Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0287591 Rosa chinensis HOM05D000005 ORTHO05D001748 7.4e-82 307.0 139 100.0
RcHm_v2.0_Chr6g0287411 Rosa chinensis HOM05D000005 ORTHO05D001748 6.1e-60 234.2 138 77.5
Prupe.8G118900 Prunus persica HOM05D000005 ORTHO05D000012 1.0e-22 110.5 80 65.0
Prupe.2G060400 Prunus persica HOM05D000005 ORTHO05D000012 1.5e-21 106.7 137 43.1
MD10G1135900 Malus domestica HOM05D000005 ORTHO05D000012 1.2e-20 103.6 145 43.4
CANSAT54G2110 Cannabis sativa HOM05D000005 ORTHO05D000012 1.6e-20 103.2 143 42.7
Prupe.2G083200 Prunus persica HOM05D000005 ORTHO05D000012 6.2e-20 101.3 115 48.7
MD10G1136400 Malus domestica HOM05D000005 ORTHO05D000012 8.9e-19 97.4 141 43.3
MD10G1128600 Malus domestica HOM05D000005 ORTHO05D000012 1.2e-18 97.1 111 45.0
MD10G1137100 Malus domestica HOM05D053708 ORTHO05D011727 1.5e-18 96.7 116 45.7
MD10G1137400 Malus domestica HOM05D000005 ORTHO05D000012 3.4e-18 95.5 141 42.6
Prupe.8G179400 Prunus persica HOM05D000005 ORTHO05D000012 3.4e-18 95.5 135 40.0
Prupe.8G237200 Prunus persica HOM05D000005 ORTHO05D000012 3.4e-18 95.5 102 51.0
Prupe.8G179500 Prunus persica HOM05D000005 ORTHO05D000012 1.3e-17 93.6 126 42.9
Prupe.I001800 Prunus persica HOM05D000005 ORTHO05D000012 1.3e-17 93.6 109 47.7
MD10G1134800 Malus domestica HOM05D000005 ORTHO05D011727 2.9e-17 92.4 112 47.3
Prupe.I002200 Prunus persica HOM05D000005 ORTHO05D000012 4.9e-17 91.7 109 46.8
MD10G1137700 Malus domestica HOM05D000005 ORTHO05D000012 6.4e-17 91.3 142 39.4
MD10G1141400 Malus domestica HOM05D000005 ORTHO05D011727 8.4e-17 90.9 111 45.0
MD05G1125700 Malus domestica HOM05D000005 ORTHO05D011727 2.4e-16 89.4 78 53.8
RcHm_v2.0_Chr1g0314671 Rosa chinensis HOM05D000005 ORTHO05D000012 3.2e-16 89.0 109 41.3
MD10G1135300 Malus domestica HOM05D000005 ORTHO05D000012 5.4e-16 88.2 120 40.8
RcHm_v2.0_Chr1g0314491 Rosa chinensis HOM05D000005 ORTHO05D000012 7.1e-16 87.8 109 40.4
RcHm_v2.0_Chr5g0026001 Rosa chinensis HOM05D000005 ORTHO05D000012 1.6e-15 86.7 139 37.4
MD05G1125600 Malus domestica HOM05D000005 ORTHO05D011727 2.1e-15 86.3 74 52.7
RcHm_v2.0_Chr5g0013871 Rosa chinensis HOM05D000005 ORTHO05D011727 2.7e-15 85.9 141 41.8
MD10G1136600 Malus domestica HOM05D000005 ORTHO05D000012 3.5e-15 85.5 113 40.7
Prupe.8G176400 Prunus persica HOM05D000005 ORTHO05D000012 3.5e-15 85.5 124 39.5
RcHm_v2.0_Chr5g0066271 Rosa chinensis HOM05D000005 ORTHO05D011727 4.6e-15 85.1 136 37.5
CARHR226300 Cardamine hirsuta HOM05D000005 ORTHO05D000012 6.0e-15 84.7 121 37.2
Ciclev10024544m.g Citrus clementina HOM05D000005 ORTHO05D000012 6.0e-15 84.7 90 47.8
RcHm_v2.0_Chr7g0237431 Rosa chinensis HOM05D000005 ORTHO05D011727 6.0e-15 84.7 136 36.8
RcHm_v2.0_Chr1g0314461 Rosa chinensis HOM05D000005 ORTHO05D000012 7.8e-15 84.3 140 36.4
MD05G1126000 Malus domestica HOM05D000005 ORTHO05D000012 1.0e-14 84.0 121 39.7
RcHm_v2.0_Chr3g0451671 Rosa chinensis HOM05D000005 ORTHO05D000012 1.7e-14 83.2 141 38.3
