01G0915' => 'fan', 'FAN02G0215' => 'fan', 'FAN03G1095' => 'fan', 'FAN04G0104' => 'fan', 'FAN05G1438' => 'fan', 'FAN07G2539' => 'fan', 'FAN08G0165' => 'fan', 'FAN09G1302' => 'fan', 'FAN10G0721' => 'fan', 'FAN11G1854' => 'fan', 'FAN12G1664' => 'fan', 'FAN13G3329' => 'fan', 'FAN14G1155' => 'fan', 'FAN14G2476' => 'fan', 'FAN17G0476' => 'fan', 'FAN18G0905' => 'fan', 'FAN18G0950' => 'fan', 'FAN19G0265' => 'fan', 'FAN22G1504' => 'fan', 'FvH4_1g29080' => 'fve', 'FvH4_3g26990' => 'fve', 'FvH4_4g08180' => 'fve', 'FvH4_5g10660' => 'fve', 'FvH4_5g34830' => 'fve', 'FvH4_6g45220' => 'fve', 'FvH4_7g05330' => 'fve', 'FvH4_7g05331' => 'fve', 'Glyma.02G160251' => 'gma', 'Glyma.02G214700' => 'gma', 'Glyma.04G095500' => 'gma', 'Glyma.06G097200' => 'gma', 'Glyma.08G364302' => 'gma', 'Glyma.13G096500' => 'gma', 'Glyma.14G182100' => 'gma', 'Glyma.17G063000' => 'gma', 'Glyma.18G297800' => 'gma', 'Gohir.A01G126300' => 'ghi', 'Gohir.A05G004900' => 'ghi', 'Gohir.A05G219300' => 'ghi', 'Gohir.A05G360900' => 'ghi', 'Gohir.A07G116600' => 'ghi', 'Gohir.A08G023216' => 'ghi', 'Gohir.A08G023408' => 'ghi', 'Gohir.A08G023416' => 'ghi', 'Gohir.D01G113900' => 'ghi', 'Gohir.D04G100432' => 'ghi', 'Gohir.D04G111100' => 'ghi', 'Gohir.D05G005800' => 'ghi', 'Gohir.D05G221900' => 'ghi', 'Gohir.D07G121000' => 'ghi', 'Gohir.D08G034000' => 'ghi', 'Gohir.D08G111608' => 'ghi', 'Gohir.D10G139266' => 'ghi', 'Gohir.D11G131600' => 'ghi', 'Gohir.D11G228980' => 'ghi', 'Gorai.001G130600' => 'gra', 'Gorai.002G138900' => 'gra', 'Gorai.004G031600' => 'gra', 'Gorai.004G119600' => 'gra', 'Gorai.006G045500' => 'gra', 'Gorai.009G005600' => 'gra', 'Gorai.009G229300' => 'gra', 'GSVIVG01009185001' => 'vvi', 'GSVIVG01014384001' => 'vvi', 'GSVIVG01014385001' => 'vvi', 'GSVIVG01029213001' => 'vvi', 'GSVIVG01031054001' => 'vvi', 'HanXRQChr02g0034591' => 'han', 'HanXRQChr05g0142991' => 'han', 'HanXRQChr09g0244761' => 'han', 'HanXRQChr09g0254451' => 'han', 'HanXRQChr09g0255411' => 'han', 'HanXRQChr12g0358291' => 'han', 'HanXRQChr12g0358301' => 'han', 'HanXRQChr12g0365411' => 'han', 'HanXRQChr12g0376471' => 'han', 'HanXRQChr13g0412341' => 'han', 'HanXRQChr14g0429191' => 'han', 'Haze_22094' => 'cav', 'Haze_22464' => 'cav', 'Hma1.2p1_0125F.1_g058820' => 'hma', 'Hma1.2p1_0550F.1_g177330' => 'hma', 'Hma1.2p1_1025F.1_g249330' => 'hma', 'Hma1.2p1_3581F.1_g336840' => 'hma', 'HPP92_003525' => 'vpl', 'HPP92_005481' => 'vpl', 'HPP92_010748' => 'vpl', 'HPP92_015367' => 'vpl', 'HPP92_018334' => 'vpl', 'HPP92_018376' => 'vpl', 'Hund01739' => 'sun', 'Hund09029' => 'sun', 'Hund13726' => 'sun', 'Hund17286' => 'sun', 'Hund26351' => 'sun', 'Hund26816' => 'sun', 'Lalb_Chr04g0252811' => 'lal', 'Lalb_Chr07g0180491' => 'lal', 'Lalb_Chr08g0242561' => 'lal', 'Lalb_Chr10g0091161' => 'lal', 'Lalb_Chr11g0064941' => 'lal', 'Lalb_Chr12g0199431' => 'lal', 'Lj1g0009282' => 'lja', 'Lj1g0012839' => 'lja', 'Lj1g0028233' => 'lja', 'Lj4C194T12' => 'lonja', 'Lj4C717G5' => 'lonja', 'Lj4C738G5' => 'lonja', 'Lj4g0000806' => 'lja', 'Lj4g0009595' => 'lja', 'Lj5A7T12' => 'lonja', 'Lj6g0008823' => 'lja', 'Lj6g0018247' => 'lja', 'Lj9A24T28' => 'lonja', 'Lj9C26T2' => 'lonja', 'Lsat_1_v5_gn_0_21360' => 'lsa', 'Lsat_1_v5_gn_2_110721' => 'lsa', 'Lsat_1_v5_gn_2_110801' => 'lsa', 'Lsat_1_v5_gn_2_9800' => 'lsa', 'Lsat_1_v5_gn_3_129101' => 'lsa', 'Lsat_1_v5_gn_3_81881' => 'lsa', 'Lsat_1_v5_gn_5_79581' => 'lsa', 'Lsat_1_v5_gn_5_85441' => 'lsa', 'Lsat_1_v5_gn_6_70320' => 'lsa', 'Lsat_1_v5_gn_6_72241' => 'lsa', 'Lsat_1_v5_gn_7_115600' => 'lsa', 'Lsat_1_v5_gn_7_54581' => 'lsa', 'Lsat_1_v5_gn_8_1281' => 'lsa', 'Lsat_1_v5_gn_8_67661' => 'lsa', 'Lsat_1_v5_gn_9_32960' => 'lsa', 'Lsat_1_v5_gn_9_87640' => 'lsa', 'Lsat_1_v5_gn_9_87680' => 'lsa', 'Manes.01G109200' => 'mes', 'Manes.14G154000' => 'mes', 'Manes.18G058100' => 'mes', 'Manes.18G058200' => 'mes', 'Mapoly0012s0011' => 'mpo', 'Mapoly0159s0022' => 'mpo', 'MBI04_g11121_MAGBIO' => 'mbi', 'MBI14_g17372_MAGBIO' => 'mbi', 'MBI15_g39956_MAGBIO' => 'mbi', 'MBI16_g27571_MAGBIO' => 'mbi', 'MBI16_g39836_MAGBIO' => 'mbi', 'MBI19_g21647_MAGBIO' => 'mbi', 'MBI19_g21649_MAGBIO' => 'mbi', 'MBI19_g21650_MAGBIO' => 'mbi', 'MCO01G527' => 'mco', 'MCO02G064' => 'mco', 'MCO06G260' => 'mco', 'MD08G1199100' => 'mdo', 'MD09G1086400' => 'mdo', 'MD09G1086700' => 'mdo', 'MD09G1087200' => 'mdo', 'MD12G1122800' => 'mdo', 'MD13G1253300' => 'mdo', 'MD15G1386100' => 'mdo', 'MD16G1257600' => 'mdo', 'Medtr1g102950' => 'mtr', 'Medtr3g100160' => 'mtr', 'Medtr4g128020' => 'mtr', 'Medtr7g101180' => 'mtr', 'Medtr7g406970' => 'mtr', 'MELO3C004023.2' => 'cme', 'MELO3C017461.2' => 'cme', 'MELO3C017636.2' => 'cme', 'Migut.J01483' => 'egut', 'Migut.K00241' => 'egut', 'Migut.L00308' => 'egut', 'Migut.N02860' => 'egut', 'MSTRG.10739' => 'ama', 'MSTRG.19708' => 'ama', 'MSTRG.24430' => 'ama', 'MSTRG.6220' => 'ama', 'Nitab4.5_0000131g0220' => 'nta', 'Nitab4.5_0000455g0070' => 'nta', 'Nitab4.5_0001569g0100' => 'nta', 'Nitab4.5_0001972g0020' => 'nta', 'Nitab4.5_0004944g0040' => 'nta', 'Nitab4.5_0005199g0010' => 'nta', 'Nitab4.5_0005913g0030' => 'nta', 'Nn1g05589' => 'nnu', 'Nn2g12771' => 'nnu', 'Nn3g17797' => 'nnu', 'Nn5g29378' => 'nnu', 'Nn5g29871' => 'nnu', 'Nn6g35206' => 'nnu', 'Nn7g37415' => 'nnu', 'Nn8g40480' => 'nnu', 'Oeu009850.1' => 'oeu', 'Oeu012755.1' => 'oeu', 'Oeu025212.1' => 'oeu', 'Oeu033941.2' => 