RcHm_v2.0_Chr1g0334101 Rosa chinensis HOM05D000005 ORTHO05D000012 2.3e-14 82.8 136 36.8
THA.LOC104811322 Tarenaya hassleriana HOM05D000005 ORTHO05D000012 2.3e-14 82.8 126 35.7
RcHm_v2.0_Chr5g0026421 Rosa chinensis HOM05D000005 ORTHO05D000012 3.9e-14 82.0 144 34.7
FvH4_5g35770 Fragaria vesca HOM05D000005 ORTHO05D000012 8.7e-14 80.9 141 36.2
FAN08G1978 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.7e-14 80.9 141 36.2
FAN18G0074 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.7e-14 80.9 141 36.2
MD05G1138400 Malus domestica HOM05D000005 ORTHO05D000012 1.5e-13 80.1 116 44.0
Prupe.I002000 Prunus persica HOM05D000005 ORTHO05D011727 1.5e-13 80.1 150 35.3
RcHm_v2.0_Chr3g0451471 Rosa chinensis HOM05D000005 ORTHO05D011727 1.9e-13 79.7 137 38.7
RcHm_v2.0_Chr3g0484861 Rosa chinensis HOM05D000005 ORTHO05D000012 2.5e-13 79.3 140 35.0
A08p14360 Brassica napus HOM05D000005 ORTHO05D000012 3.3e-13 79.0 120 32.5
BraA08t33427Z Brassica rapa HOM05D000005 ORTHO05D000012 3.3e-13 79.0 120 32.5
FAN24G1978 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.3e-13 79.0 127 37.0
Aa31LG9G10470 Aethionema arabicum HOM05D000005 ORTHO05D000012 4.3e-13 78.6 92 42.4
C03p82030 Brassica napus HOM05D000005 ORTHO05D000012 4.3e-13 78.6 120 33.3
BolC3t20484H Brassica oleracea HOM05D000005 ORTHO05D000012 4.3e-13 78.6 120 33.3
RcHm_v2.0_Chr1g0314741 Rosa chinensis HOM05D000005 ORTHO05D000012 4.3e-13 78.6 118 40.7
RcHm_v2.0_Chr3g0451641 Rosa chinensis HOM05D000005 ORTHO05D011727 4.3e-13 78.6 115 41.7
FvH4_2g27070 Fragaria vesca HOM05D000005 ORTHO05D000012 5.6e-13 78.2 127 37.8
FAN20G1468 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.6e-13 78.2 127 37.0
MD05G1132400 Malus domestica HOM05D000005 ORTHO05D000012 7.3e-13 77.8 122 38.5
FAN13G2462 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.6e-13 77.4 141 36.2
BolC7t45548H Brassica oleracea HOM05D000005 ORTHO05D000012 1.3e-12 77.0 134 32.8
Atru.chr12.1320 Acer truncatum HOM05D000005 ORTHO05D000012 1.6e-12 76.6 119 40.3
FvH4_2g27720 Fragaria vesca HOM05D000005 ORTHO05D000012 1.6e-12 76.6 124 35.5
C03p82060 Brassica napus HOM05D000005 ORTHO05D000012 2.1e-12 76.3 120 33.3
AT4G19510 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 2.8e-12 75.9 117 33.3
Prupe.1G160400 Prunus persica HOM05D000005 ORTHO05D000012 2.8e-12 75.9 101 38.6
FAN05G5225 Fragaria x ananassa HOM05D000005 ORTHO05D011727 3.6e-12 75.5 116 41.4
Manes.06G161500 Manihot esculenta HOM05D000005 ORTHO05D000012 3.6e-12 75.5 95 35.8
BolC3t20478H Brassica oleracea HOM05D000005 ORTHO05D000012 6.2e-12 74.7 126 34.1
MD05G1145200 Malus domestica HOM05D000005 ORTHO05D000012 6.2e-12 74.7 80 46.2
BcaC01g00616 Brassica carinata HOM05D000005 ORTHO05D000012 8.1e-12 74.3 121 33.9
BcaC06g30633 Brassica carinata HOM05D000005 ORTHO05D000012 8.1e-12 74.3 103 36.9
RcHm_v2.0_Chr3g0451521 Rosa chinensis HOM05D000005 ORTHO05D011727 8.1e-12 74.3 107 41.1