'oeu', 'Oeu042169.1' => 'oeu', 'Oeu044321.1' => 'oeu', 'Oeu056511.1' => 'oeu', 'Oeu064372.1' => 'oeu', 'Os01g0733600' => 'osa', 'Os04g0653400' => 'osa', 'Os07g0496600' => 'osa', 'Os08g0243500' => 'osa', 'Os09g0558900' => 'osa', 'Peaxi162Scf00231g00617' => 'pax', 'Peaxi162Scf00454g00327' => 'pax', 'Peaxi162Scf00814g00241' => 'pax', 'PGR042G0664' => 'pgr', 'PGR042G3763' => 'pgr', 'PGR044G1953' => 'pgr', 'PGSC0003DMG400009340' => 'stu', 'PGSC0003DMG400012672' => 'stu', 'PGSC0003DMG400013779' => 'stu', 'Phvul.003G145400' => 'pvu', 'Phvul.008G004800' => 'pvu', 'Phvul.008G182200' => 'pvu', 'Phvul.009G036200' => 'pvu', 'Potri.002G106566' => 'ptr', 'Potri.002G106632' => 'ptr', 'Potri.004G101100' => 'ptr', 'Potri.005G153800' => 'ptr', 'Potri.006G167200' => 'ptr', 'Potri.011G027100' => 'ptr', 'Potri.018G092100' => 'ptr', 'Pp3c14_22890' => 'ppa', 'Pp3c17_22110' => 'ppa', 'Pp3c20_9680' => 'ppa', 'Pp3c24_17560' => 'ppa', 'Pp3c8_19940' => 'ppa', 'Pp3c9_18000' => 'ppa', 'PRCOL_00000398' => 'pco', 'PRCOL_00003067' => 'pco', 'PRCOL_00005248' => 'pco', 'PRCOL_00006450' => 'pco', 'Prupe.1G085400' => 'ppe', 'Prupe.1G532800' => 'ppe', 'Prupe.3G238300' => 'ppe', 'Psat0s2718g0080' => 'psa', 'Psat3g206240' => 'psa', 'Psat5g046800' => 'psa', 'PSO063G1351' => 'pso', 'PSO170G4160' => 'pso', 'PSO541G2259' => 'pso', 'PSO541G5110' => 'pso', 'PSO566G0159' => 'pso', 'PSO782G4668' => 'pso', 'QL02p051854' => 'qlo', 'QL02p097801' => 'qlo', 'QL09p017878' => 'qlo', 'RcHm_v2.0_Chr1g0334331' => 'rch', 'RcHm_v2.0_Chr2g0162931' => 'rch', 'RcHm_v2.0_Chr4g0402381' => 'rch', 'RcHm_v2.0_Chr4g0402391' => 'rch', 'RcHm_v2.0_Chr4g0419591' => 'rch', 'RcHm_v2.0_Chr5g0020951' => 'rch', 'RcHm_v2.0_Chr6g0289681' => 'rch', 'RcHm_v2.0_Chr7g0226121' => 'rch', 'RcHm_v2.0_Chr7g0233891' => 'rch', 'RcHm_v2.0_Chr7g0235511' => 'rch', 'Rhsim01G0004300' => 'rsi', 'Rhsim02G0050700' => 'rsi', 'Rhsim03G0264500' => 'rsi', 'Rhsim07G0212200' => 'rsi', 'Sabra02G0083900' => 'sbr', 'Sabra04G0079000' => 'sbr', 'Sabra06G0129500' => 'sbr', 'Sabra18G0079200' => 'sbr', 'SalBow1G6327' => 'sbo', 'SalBow5G3175' => 'sbo', 'SalBow6G4447' => 'sbo', 'Sc11g0008260' => 'sci', 'Sc15g0002720' => 'sci', 'Sc18g0007490' => 'sci', 'Sed0012519' => 'sed', 'Sed0013601' => 'sed', 'Sed0019942' => 'sed', 'Sed0024465' => 'sed', 'Sed0028040' => 'sed', 'SEGI_04794' => 'sgi', 'SEGI_24969' => 'sgi', 'SEGI_26800' => 'sgi', 'SEGI_34770' => 'sgi', 'SEGI_38409' => 'sgi', 'SGA_v2.0_scaffold114G32024' => 'sas', 'SGA_v2.0_scaffold12G06070' => 'sas', 'SGA_v2.0_scaffold48G17826' => 'sas', 'SGA_v2.0_scaffold66G22448' => 'sas', 'SGA_v2.0_scaffold69G23252' => 'sas', 'SHI03727' => 'shi', 'SHI03729' => 'shi', 'SHI03732' => 'shi', 'SMO165G0009' => 'smo', 'SMO270G0091' => 'smo', 'SMO367G0652' => 'smo', 'SMO367G1106' => 'smo', 'Solyc02g085820.3' => 'sly', 'Solyc04g076380.4' => 'sly', 'Solyc07g019460.3' => 'sly', 'Sopen00g012550' => 'spe', 'Sopen02g030510' => 'spe', 'Sopen04g030140' => 'spe', 'Sopen07g007920' => 'spe', 'Sp3g01340' => 'spa', 'Sp7g22510' => 'spa', 'Sp7g22520' => 'spa', 'Sp7g28090' => 'spa', 'SpUn0657_0010' => 'spa', 'TAR183G0004' => 'tar', 'TAR314G0003' => 'tar', 'TAR371G1090' => 'tar', 'TAR371G1234' => 'tar', 'TAR381G0764' => 'tar', 'TAR383G0189' => 'tar', 'TAR615G0001' => 'tar', 'TAR625G0662' => 'tar', 'TAR628G0282' => 'tar', 'TAR629G0236' => 'tar', 'TAR636G1193' => 'tar', 'TAR726G0002' => 'tar', 'THA.LOC104799789' => 'tha', 'THA.LOC104801705' => 'tha', 'THA.LOC104803494' => 'tha', 'THA.LOC104803939' => 'tha', 'THA.LOC104806881' => 'tha', 'THA.LOC104819977' => 'tha', 'THA.LOC104820980' => 'tha', 'Thecc.08G071500' => 'tca', 'Thecc.09G177300' => 'tca', 'Thecc.09G259800' => 'tca', 'Thhalv10011322m.g' => 'esa', 'Thhalv10024546m.g' => 'esa', 'Thhalv10024568m.g' => 'esa', 'TPR.G1747' => 'tpr', 'TPR.G33419' => 'tpr', 'TPR.G5394' => 'tpr', 'TPR.G6360' => 'tpr', 'TPR.G9733' => 'tpr', 'TWI32G0568' => 'twi', 'TWI36G0344' => 'twi', 'TWI56G1361' => 'twi', 'TWI63G1242' => 'twi', 'TWI74G0592' => 'twi', 'unitig_21.g20650' => 'ugi', 'unitig_744.g24133' => 'ugi', 'unitig_744.g24134' => 'ugi', 'unitig_746.g26561' => 'ugi', 'unitig_899.g15472' => 'ugi', 'vmacro04647' => 'vma', 'vmacro04660' => 'vma', 'vmacro05566' => 'vma', 'vmacro06013' => 'vma', 'vmacro13126' => 'vma', 'VMungo1215G0106' => 'vmu', 'VMungo1309G0307' => 'vmu', 'VMungo1383G0137' => 'vmu', 'Zm00001eb010260' => 'zma', 'Zm00001eb040630' => 'zma', 'Zm00001eb040640' => 'zma', 'Zm00001eb067960' => 'zma', 'Zm00001eb152230' => 'zma', 'Zm00001eb154050' => 'zma', 'Zm00001eb178320' => 'zma', 'Zm00001eb184590' => 'zma', 'Zm00001eb320430' => 'zma', 'Zm00001eb351140' => 'zma', 'Zm00001eb414620' => 'zma', 'Zm00001eb414630' => 'zma', 'Zm00001eb432420' => 'zma', 'Zm00001eb432450' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001049' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001049' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001049' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001049' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001049', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '579', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p07920' => 'bna', 'A01p15880' => 'bna', 'A01p15890' => 'bna', 'A01p22950' => 'bna', 'A01p37190' => 'bna', 'A03p32880' => 'bna', 'A03p55340' => 'bna', 'A03p59610' => 'bna', 'A05p32700' => 'bna', 'A08p19350' => 'bna', 'Aa31LG2G20320' => 'aar', 'Aa31LG4G9620' => 'aar', 'Aa31LG5G12810' => 'aar', 'Aa31LG8G15960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3817' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.439' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1703' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_340.441' => 'aag', 'Actinidia02749' => 'ach', 'Actinidia08191' => 'ach', 'Actinidia08192' => 'ach', 'Actinidia15878' => 'ach', 'Actinidia15879' => 'ach', 'Actinidia19245' => 'ach', 'Actinidia19628' => 'ach', 'Actinidia19831' => 'ach', 'Actinidia27012' => 'ach', 'Actinidia38634' => 'ach', 'Ah.01g008960' => 'amhyb', 'Ah.05g171320' => 'amhyb', 'Ah.09g229840' => 'amhyb', 'Ah.10g037600' => 'amhyb', 'Ah.14g083860' => 'amhyb', 'AL3G11560' => 'aly', 'AL777U10010' => 'aly', 'AL7G21940' => 'aly', 'AL7G28700' => 'aly', 'Aqoxy3G03945' => 'aox', 'Aqoxy6G00858' => 'aox', 'Aqoxy7G03051' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2XG0SD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQAG9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBV3FR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0I0E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPBB19' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXV5G1' => 'arhy', 'AT3G02280' => 'ath', 'AT3G24710' => 'ath', 'AT4G24520' => 'ath', 'AT4G30210' => 'ath', 'ATR0564G081' => 'atr', 'ATR0564G359' => 'atr', 'ATR0580G449' => 'atr', 'Atru.chr13.1005' => 'acertr', 'Atru.chr13.1275' => 'acertr', 'Atru.chr7.1178' => 'acertr', 'Atru.chr7.616' => 'acertr', 'AUR62008979' => 'cqu', 'AUR62014350' => 'cqu', 'AUR62014524' => 'cqu', 'AUR62019093' => 'cqu', 'AUR62021298' => 'cqu', 'AUR62033215' => 'cqu', 'AUR62043530' => 'cqu', 'BcaB01g02067' => 'bca', 'BcaB04g17099' => 'bca', 'BcaB06g26054' => 'bca', 'BcaB06g26057' => 'bca', 'BcaB07g33014' => 'bca', 'BcaB08g34532' => 'bca', 'BcaC01g01164' => 'bca', 'BcaC01g04452' => 'bca', 'BcaC01g04542' => 'bca', 'BcaC05g28232' => 'bca', 'BcaC05g28235' => 'bca', 'BcaC06g32879' => 'bca', 'BcaC07g37699' => 'bca', 'BcaC09g50859' => 'bca', 'BcaC09g50860' => 'bca', 'BcaC09g51804' => 'bca', 'BcaNung00530' => 'bca', 'BcaNung06311' => 'bca', 'BcaNung06377' => 'bca', 'BolC1t00875H' => 'bol', 'BolC1t01910H' => 'bol', 'BolC1t01911H' => 'bol', 'BolC3t16266H' => 'bol', 'BolC3t21192H' => 'bol', 'BolC3t21193H' => 'bol', 'BolC4t24578H' => 'bol', 'BolC5t33015H' => 'bol', 'BolC5t33017H' => 'bol', 'BolC7t45855H' => 'bol', 'BolC7t46229H' => 'bol', 'BolC8t47349H' => 'bol', 'BolC8t48085H' => 'bol', 'BraA01t00738Z' => 'bra', 'BraA01t01522Z' => 'bra', 'BraA01t01523Z' => 'bra', 'BraA01t03780Z' => 'bra', 'BraA03t12457Z' => 'bra', 'BraA03t14593Z' => 'bra', 'BraA03t15018Z' => 'bra', 'BraA08t33896Z' => 'bra', 'C01p08840' => 'bna', 'C01p19820' => 'bna', 'C01p19840' => 'bna', 'C03p40010' => 'bna', 'C03p88810' => 'bna', 'C05p42860' => 'bna', 'C07p53630' => 'bna', 'C07p57650' => 'bna', 'CAN.G1165.2' => 'can', 'CAN.G440.3' => 'can', 'CAN.G475.20' => 'can', 'CAN.G625.5' => 'can', 'CAN.G852.5' => 'can', 'CANSAT11G1186' => 'cansat', 'CANSAT25G1018' => 'cansat', 'CANSAT64G1724' => 'cansat', 'CARHR076240' => 'chi', 'CARHR231910' => 'chi', 'CARHR231920' => 'chi', 'CARHR238120' => 'chi', 'CARHR246570' => 'chi', 'Carub.0003s0139' => 'cru', 'Carub.0003s2478' => 'cru', 'Carub.0007s1040' => 'cru', 'Carub.0007s1655' => 'cru', 'Ca_01353_v3' => 'car', 'Ca_04065_v3' => 'car', 'Ca_21228_v3' => 'car', 'Ca_23435_v3' => 'car', 'CBR_g45849' => 'cbr', 'CBR_g66801' => 'cbr', 'CBR_g76440' => 'cbr', 'Cc06_g13220' => 'ccan', 'Cc07_g08880' => 'ccan', 'Cc10_g15930' => 'ccan', 'CDE02G0228' => 'cde', 'CDE04G0722' => 'cde', 'CDE04G2168' => 'cde', 'CDE05G0709' => 'cde', 'CDE05G0754' => 'cde', 'CDE05G1223' => 'cde', 'CDE05G2069' => 'cde', 'CDE05G2137' => 'cde', 'CDE05G2905' => 'cde', 'CDE07G0189' => 'cde', 'Cfa013502' => 'cfa', 'Cfa013801' => 'cfa', 'Cfa022576' => 'cfa', 'Cfa023262' => 'cfa', 'Cfa023480' => 'cfa', 'Ciclev10000469m.g' => 'ccl', 'Ciclev10000583m.g' => 'ccl', 'Ciclev10007535m.g' => 'ccl', 'CiPaw.04G041100' => 'cil', 'CiPaw.07G192400' => 'cil', 'CiPaw.08G036100' => 'cil', 'CiPaw.08G055900' => 'cil', 'ClCG06G013360' => 'cla', 'ClCG07G017080' => 'cla', 'ClCG11G012150' => 'cla', 'COL.COLO4_25241' => 'col', 'COL.COLO4_25242' => 'col', 'COL.COLO4_35252' => 'col', 'COL.COLO4_37704' => 'col', 'Cpa.g.c29936.1' => 'cpa', 'Cpa.g.sc179.4' => 'cpa', 'Cpa.g.sc21.27' => 'cpa', 'Cpa.g.sc233.8' => 'cpa', 'Cre01.g039350' => 'cre', 'Cre03.g180300' => 'cre', 'Cre12.g551850' => 'cre', 'Cre16.g683550' => 'cre', 'CsaV3_1G031610' => 'csa', 'CsaV3_2G008410' => 'csa', 'CsaV3_4G004300' => 'csa', 'CSS0024879' => 'camsi', 'CSS0032537' => 'camsi', 'CSS0037498' => 'camsi', 'CSS0043035' => 'camsi', 'CSS0049553' => 'camsi', 'DCAR_014700' => 'dca', 'DCAR_017970' => 'dca', 'DCAR_019602' => 'dca', 'DCAR_020124' => 'dca', 'DCAR_029529' => 'dca', 'DCAR_029530' => 'dca', 'Dinv34836' => 'din', 'Dinv41245' => 'din', 'Dinv42608' => 'din', 'Dinv42720' => 'din', 'Dinv43381' => 'din', 'Dinv44863' => 'din', 'Duzib041G0510' => 'dzi', 'Duzib093G0120' => 'dzi', 'Duzib150G0039' => 'dzi', 'Duzib150G1377' => 'dzi', 'Duzib168G0135' => 'dzi', 'Duzib170G0377' => 'dzi', 'ECA234G4507' => 'eca', 'ECA236G0274' => 'eca', 'ECA236G3859' => 'eca', 'ECA238G2427' => 