C07p50450 Brassica napus HOM05D000005 ORTHO05D000012 1.1e-11 73.9 134 31.3
MD03G1127300 Malus domestica HOM05D000005 ORTHO05D000012 1.1e-11 73.9 146 32.9
BcaC09g51400 Brassica carinata HOM05D000005 ORTHO05D000012 1.4e-11 73.6 122 36.9
CSS0009559 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.4e-11 72.8 60 48.3
MD16G1140700 Malus domestica HOM05D000005 ORTHO05D000012 2.4e-11 72.8 122 40.2
CARHR226270 Cardamine hirsuta HOM05D000005 ORTHO05D000012 3.1e-11 72.4 126 31.7
RcHm_v2.0_Chr3g0451581 Rosa chinensis HOM05D000005 ORTHO05D000012 3.1e-11 72.4 112 37.5
MD05G1132600 Malus domestica HOM05D000005 ORTHO05D011727 4.0e-11 72.0 122 36.1
A03p51900 Brassica napus HOM05D000005 ORTHO05D000012 5.3e-11 71.6 133 31.6
C01p13500 Brassica napus HOM05D000005 ORTHO05D011295 5.3e-11 71.6 121 34.7
BraA03t14278Z Brassica rapa HOM05D000005 ORTHO05D000012 5.3e-11 71.6 133 31.6
AL7G34610 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 6.9e-11 71.2 88 37.5
AL8G13600 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 6.9e-11 71.2 140 31.4
C07p50410 Brassica napus HOM05D000005 ORTHO05D000012 9.0e-11 70.9 126 32.5
CSS0032227 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 9.0e-11 70.9 90 35.6
CSS0043873 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 9.0e-11 70.9 90 35.6
FvH4_7g28550 Fragaria vesca HOM05D000005 ORTHO05D000012 9.0e-11 70.9 90 40.0
FAN03G3405 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.0e-11 70.9 90 40.0
FAN06G4475 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.0e-11 70.9 90 40.0
FAN10G3442 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.0e-11 70.9 90 40.0
RcHm_v2.0_Chr1g0372491 Rosa chinensis HOM05D000005 ORTHO05D000012 9.0e-11 70.9 84 41.7
Aa31LG6G2080 Aethionema arabicum HOM05D000005 ORTHO05D000012 1.2e-10 70.5 132 30.3
C03p82010 Brassica napus HOM05D000005 ORTHO05D000012 1.2e-10 70.5 118 33.9
BolC3t15883H Brassica oleracea HOM05D000005 ORTHO05D000012 1.2e-10 70.5 92 39.1
Carub.0007s2170 Capsella rubella HOM05D000005 ORTHO05D000012 1.2e-10 70.5 121 32.2
FAN03G0099 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.2e-10 70.5 90 40.0
FvH4_7g26071 Fragaria vesca HOM05D000005 ORTHO05D000012 1.5e-10 70.1 90 38.9
RcHm_v2.0_Chr1g0372511 Rosa chinensis HOM05D000005 ORTHO05D001748 1.5e-10 70.1 78 44.9
BcaB01g01706 Brassica carinata HOM05D000005 ORTHO05D000012 2.6e-10 69.3 92 39.1
BcaC04g21186 Brassica carinata HOM05D000005 ORTHO05D000012 2.6e-10 69.3 92 39.1
A09p27110 Brassica napus HOM05D000005 ORTHO05D000012 2.6e-10 69.3 92 39.1
A09p27140 Brassica napus HOM05D000005 ORTHO05D000012 2.6e-10 69.3 92 39.1
C09p34470 Brassica napus HOM05D000005 ORTHO05D000012 2.6e-10 69.3 92 39.1
BolC9t56290H Brassica oleracea HOM05D000005 ORTHO05D000012 2.6e-10 69.3 92 39.1
BraA09t38283Z Brassica rapa HOM05D000005 ORTHO05D000012 2.6e-10 69.3 92 39.1
CANSAT01G2682 Cannabis sativa HOM05D000005 ORTHO05D000012 2.6e-10 69.3 133 29.3