'eca', 'ECA240G1318' => 'eca', 'EL10Ac1g00992' => 'bvu', 'EL10Ac2g04590' => 'bvu', 'EL10Ac8g18281' => 'bvu', 'Eucgr.C00154' => 'egr', 'Eucgr.C02330' => 'egr', 'Eucgr.J01497' => 'egr', 'FAN01G0915' => 'fan', 'FAN02G0215' => 'fan', 'FAN03G1095' => 'fan', 'FAN04G0104' => 'fan', 'FAN05G1438' => 'fan', 'FAN07G2539' => 'fan', 'FAN08G0165' => 'fan', 'FAN09G1302' => 'fan', 'FAN10G0721' => 'fan', 'FAN11G1854' => 'fan', 'FAN12G1664' => 'fan', 'FAN13G3329' => 'fan', 'FAN14G1155' => 'fan', 'FAN14G2476' => 'fan', 'FAN17G0476' => 'fan', 'FAN18G0905' => 'fan', 'FAN18G0950' => 'fan', 'FAN19G0265' => 'fan', 'FAN22G1504' => 'fan', 'FvH4_1g29080' => 'fve', 'FvH4_3g26990' => 'fve', 'FvH4_4g08180' => 'fve', 'FvH4_5g10660' => 'fve', 'FvH4_5g34830' => 'fve', 'FvH4_6g45220' => 'fve', 'FvH4_7g05330' => 'fve', 'FvH4_7g05331' => 'fve', 'Glyma.02G160251' => 'gma', 'Glyma.02G214700' => 'gma', 'Glyma.04G095500' => 'gma', 'Glyma.06G097200' => 'gma', 'Glyma.08G364302' => 'gma', 'Glyma.13G096500' => 'gma', 'Glyma.14G182100' => 'gma', 'Glyma.17G063000' => 'gma', 'Glyma.18G297800' => 'gma', 'Gohir.A01G126300' => 'ghi', 'Gohir.A05G004900' => 'ghi', 'Gohir.A05G219300' => 'ghi', 'Gohir.A05G360900' => 'ghi', 'Gohir.A07G116600' => 'ghi', 'Gohir.A08G023216' => 'ghi', 'Gohir.A08G023408' => 'ghi', 'Gohir.A08G023416' => 'ghi', 'Gohir.D01G113900' => 'ghi', 'Gohir.D04G100432' => 'ghi', 'Gohir.D04G111100' => 'ghi', 'Gohir.D05G005800' => 'ghi', 'Gohir.D05G221900' => 'ghi', 'Gohir.D07G121000' => 'ghi', 'Gohir.D08G034000' => 'ghi', 'Gohir.D08G111608' => 'ghi', 'Gohir.D10G139266' => 'ghi', 'Gohir.D11G131600' => 'ghi', 'Gohir.D11G228980' => 'ghi', 'Gorai.001G130600' => 'gra', 'Gorai.002G138900' => 'gra', 'Gorai.004G031600' => 'gra', 'Gorai.004G119600' => 'gra', 'Gorai.006G045500' => 'gra', 'Gorai.009G005600' => 'gra', 'Gorai.009G229300' => 'gra', 'GSVIVG01009185001' => 'vvi', 'GSVIVG01014384001' => 'vvi', 'GSVIVG01014385001' => 'vvi', 'GSVIVG01029213001' => 'vvi', 'GSVIVG01031054001' => 'vvi', 'HanXRQChr02g0034591' => 'han', 'HanXRQChr05g0142991' => 'han', 'HanXRQChr09g0244761' => 'han', 'HanXRQChr09g0254451' => 'han', 'HanXRQChr09g0255411' => 'han', 'HanXRQChr12g0358291' => 'han', 'HanXRQChr12g0358301' => 'han', 'HanXRQChr12g0365411' => 'han', 'HanXRQChr12g0376471' => 'han', 'HanXRQChr13g0412341' => 'han', 'HanXRQChr14g0429191' => 'han', 'Haze_22094' => 'cav', 'Haze_22464' => 'cav', 'Hma1.2p1_0125F.1_g058820' => 'hma', 'Hma1.2p1_0550F.1_g177330' => 'hma', 'Hma1.2p1_1025F.1_g249330' => 'hma', 'Hma1.2p1_3581F.1_g336840' => 'hma', 'HPP92_003525' => 'vpl', 'HPP92_005481' => 'vpl', 'HPP92_010748' => 'vpl', 'HPP92_015367' => 'vpl', 'HPP92_018334' => 'vpl', 'HPP92_018376' => 'vpl', 'Hund01739' => 'sun', 'Hund09029' => 'sun', 'Hund13726' => 'sun', 'Hund17286' => 'sun', 'Hund26351' => 'sun', 'Hund26816' => 'sun', 'Lalb_Chr04g0252811' => 'lal', 'Lalb_Chr07g0180491' => 'lal', 'Lalb_Chr08g0242561' => 'lal', 'Lalb_Chr10g0091161' => 'lal', 'Lalb_Chr11g0064941' => 'lal', 'Lalb_Chr12g0199431' => 'lal', 'Lj1g0009282' => 'lja', 'Lj1g0012839' => 'lja', 'Lj1g0028233' => 'lja', 'Lj4C194T12' => 'lonja', 'Lj4C717G5' => 'lonja', 'Lj4C738G5' => 'lonja', 'Lj4g0000806' => 'lja', 'Lj4g0009595' => 'lja', 'Lj5A7T12' => 'lonja', 'Lj6g0008823' => 'lja', 'Lj6g0018247' => 'lja', 'Lj9A24T28' => 'lonja', 'Lj9C26T2' => 'lonja', 'Lsat_1_v5_gn_0_21360' => 'lsa', 'Lsat_1_v5_gn_2_110721' => 'lsa', 'Lsat_1_v5_gn_2_110801' => 'lsa', 'Lsat_1_v5_gn_2_9800' => 'lsa', 'Lsat_1_v5_gn_3_129101' => 'lsa', 'Lsat_1_v5_gn_3_81881' => 'lsa', 'Lsat_1_v5_gn_5_79581' => 'lsa', 'Lsat_1_v5_gn_5_85441' => 'lsa', 'Lsat_1_v5_gn_6_70320' => 'lsa', 'Lsat_1_v5_gn_6_72241' => 'lsa', 'Lsat_1_v5_gn_7_115600' => 'lsa', 'Lsat_1_v5_gn_7_54581' => 'lsa', 'Lsat_1_v5_gn_8_1281' => 'lsa', 'Lsat_1_v5_gn_8_67661' => 'lsa', 'Lsat_1_v5_gn_9_32960' => 'lsa', 'Lsat_1_v5_gn_9_87640' => 'lsa', 'Lsat_1_v5_gn_9_87680' => 'lsa', 'Manes.01G109200' => 'mes', 'Manes.14G154000' => 'mes', 'Manes.18G058100' => 'mes', 'Manes.18G058200' => 'mes', 'Mapoly0012s0011' => 'mpo', 'Mapoly0159s0022' => 'mpo', 'MBI04_g11121_MAGBIO' => 'mbi', 'MBI14_g17372_MAGBIO' => 'mbi', 'MBI15_g39956_MAGBIO' => 'mbi', 'MBI16_g27571_MAGBIO' => 'mbi', 'MBI16_g39836_MAGBIO' => 'mbi', 'MBI19_g21647_MAGBIO' => 'mbi', 'MBI19_g21649_MAGBIO' => 'mbi', 'MBI19_g21650_MAGBIO' => 'mbi', 'MCO01G527' => 'mco', 'MCO02G064' => 'mco', 'MCO06G260' => 'mco', 'MD08G1199100' => 'mdo', 'MD09G1086400' => 'mdo', 'MD09G1086700' => 'mdo', 'MD09G1087200' => 'mdo', 'MD12G1122800' => 'mdo', 'MD13G1253300' => 'mdo', 'MD15G1386100' => 'mdo', 'MD16G1257600' => 'mdo', 'Medtr1g102950' => 'mtr', 'Medtr3g100160' => 'mtr', 'Medtr4g128020' => 'mtr', 'Medtr7g101180' => 'mtr', 'Medtr7g406970' => 'mtr', 'MELO3C004023.2' => 'cme', 'MELO3C017461.2' => 'cme', 'MELO3C017636.2' => 'cme', 'Migut.J01483' => 'egut', 'Migut.K00241' => 'egut', 'Migut.L00308' => 'egut', 'Migut.N02860' => 'egut', 'MSTRG.10739' => 'ama', 'MSTRG.19708' => 'ama', 'MSTRG.24430' => 'ama', 'MSTRG.6220' => 'ama', 'Nitab4.5_0000131g0220' => 'nta', 'Nitab4.5_0000455g0070' => 'nta', 'Nitab4.5_0001569g0100' => 'nta', 'Nitab4.5_0001972g0020' => 'nta', 'Nitab4.5_0004944g0040' => 'nta', 'Nitab4.5_0005199g0010' => 'nta', 'Nitab4.5_0005913g0030' => 'nta', 'Nn1g05589' => 'nnu', 'Nn2g12771' => 'nnu', 'Nn3g17797' => 'nnu', 'Nn5g29378' => 'nnu', 'Nn5g29871' => 'nnu', 'Nn6g35206' => 'nnu', 'Nn7g37415' => 'nnu', 'Nn8g40480' => 'nnu', 'Oeu009850.1' => 'oeu', 'Oeu012755.1' => 'oeu', 'Oeu025212.1' => 'oeu', 'Oeu033941.2' => 'oeu', 'Oeu042169.1' => 'oeu', 'Oeu044321.1' => 'oeu', 'Oeu056511.1' => 'oeu', 'Oeu064372.1' => 'oeu', 'Os01g0733600' => 'osa', 'Os04g0653400' => 'osa', 'Os07g0496600' => 'osa', 'Os08g0243500' => 'osa', 'Os09g0558900' => 'osa', 'Peaxi162Scf00231g00617' => 'pax', 'Peaxi162Scf00454g00327' => 'pax', 'Peaxi162Scf00814g00241' => 'pax', 'PGR042G0664' => 'pgr', 'PGR042G3763' => 'pgr', 'PGR044G1953' => 'pgr', 'PGSC0003DMG400009340' => 'stu', 'PGSC0003DMG400012672' => 'stu', 'PGSC0003DMG400013779' => 'stu', 'Phvul.003G145400' => 'pvu', 'Phvul.008G004800' => 'pvu', 'Phvul.008G182200' => 'pvu', 'Phvul.009G036200' => 'pvu', 'Potri.002G106566' => 'ptr', 'Potri.002G106632' => 'ptr', 'Potri.004G101100' => 'ptr', 'Potri.005G153800' => 'ptr', 'Potri.006G167200' => 'ptr', 'Potri.011G027100' => 'ptr', 'Potri.018G092100' => 'ptr', 'Pp3c14_22890' => 'ppa', 'Pp3c17_22110' => 'ppa', 'Pp3c20_9680' => 'ppa', 'Pp3c24_17560' => 'ppa', 'Pp3c8_19940' => 'ppa', 'Pp3c9_18000' => 'ppa', 'PRCOL_00000398' => 'pco', 'PRCOL_00003067' => 'pco', 'PRCOL_00005248' => 'pco', 'PRCOL_00006450' => 'pco', 'Prupe.1G085400' => 'ppe', 'Prupe.1G532800' => 'ppe', 'Prupe.3G238300' => 'ppe', 'Psat0s2718g0080' => 'psa', 'Psat3g206240' => 'psa', 'Psat5g046800' => 'psa', 'PSO063G1351' => 'pso', 'PSO170G4160' => 'pso', 'PSO541G2259' => 'pso', 'PSO541G5110' => 'pso', 'PSO566G0159' => 'pso', 'PSO782G4668' => 'pso', 'QL02p051854' => 'qlo', 'QL02p097801' => 'qlo', 'QL09p017878' => 'qlo', 'RcHm_v2.0_Chr1g0334331' => 'rch', 'RcHm_v2.0_Chr2g0162931' => 'rch', 'RcHm_v2.0_Chr4g0402381' => 'rch', 'RcHm_v2.0_Chr4g0402391' => 'rch', 'RcHm_v2.0_Chr4g0419591' => 'rch', 'RcHm_v2.0_Chr5g0020951' => 'rch', 'RcHm_v2.0_Chr6g0289681' => 'rch', 'RcHm_v2.0_Chr7g0226121' => 'rch', 'RcHm_v2.0_Chr7g0233891' => 'rch', 'RcHm_v2.0_Chr7g0235511' => 'rch', 'Rhsim01G0004300' => 'rsi', 'Rhsim02G0050700' => 'rsi', 'Rhsim03G0264500' => 'rsi', 'Rhsim07G0212200' => 'rsi', 'Sabra02G0083900' => 'sbr', 'Sabra04G0079000' => 'sbr', 'Sabra06G0129500' => 'sbr', 'Sabra18G0079200' => 'sbr', 'SalBow1G6327' => 'sbo', 'SalBow5G3175' => 'sbo', 'SalBow6G4447' => 'sbo', 'Sc11g0008260' => 'sci', 'Sc15g0002720' => 'sci', 'Sc18g0007490' => 'sci', 'Sed0012519' => 'sed', 'Sed0013601' => 'sed', 'Sed0019942' => 'sed', 'Sed0024465' => 'sed', 'Sed0028040' => 'sed', 'SEGI_04794' => 'sgi', 'SEGI_24969' => 'sgi', 'SEGI_26800' => 'sgi', 'SEGI_34770' => 'sgi', 'SEGI_38409' => 'sgi', 'SGA_v2.0_scaffold114G32024' => 'sas', 'SGA_v2.0_scaffold12G06070' => 'sas', 'SGA_v2.0_scaffold48G17826' => 'sas', 'SGA_v2.0_scaffold66G22448' => 'sas', 'SGA_v2.0_scaffold69G23252' => 'sas', 'SHI03727' => 'shi', 'SHI03729' => 'shi', 'SHI03732' => 'shi', 'SMO165G0009' => 'smo', 'SMO270G0091' => 'smo', 'SMO367G0652' => 'smo', 'SMO367G1106' => 'smo', 'Solyc02g085820.3' => 'sly', 'Solyc04g076380.4' => 'sly', 'Solyc07g019460.3' => 'sly', 'Sopen00g012550' => 'spe', 'Sopen02g030510' => 'spe', 'Sopen04g030140' => 'spe', 'Sopen07g007920' => 'spe', 'Sp3g01340' => 'spa', 'Sp7g22510' => 'spa', 'Sp7g22520' => 'spa', 'Sp7g28090' => 'spa', 'SpUn0657_0010' => 'spa', 'TAR183G0004' => 'tar', 'TAR314G0003' => 'tar', 'TAR371G1090' => 'tar', 'TAR371G1234' => 'tar', 'TAR381G0764' => 'tar', 'TAR383G0189' => 'tar', 'TAR615G0001' => 'tar', 'TAR625G0662' => 'tar', 'TAR628G0282' => 'tar', 'TAR629G0236' => 'tar', 'TAR636G1193' => 'tar', 'TAR726G0002' => 'tar', 'THA.LOC104799789' => 'tha', 'THA.LOC104801705' => 'tha', 'THA.LOC104803494' => 'tha', 'THA.LOC104803939' => 'tha', 'THA.LOC104806881' => 'tha', 'THA.LOC104819977' => 'tha', 'THA.LOC104820980' => 'tha', 'Thecc.08G071500' => 'tca', 'Thecc.09G177300' => 'tca', 'Thecc.09G259800' => 'tca', 'Thhalv10011322m.g' => 'esa', 'Thhalv10024546m.g' => 'esa', 'Thhalv10024568m.g' => 'esa', 'TPR.G1747' => 'tpr', 'TPR.G33419' => 'tpr', 'TPR.G5394' => 'tpr', 'TPR.G6360' => 'tpr', 'TPR.G9733' => 'tpr', 'TWI32G0568' => 'twi', 'TWI36G0344' => 'twi', 'TWI56G1361' => 'twi', 'TWI63G1242' => 'twi', 'TWI74G0592' => 'twi', 'unitig_21.g20650' => 'ugi', 'unitig_744.g24133' => 'ugi', 'unitig_744.g24134' => 'ugi', 'unitig_746.g26561' => 'ugi', 'unitig_899.g15472' => 'ugi', 'vmacro04647' => 'vma', 'vmacro04660' => 'vma', 'vmacro05566' => 'vma', 'vmacro06013' => 'vma', 'vmacro13126' => 'vma', 'VMungo1215G0106' => 'vmu', 'VMungo1309G0307' => 'vmu', 'VMungo1383G0137' => 'vmu', 'Zm00001eb010260' => 'zma', 'Zm00001eb040630' => 'zma', 'Zm00001eb040640' => 'zma', 'Zm00001eb067960' => 'zma', 'Zm00001eb152230' => 'zma', 'Zm00001eb154050' => 'zma', 'Zm00001eb178320' => 'zma', 'Zm00001eb184590' => 'zma', 'Zm00001eb320430' => 'zma', 'Zm00001eb351140' => 'zma', 'Zm00001eb414620' => 'zma', 'Zm00001eb414630' => 'zma', 'Zm00001eb432420' => 'zma', 'Zm00001eb432450' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001049', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001049' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001049', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '579', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001049' ) ), 'genes' => array( 'A01p07920' => 'bna', 'A01p15880' => 'bna', 'A01p15890' => 'bna', 'A01p22950' => 