CARHR254250 Cardamine hirsuta HOM05D000005 ORTHO05D000012 2.6e-10 69.3 92 38.0
MD12G1074900 Malus domestica HOM05D000005 ORTHO05D000012 3.4e-10 68.9 80 43.8
Manes.18G114900 Manihot esculenta HOM05D000005 ORTHO05D000012 3.4e-10 68.9 81 39.5
FvH4_2g27370 Fragaria vesca HOM05D000005 ORTHO05D000012 4.4e-10 68.6 110 42.7
RcHm_v2.0_Chr1g0372541 Rosa chinensis HOM05D000005 ORTHO05D000012 4.4e-10 68.6 84 40.5
Thhalv10028373m.g Eutrema salsugineum HOM05D000005 ORTHO05D000012 5.8e-10 68.2 92 38.0
RcHm_v2.0_Chr3g0451661 Rosa chinensis HOM05D000005 ORTHO05D011727 5.8e-10 68.2 100 41.0
AL7G34640 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 7.6e-10 67.8 82 39.0
BraA03t12147Z Brassica rapa HOM05D000005 ORTHO05D000012 9.9e-10 67.4 95 36.8
CSS0012687 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D001748 1.3e-09 67.0 91 37.4
RcHm_v2.0_Chr5g0013881 Rosa chinensis HOM05D000005 ORTHO05D000012 1.3e-09 67.0 98 41.8
THA.LOC104811344 Tarenaya hassleriana HOM05D000005 ORTHO05D000012 1.3e-09 67.0 140 30.7
GSVIVG01004877001 Vitis vinifera HOM05D000005 ORTHO05D000012 1.3e-09 67.0 53 52.8
AT4G19470 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 1.7e-09 66.6 130 31.5
Lj3A251T21 Lonicera japonica HOM05D007424 ORTHO05D001748 1.7e-09 66.6 50 58.0
FAN15G2166 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.2e-09 66.2 82 40.2
MD05G1150100 Malus domestica HOM05D000005 ORTHO05D000012 2.2e-09 66.2 44 59.1
Manes.02G206150 Manihot esculenta HOM05D000005 ORTHO05D000012 2.2e-09 66.2 121 35.5
MD05G1151200 Malus domestica HOM05D000005 ORTHO05D000012 2.9e-09 65.9 44 63.6
BcaNung02555 Brassica carinata HOM05D000005 ORTHO05D018471 3.8e-09 65.5 87 32.2
C07p50480 Brassica napus HOM05D000005 ORTHO05D018471 3.8e-09 65.5 87 32.2
FAN11G3162 Fragaria x ananassa HOM05D021293 ORTHO05D029244 3.8e-09 65.5 50 58.0
Gohir.D11G295775 Gossypium hirsutum HOM05D000005 ORTHO05D000012 3.8e-09 65.5 99 34.3
CSS0042100 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.9e-09 65.1 65 41.5
CARHR176790 Cardamine hirsuta HOM05D000005 ORTHO05D012152 4.9e-09 65.1 104 33.7
CARHR176940 Cardamine hirsuta HOM05D000005 ORTHO05D012152 4.9e-09 65.1 79 36.7
Gohir.A11G282539 Gossypium hirsutum HOM05D000005 ORTHO05D000012 4.9e-09 65.1 85 40.0
RcHm_v2.0_Chr1g0375951 Rosa chinensis HOM05D000005 ORTHO05D000012 4.9e-09 65.1 90 36.7
FAN14G0749 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.4e-09 64.7 84 38.1
MD10G1140900 Malus domestica HOM05D000005 ORTHO05D000012 6.4e-09 64.7 81 43.2
RcHm_v2.0_Chr5g0026101 Rosa chinensis HOM05D000005 ORTHO05D000012 6.4e-09 64.7 73 50.7
Sp2g10150 Schrenkiella parvula HOM05D000005 ORTHO05D012152 6.4e-09 64.7 95 36.8
AT4G12010 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 8.4e-09 64.3 106 34.0
BcaB03g11621 Brassica carinata HOM05D000005 ORTHO05D000012 8.4e-09 64.3 136 30.1
Ciclev10004174m.g Citrus clementina HOM05D000005 ORTHO05D000012 8.4e-09 64.3 79 36.7
FvH4_7g13090 Fragaria vesca HOM05D000005 ORTHO05D011727 8.4e-09 64.3 116 40.5
RcHm_v2.0_Chr6g0296221 Rosa chinensis HOM05D000005 ORTHO05D000012 8.4e-09 64.3 113 40.7
Gohir.D11G295400 Gossypium hirsutum HOM05D000005 ORTHO05D000012 1.1e-08 63.9 82 37.8
Gorai.007G318900 Gossypium raimondii HOM05D000005 ORTHO05D000012 1.1e-08 63.9 82 37.8
RcHm_v2.0_Chr1g0327611 Rosa chinensis HOM05D000005 ORTHO05D000012 1.1e-08 63.9 96 40.6
AL6G46810 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 1.4e-08 63.5 92 37.0
BcaC06g34470 Brassica carinata HOM05D000005 ORTHO05D012152 1.4e-08 63.5 108 31.5
C07p28100 Brassica napus HOM05D000005 ORTHO05D012152 1.4e-08 63.5 108 31.5
BolC7t43345H Brassica oleracea HOM05D000005 ORTHO05D012152 1.4e-08 63.5 108 31.5
Gohir.A11G282526 Gossypium hirsutum HOM05D000005 ORTHO05D000012 1.4e-08 63.5 97 34.0
RcHm_v2.0_Chr2g0101061 Rosa chinensis HOM05D000005 ORTHO05D000012 1.4e-08 63.5 85 37.6
Sp6g05500 Schrenkiella parvula HOM05D000005 ORTHO05D000012 1.4e-08 63.5 84 38.1
Carub.0006s3111 Capsella rubella HOM05D000005 ORTHO05D000012 1.9e-08 63.2 92 35.9
Atru.chr4.202 Acer truncatum HOM05D000005 ORTHO05D000012 2.4e-08 62.8 65 41.5
A05p15060 Brassica napus HOM05D000005 ORTHO05D000012 2.4e-08 62.8 88 34.1
BolC7t45549H Brassica oleracea HOM05D000005 ORTHO05D018471 2.4e-08 62.8 79 32.9
Manes.02G205900 Manihot esculenta HOM05D000005 ORTHO05D000012 2.4e-08 62.8 88 39.8
Cc00_g19420 Coffea canephora HOM05D000005 ORTHO05D001748 3.2e-08 62.4 46 50.0
FAN24G1099 Fragaria x ananassa HOM05D000005 ORTHO05D011727 3.2e-08 62.4 71 46.5
Gohir.D11G296000 Gossypium hirsutum HOM05D000005 ORTHO05D000012 3.2e-08 62.4 85 36.5
Lj3P257T7 Lonicera japonica HOM05D007424 ORTHO05D001748 3.2e-08 62.4 54 44.4
Manes.18G115300 Manihot esculenta HOM05D000005 ORTHO05D000012 3.2e-08 62.4 79 36.7
Phvul.002G098200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 3.2e-08 62.4 86 38.4
GSVIVG01036409001 Vitis vinifera HOM05D000005 ORTHO05D037847 3.2e-08 62.4 68 39.7
CSS0023467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.2e-08 62.0 60 41.7
Ciclev10018586m.g Citrus clementina HOM05D000005 ORTHO05D000012 4.2e-08 62.0 114 33.3
Manes.18G115500 Manihot esculenta HOM05D000005 ORTHO05D000012 4.2e-08 62.0 79 36.7
AT4G36150 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 5.4e-08 61.6 106 32.1
arahy.Tifrunner.gnm1.ann1.5IC1T0 Arachis hypogaea HOM05D000005 ORTHO05D000012 5.4e-08 61.6 77 42.9
FAN03G3058 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.4e-08 61.6 73 42.5
Gohir.A11G283813 Gossypium hirsutum HOM05D000005 ORTHO05D000012 5.4e-08 61.6 85 37.6
RcHm_v2.0_Chr6g0250241 Rosa chinensis HOM05D000005 ORTHO05D000012 5.4e-08 61.6 56 44.6
Cc00_g15130 Coffea canephora HOM05D000005 ORTHO05D000012 7.1e-08 61.2 46 50.0
Lj3C243T3 Lonicera japonica HOM05D000005 ORTHO05D001748 7.1e-08 61.2 41 58.5
Lj3C246T0 Lonicera japonica HOM05D000005 ORTHO05D001748 7.1e-08 61.2 44 54.5