'bna', 'A01p37190' => 'bna', 'A03p32880' => 'bna', 'A03p55340' => 'bna', 'A03p59610' => 'bna', 'A05p32700' => 'bna', 'A08p19350' => 'bna', 'Aa31LG2G20320' => 'aar', 'Aa31LG4G9620' => 'aar', 'Aa31LG5G12810' => 'aar', 'Aa31LG8G15960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3817' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.439' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1703' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_340.441' => 'aag', 'Actinidia02749' => 'ach', 'Actinidia08191' => 'ach', 'Actinidia08192' => 'ach', 'Actinidia15878' => 'ach', 'Actinidia15879' => 'ach', 'Actinidia19245' => 'ach', 'Actinidia19628' => 'ach', 'Actinidia19831' => 'ach', 'Actinidia27012' => 'ach', 'Actinidia38634' => 'ach', 'Ah.01g008960' => 'amhyb', 'Ah.05g171320' => 'amhyb', 'Ah.09g229840' => 'amhyb', 'Ah.10g037600' => 'amhyb', 'Ah.14g083860' => 'amhyb', 'AL3G11560' => 'aly', 'AL777U10010' => 'aly', 'AL7G21940' => 'aly', 'AL7G28700' => 'aly', 'Aqoxy3G03945' => 'aox', 'Aqoxy6G00858' => 'aox', 'Aqoxy7G03051' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2XG0SD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQAG9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBV3FR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0I0E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPBB19' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YXV5G1' => 'arhy', 'AT3G02280' => 'ath', 'AT3G24710' => 'ath', 'AT4G24520' => 'ath', 'AT4G30210' => 'ath', 'ATR0564G081' => 'atr', 'ATR0564G359' => 'atr', 'ATR0580G449' => 'atr', 'Atru.chr13.1005' => 'acertr', 'Atru.chr13.1275' => 'acertr', 'Atru.chr7.1178' => 'acertr', 'Atru.chr7.616' => 'acertr', 'AUR62008979' => 'cqu', 'AUR62014350' => 'cqu', 'AUR62014524' => 'cqu', 'AUR62019093' => 'cqu', 'AUR62021298' => 'cqu', 'AUR62033215' => 'cqu', 'AUR62043530' => 'cqu', 'BcaB01g02067' => 'bca', 'BcaB04g17099' => 'bca', 'BcaB06g26054' => 'bca', 'BcaB06g26057' => 'bca', 'BcaB07g33014' => 'bca', 'BcaB08g34532' => 'bca', 'BcaC01g01164' => 'bca', 'BcaC01g04452' => 'bca', 'BcaC01g04542' => 'bca', 'BcaC05g28232' => 'bca', 'BcaC05g28235' => 'bca', 'BcaC06g32879' => 'bca', 'BcaC07g37699' => 'bca', 'BcaC09g50859' => 'bca', 'BcaC09g50860' => 'bca', 'BcaC09g51804' => 'bca', 'BcaNung00530' => 'bca', 'BcaNung06311' => 'bca', 'BcaNung06377' => 'bca', 'BolC1t00875H' => 'bol', 'BolC1t01910H' => 'bol', 'BolC1t01911H' => 'bol', 'BolC3t16266H' => 'bol', 'BolC3t21192H' => 'bol', 'BolC3t21193H' => 'bol', 'BolC4t24578H' => 'bol', 'BolC5t33015H' => 'bol', 'BolC5t33017H' => 'bol', 'BolC7t45855H' => 'bol', 'BolC7t46229H' => 'bol', 'BolC8t47349H' => 'bol', 'BolC8t48085H' => 'bol', 'BraA01t00738Z' => 'bra', 'BraA01t01522Z' => 'bra', 'BraA01t01523Z' => 'bra', 'BraA01t03780Z' => 'bra', 'BraA03t12457Z' => 'bra', 'BraA03t14593Z' => 'bra', 'BraA03t15018Z' => 'bra', 'BraA08t33896Z' => 'bra', 'C01p08840' => 'bna', 'C01p19820' => 'bna', 'C01p19840' => 'bna', 'C03p40010' => 'bna', 'C03p88810' => 'bna', 'C05p42860' => 'bna', 'C07p53630' => 'bna', 'C07p57650' => 'bna', 'CAN.G1165.2' => 'can', 'CAN.G440.3' => 'can', 'CAN.G475.20' => 'can', 'CAN.G625.5' => 'can', 'CAN.G852.5' => 'can', 'CANSAT11G1186' => 'cansat', 'CANSAT25G1018' => 'cansat', 'CANSAT64G1724' => 'cansat', 'CARHR076240' => 'chi', 'CARHR231910' => 'chi', 'CARHR231920' => 'chi', 'CARHR238120' => 'chi', 'CARHR246570' => 'chi', 'Carub.0003s0139' => 'cru', 'Carub.0003s2478' => 'cru', 'Carub.0007s1040' => 'cru', 'Carub.0007s1655' => 'cru', 'Ca_01353_v3' => 'car', 'Ca_04065_v3' => 'car', 'Ca_21228_v3' => 'car', 'Ca_23435_v3' => 'car', 'CBR_g45849' => 'cbr', 'CBR_g66801' => 'cbr', 'CBR_g76440' => 'cbr', 'Cc06_g13220' => 'ccan', 'Cc07_g08880' => 'ccan', 'Cc10_g15930' => 'ccan', 'CDE02G0228' => 'cde', 'CDE04G0722' => 'cde', 'CDE04G2168' => 'cde', 'CDE05G0709' => 'cde', 'CDE05G0754' => 'cde', 'CDE05G1223' => 'cde', 'CDE05G2069' => 'cde', 'CDE05G2137' => 'cde', 'CDE05G2905' => 'cde', 'CDE07G0189' => 'cde', 'Cfa013502' => 'cfa', 'Cfa013801' => 'cfa', 'Cfa022576' => 'cfa', 'Cfa023262' => 'cfa', 'Cfa023480' => 'cfa', 'Ciclev10000469m.g' => 'ccl', 'Ciclev10000583m.g' => 'ccl', 'Ciclev10007535m.g' => 'ccl', 'CiPaw.04G041100' => 'cil', 'CiPaw.07G192400' => 'cil', 'CiPaw.08G036100' => 'cil', 'CiPaw.08G055900' => 'cil', 'ClCG06G013360' => 'cla', 'ClCG07G017080' => 'cla', 'ClCG11G012150' => 'cla', 'COL.COLO4_25241' => 'col', 'COL.COLO4_25242' => 'col', 'COL.COLO4_35252' => 'col', 'COL.COLO4_37704' => 'col', 'Cpa.g.c29936.1' => 'cpa', 'Cpa.g.sc179.4' => 'cpa', 'Cpa.g.sc21.27' => 'cpa', 'Cpa.g.sc233.8' => 'cpa', 'Cre01.g039350' => 'cre', 'Cre03.g180300' => 'cre', 'Cre12.g551850' => 'cre', 'Cre16.g683550' => 'cre', 'CsaV3_1G031610' => 'csa', 'CsaV3_2G008410' => 'csa', 'CsaV3_4G004300' => 'csa', 'CSS0024879' => 'camsi', 'CSS0032537' => 'camsi', 'CSS0037498' => 'camsi', 'CSS0043035' => 'camsi', 'CSS0049553' => 'camsi', 'DCAR_014700' => 'dca', 'DCAR_017970' => 'dca', 'DCAR_019602' => 'dca', 'DCAR_020124' => 'dca', 'DCAR_029529' => 'dca', 'DCAR_029530' => 'dca', 'Dinv34836' => 'din', 'Dinv41245' => 'din', 'Dinv42608' => 'din', 'Dinv42720' => 'din', 'Dinv43381' => 'din', 'Dinv44863' => 'din', 'Duzib041G0510' => 'dzi', 'Duzib093G0120' => 'dzi', 'Duzib150G0039' => 'dzi', 'Duzib150G1377' => 'dzi', 'Duzib168G0135' => 'dzi', 'Duzib170G0377' => 'dzi', 'ECA234G4507' => 'eca', 'ECA236G0274' => 'eca', 'ECA236G3859' => 'eca', 'ECA238G2427' => 'eca', 'ECA240G1318' => 'eca', 'EL10Ac1g00992' => 'bvu', 'EL10Ac2g04590' => 'bvu', 'EL10Ac8g18281' => 'bvu', 'Eucgr.C00154' => 'egr', 'Eucgr.C02330' => 'egr', 'Eucgr.J01497' => 'egr', 'FAN01G0915' => 'fan', 'FAN02G0215' => 'fan', 'FAN03G1095' => 'fan', 'FAN04G0104' => 'fan', 'FAN05G1438' => 'fan', 'FAN07G2539' => 'fan', 'FAN08G0165' => 'fan', 'FAN09G1302' => 'fan', 'FAN10G0721' => 'fan', 'FAN11G1854' => 'fan', 'FAN12G1664' => 'fan', 'FAN13G3329' => 'fan', 'FAN14G1155' => 'fan', 'FAN14G2476' => 'fan', 'FAN17G0476' => 'fan', 'FAN18G0905' => 'fan', 'FAN18G0950' => 'fan', 'FAN19G0265' => 'fan', 'FAN22G1504' => 'fan', 'FvH4_1g29080' => 'fve', 'FvH4_3g26990' => 'fve', 'FvH4_4g08180' => 'fve', 'FvH4_5g10660' => 'fve', 'FvH4_5g34830' => 'fve', 'FvH4_6g45220' => 'fve', 'FvH4_7g05330' => 'fve', 'FvH4_7g05331' => 'fve', 'Glyma.02G160251' => 'gma', 'Glyma.02G214700' => 'gma', 'Glyma.04G095500' => 'gma', 'Glyma.06G097200' => 'gma', 'Glyma.08G364302' => 'gma', 'Glyma.13G096500' => 'gma', 'Glyma.14G182100' => 'gma', 'Glyma.17G063000' => 'gma', 'Glyma.18G297800' => 'gma', 'Gohir.A01G126300' => 'ghi', 'Gohir.A05G004900' => 'ghi', 'Gohir.A05G219300' => 'ghi', 'Gohir.A05G360900' => 'ghi', 'Gohir.A07G116600' => 'ghi', 'Gohir.A08G023216' => 'ghi', 'Gohir.A08G023408' => 'ghi', 'Gohir.A08G023416' => 'ghi', 'Gohir.D01G113900' => 'ghi', 'Gohir.D04G100432' => 'ghi', 'Gohir.D04G111100' => 'ghi', 'Gohir.D05G005800' => 'ghi', 'Gohir.D05G221900' => 'ghi', 'Gohir.D07G121000' => 'ghi', 'Gohir.D08G034000' => 'ghi', 'Gohir.D08G111608' => 'ghi', 'Gohir.D10G139266' => 'ghi', 'Gohir.D11G131600' => 'ghi', 'Gohir.D11G228980' => 'ghi', 'Gorai.001G130600' => 'gra', 'Gorai.002G138900' => 'gra', 'Gorai.004G031600' => 'gra', 'Gorai.004G119600' => 'gra', 'Gorai.006G045500' => 'gra', 'Gorai.009G005600' => 'gra', 'Gorai.009G229300' => 'gra', 'GSVIVG01009185001' => 'vvi', 'GSVIVG01014384001' => 'vvi', 'GSVIVG01014385001' => 'vvi', 'GSVIVG01029213001' => 'vvi', 'GSVIVG01031054001' => 'vvi', 'HanXRQChr02g0034591' => 'han', 'HanXRQChr05g0142991' => 'han', 'HanXRQChr09g0244761' => 'han', 'HanXRQChr09g0254451' => 'han', 'HanXRQChr09g0255411' => 'han', 'HanXRQChr12g0358291' => 'han', 'HanXRQChr12g0358301' => 'han', 'HanXRQChr12g0365411' => 'han', 'HanXRQChr12g0376471' => 'han', 'HanXRQChr13g0412341' => 'han', 'HanXRQChr14g0429191' => 'han', 'Haze_22094' => 'cav', 'Haze_22464' => 'cav', 'Hma1.2p1_0125F.1_g058820' => 'hma', 'Hma1.2p1_0550F.1_g177330' => 'hma', 'Hma1.2p1_1025F.1_g249330' => 'hma', 'Hma1.2p1_3581F.1_g336840' => 'hma', 'HPP92_003525' => 'vpl', 'HPP92_005481' => 'vpl', 'HPP92_010748' => 'vpl', 'HPP92_015367' => 'vpl', 'HPP92_018334' => 'vpl', 'HPP92_018376' => 'vpl', 'Hund01739' => 'sun', 'Hund09029' => 'sun', 'Hund13726' => 'sun', 'Hund17286' => 'sun', 'Hund26351' => 'sun', 'Hund26816' => 'sun', 'Lalb_Chr04g0252811' => 'lal', 'Lalb_Chr07g0180491' => 'lal', 'Lalb_Chr08g0242561' => 'lal', 'Lalb_Chr10g0091161' => 'lal', 'Lalb_Chr11g0064941' => 'lal', 'Lalb_Chr12g0199431' => 'lal', 'Lj1g0009282' => 'lja', 'Lj1g0012839' => 'lja', 'Lj1g0028233' => 'lja', 'Lj4C194T12' => 'lonja', 'Lj4C717G5' => 'lonja', 'Lj4C738G5' => 'lonja', 'Lj4g0000806' => 'lja', 'Lj4g0009595' => 'lja', 'Lj5A7T12' => 'lonja', 'Lj6g0008823' => 'lja', 'Lj6g0018247' => 'lja', 'Lj9A24T28' => 'lonja', 'Lj9C26T2' => 'lonja', 'Lsat_1_v5_gn_0_21360' => 'lsa', 'Lsat_1_v5_gn_2_110721' => 'lsa', 'Lsat_1_v5_gn_2_110801' => 'lsa', 'Lsat_1_v5_gn_2_9800' => 'lsa', 'Lsat_1_v5_gn_3_129101' => 'lsa', 'Lsat_1_v5_gn_3_81881' => 'lsa', 'Lsat_1_v5_gn_5_79581' => 'lsa', 'Lsat_1_v5_gn_5_85441' => 'lsa', 'Lsat_1_v5_gn_6_70320' => 'lsa', 'Lsat_1_v5_gn_6_72241' => 'lsa', 'Lsat_1_v5_gn_7_115600' => 'lsa', 'Lsat_1_v5_gn_7_54581' => 'lsa', 'Lsat_1_v5_gn_8_1281' => 'lsa', 'Lsat_1_v5_gn_8_67661' => 'lsa', 'Lsat_1_v5_gn_9_32960' => 'lsa', 'Lsat_1_v5_gn_9_87640' => 'lsa', 'Lsat_1_v5_gn_9_87680' => 'lsa', 'Manes.01G109200' => 'mes', 'Manes.14G154000' => 'mes', 'Manes.18G058100' => 'mes', 'Manes.18G058200' => 'mes', 'Mapoly0012s0011' => 'mpo', 'Mapoly0159s0022' => 'mpo', 'MBI04_g11121_MAGBIO' => 'mbi', 'MBI14_g17372_MAGBIO' => 'mbi', 'MBI15_g39956_MAGBIO' => 'mbi', 'MBI16_g27571_MAGBIO' => 'mbi', 'MBI16_g39836_MAGBIO' => 'mbi', 'MBI19_g21647_MAGBIO' => 'mbi', 'MBI19_g21649_MAGBIO' => 'mbi', 'MBI19_g21650_MAGBIO' => 'mbi', 'MCO01G527' => 'mco', 'MCO02G064' => 'mco', 'MCO06G260' => 'mco', 'MD08G1199100' => 'mdo', 'MD09G1086400' => 'mdo', 'MD09G1086700' => 'mdo', 'MD09G1087200' => 'mdo', 'MD12G1122800' => 'mdo', 'MD13G1253300' => 'mdo', 'MD15G1386100' => 'mdo', 'MD16G1257600' => 'mdo', 'Medtr1g102950' => 'mtr', 'Medtr3g100160' => 'mtr', 'Medtr4g128020' => 'mtr', 'Medtr7g101180' => 'mtr', 'Medtr7g406970' => 'mtr', 'MELO3C004023.2' => 'cme', 'MELO3C017461.2' => 'cme', 'MELO3C017636.2' => 'cme', 'Migut.J01483' => 'egut', 'Migut.K00241' => 'egut', 'Migut.L00308' => 'egut', 'Migut.N02860' => 'egut', 'MSTRG.10739' => 'ama', 'MSTRG.19708' => 'ama', 'MSTRG.24430' => 'ama', 'MSTRG.6220' => 'ama', 'Nitab4.5_0000131g0220' => 'nta', 'Nitab4.5_0000455g0070' => 'nta', 'Nitab4.5_0001569g0100' => 'nta', 'Nitab4.5_0001972g0020' => 'nta', 'Nitab4.5_0004944g0040' => 'nta', 'Nitab4.5_0005199g0010' => 'nta', 'Nitab4.5_0005913g0030' => 'nta', 'Nn1g05589' => 'nnu', 'Nn2g12771' => 'nnu', 'Nn3g17797' => 'nnu', 'Nn5g29378' => 'nnu', 'Nn5g29871' => 'nnu', 'Nn6g35206' => 'nnu', 'Nn7g37415' => 'nnu', 'Nn8g40480' => 'nnu', 'Oeu009850.1' => 'oeu', 'Oeu012755.1' => 'oeu', 'Oeu025212.1' => 'oeu', 'Oeu033941.2' => 'oeu', 'Oeu042169.1' => 'oeu', 'Oeu044321.1' => 'oeu', 'Oeu056511.1' => 'oeu', 'Oeu064372.1' => 'oeu', 'Os01g0733600' => 'osa', 'Os04g0653400' => 'osa', 'Os07g0496600' => 'osa', 'Os08g0243500' => 'osa', 'Os09g0558900' => 'osa', 'Peaxi162Scf00231g00617' => 'pax', 'Peaxi162Scf00454g00327' => 'pax', 'Peaxi162Scf00814g00241' => 'pax', 'PGR042G0664' => 'pgr', 'PGR042G3763' => 'pgr', 'PGR044G1953' => 'pgr', 'PGSC0003DMG400009340' => 'stu', 'PGSC0003DMG400012672' => 'stu', 'PGSC0003DMG400013779' => 'stu', 'Phvul.003G145400' => 'pvu', 'Phvul.008G004800' => 'pvu', 'Phvul.008G182200' => 'pvu', 'Phvul.009G036200' => 'pvu', 'Potri.002G106566' => 'ptr', 'Potri.002G106632' => 'ptr', 'Potri.004G101100' => 'ptr', 'Potri.005G153800' => 'ptr', 'Potri.006G167200' => 'ptr', 'Potri.011G027100' => 'ptr', 'Potri.018G092100' => 'ptr', 'Pp3c14_22890' => 'ppa', 'Pp3c17_22110' => 'ppa', 'Pp3c20_9680' => 'ppa', 'Pp3c24_17560' => 'ppa', 'Pp3c8_19940' => 'ppa', 'Pp3c9_18000' => 'ppa', 'PRCOL_00000398' => 'pco', 'PRCOL_00003067' => 'pco', 'PRCOL_00005248' => 'pco', 'PRCOL_00006450' => 'pco', 'Prupe.1G085400' => 'ppe', 'Prupe.1G532800' => 'ppe', 'Prupe.3G238300' => 'ppe', 'Psat0s2718g0080' => 'psa', 'Psat3g206240' => 'psa', 'Psat5g046800' => 'psa', 'PSO063G1351' => 'pso', 'PSO170G4160' => 'pso', 'PSO541G2259' => 'pso', 'PSO541G5110' => 'pso', 'PSO566G0159' => 'pso', 'PSO782G4668' => 'pso', 'QL02p051854' => 'qlo', 'QL02p097801' => 'qlo', 'QL09p017878' => 'qlo', 'RcHm_v2.0_Chr1g0334331' => 'rch', 'RcHm_v2.0_Chr2g0162931' => 'rch', 'RcHm_v2.0_Chr4g0402381' => 'rch', 'RcHm_v2.0_Chr4g0402391' => 'rch', 'RcHm_v2.0_Chr4g0419591' => 'rch', 'RcHm_v2.0_Chr5g0020951' => 'rch', 'RcHm_v2.0_Chr6g0289681' => 'rch', 'RcHm_v2.0_Chr7g0226121' => 'rch', 'RcHm_v2.0_Chr7g0233891' => 'rch', 'RcHm_v2.0_Chr7g0235511' => 'rch', 'Rhsim01G0004300' => 'rsi', 'Rhsim02G0050700' => 'rsi', 'Rhsim03G0264500' => 'rsi', 'Rhsim07G0212200' => 'rsi', 'Sabra02G0083900' => 'sbr', 'Sabra04G0079000' => 'sbr', 'Sabra06G0129500' => 'sbr', 'Sabra18G0079200' => 'sbr', 'SalBow1G6327' => 'sbo', 'SalBow5G3175' => 'sbo', 'SalBow6G4447' => 'sbo', 'Sc11g0008260' => 'sci', 'Sc15g0002720' => 'sci', 'Sc18g0007490' => 'sci', 'Sed0012519' => 'sed', 'Sed0013601' => 'sed', 'Sed0019942' => 'sed', 'Sed0024465' => 'sed', 'Sed0028040' => 'sed', 'SEGI_04794' => 'sgi', 'SEGI_24969' => 'sgi', 'SEGI_26800' => 'sgi', 'SEGI_34770' => 'sgi', 'SEGI_38409' => 'sgi', 'SGA_v2.0_scaffold114G32024' => 'sas', 'SGA_v2.0_scaffold12G06070' => 'sas', 'SGA_v2.0_scaffold48G17826' => 'sas', 'SGA_v2.0_scaffold66G22448' => 'sas', 'SGA_v2.0_scaffold69G23252' => 'sas', 'SHI03727' => 'shi', 'SHI03729' => 'shi', 'SHI03732' => 'shi', 'SMO165G0009' => 'smo', 'SMO270G0091' => 'smo', 'SMO367G0652' => 'smo', 'SMO367G1106' => 'smo', 'Solyc02g085820.3' => 'sly', 'Solyc04g076380.4' => 'sly', 'Solyc07g019460.3' => 'sly', 'Sopen00g012550' => 'spe', 'Sopen02g030510' => 'spe', 'Sopen04g030140' => 'spe', 'Sopen07g007920' => 'spe', 'Sp3g01340' => 'spa', 'Sp7g22510' => 'spa', 'Sp7g22520' => 'spa', 'Sp7g28090' => 'spa', 'SpUn0657_0010' => 'spa', 'TAR183G0004' => 'tar', 'TAR314G0003' => 'tar', 'TAR371G1090' => 'tar', 'TAR371G1234' => 'tar', 'TAR381G0764' => 'tar', 'TAR383G0189' => 'tar', 'TAR615G0001' => 'tar', 'TAR625G0662' => 'tar', 'TAR628G0282' => 'tar', 'TAR629G0236' => 'tar', 'TAR636G1193' => 'tar', 'TAR726G0002' => 'tar', 'THA.LOC104799789' => 'tha', 'THA.LOC104801705' => 'tha', 'THA.LOC104803494' => 'tha', 'THA.LOC104803939' => 'tha', 'THA.LOC104806881' => 'tha', 'THA.LOC104819977' => 'tha', 'THA.LOC104820980' => 'tha', 'Thecc.08G071500' => 'tca', 'Thecc.09G177300' => 'tca', 'Thecc.09G259800' => 'tca', 'Thhalv10011322m.g' => 'esa', 'Thhalv10024546m.g' => 'esa', 'Thhalv10024568m.g' => 'esa', 'TPR.G1747' => 'tpr', 'TPR.G33419' => 'tpr', 'TPR.G5394' => 'tpr', 'TPR.G6360' => 'tpr', 'TPR.G9733' => 'tpr', 'TWI32G0568' => 'twi', 'TWI36G0344' => 'twi', 'TWI56G1361' => 'twi', 'TWI63G1242' => 'twi', 'TWI74G0592' => 'twi', 'unitig_21.g20650' => 'ugi', 'unitig_744.g24133' => 'ugi', 'unitig_744.g24134' => 'ugi', 'unitig_746.g26561' => 'ugi', 'unitig_899.g15472' => 'ugi', 'vmacro04647' => 'vma', 'vmacro04660' => 'vma', 'vmacro05566' => 'vma', 'vmacro06013' => 'vma', 'vmacro13126' => 'vma', 'VMungo1215G0106' => 'vmu', 'VMungo1309G0307' => 'vmu', 'VMungo1383G0137' => 'vmu', 'Zm00001eb010260' => 'zma', 'Zm00001eb040630' => 'zma', 'Zm00001eb040640' => 'zma', 'Zm00001eb067960' => 'zma', 'Zm00001eb152230' => 'zma', 'Zm00001eb154050' => 'zma', 'Zm00001eb178320' => 'zma', 'Zm00001eb184590' => 'zma', 'Zm00001eb320430' => 'zma', 'Zm00001eb351140' => 'zma', 'Zm00001eb414620' => 'zma', 'Zm00001eb414630' => 'zma', 'Zm00001eb432420' => 'zma', 'Zm00001eb432450' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001049' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001049' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001049' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001049' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151