arahy.Tifrunner.gnm1.ann1.P9Q3PR Arachis hypogaea HOM05D000005 ORTHO05D000012 9.3e-08 60.8 77 42.9
BcaB03g11623 Brassica carinata HOM05D000005 ORTHO05D000012 9.3e-08 60.8 112 31.2
BcaC01g00618 Brassica carinata HOM05D000005 ORTHO05D011295 9.3e-08 60.8 112 31.2
Ciclev10024480m.g Citrus clementina HOM05D000005 ORTHO05D000012 9.3e-08 60.8 116 37.1
Cc00_g23040 Coffea canephora HOM05D000005 ORTHO05D000012 9.3e-08 60.8 46 47.8
Cc08_g06820 Coffea canephora HOM05D000005 ORTHO05D000012 9.3e-08 60.8 46 47.8
FAN25G1384 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.3e-08 60.8 99 37.4
CSS0030182 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D013544 1.2e-07 60.5 50 44.0
Cpa.g.sc2.255 Carica papaya HOM05D000005 ORTHO05D000012 1.2e-07 60.5 88 33.0
Cc08_g06850 Coffea canephora HOM05D000005 ORTHO05D000012 1.2e-07 60.5 71 36.6
Gohir.D11G295925 Gossypium hirsutum HOM05D000005 ORTHO05D000012 1.2e-07 60.5 94 36.2
Lj3C250G3 Lonicera japonica HOM05D000005 ORTHO05D001748 1.2e-07 60.5 45 60.0
Lj4P589T39 Lonicera japonica HOM05D007424 ORTHO05D001748 1.2e-07 60.5 45 57.8
RcHm_v2.0_Chr1g0350001 Rosa chinensis HOM05D000405 ORTHO05D015660 1.2e-07 60.5 36 61.1
TWI53G1046 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 1.2e-07 60.5 96 33.3
Ciclev10018612m.g Citrus clementina HOM05D000005 ORTHO05D000012 1.6e-07 60.1 87 43.7
FAN11G3482 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.6e-07 60.1 98 36.7
FAN21G1239 Fragaria x ananassa HOM05D000005 ORTHO05D011727 1.6e-07 60.1 98 39.8
Glyma.20G020200 Glycine max HOM05D000005 ORTHO05D000012 1.6e-07 60.1 80 40.0
Lj3C248G2 Lonicera japonica HOM05D007424 ORTHO05D001748 1.6e-07 60.1 53 47.2
Lj3C253T4 Lonicera japonica HOM05D000005 ORTHO05D001748 1.6e-07 60.1 53 45.3
Lj3P243T8 Lonicera japonica HOM05D000005 ORTHO05D001748 1.6e-07 60.1 45 57.8
QL09p003532 Quercus lobata HOM05D000005 ORTHO05D000012 1.6e-07 60.1 71 40.8
RcHm_v2.0_Chr1g0375941 Rosa chinensis HOM05D000005 ORTHO05D000012 1.6e-07 60.1 69 37.7
GSVIVG01036408001 Vitis vinifera HOM05D000005 ORTHO05D000012 1.6e-07 60.1 73 35.6
BcaC04g21788 Brassica carinata HOM05D000005 ORTHO05D000012 2.1e-07 59.7 88 31.8
Cpa.g.sc2.256 Carica papaya HOM05D000005 ORTHO05D000012 2.1e-07 59.7 96 32.3
Cc00_g23220 Coffea canephora HOM05D000005 ORTHO05D000012 2.1e-07 59.7 46 47.8
Thhalv10027412m.g Eutrema salsugineum HOM05D000005 ORTHO05D018471 2.1e-07 59.7 93 31.2
RcHm_v2.0_Chr6g0247331 Rosa chinensis HOM05D000005 ORTHO05D000012 2.1e-07 59.7 49 42.9
Atru.chr4.1014 Acer truncatum HOM05D000005 ORTHO05D000012 2.7e-07 59.3 54 42.6
Thhalv10010076m.g Eutrema salsugineum HOM05D000005 ORTHO05D000012 2.7e-07 59.3 97 29.9
FAN19G2490 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.7e-07 59.3 52 44.2
Gohir.D11G295200 Gossypium hirsutum HOM05D000005 ORTHO05D000012 2.7e-07 59.3 84 34.5
Gorai.007G318500 Gossypium raimondii HOM05D000005 ORTHO05D000012 2.7e-07 59.3 84 34.5
Manes.18G107900 Manihot esculenta HOM05D000005 ORTHO05D000012 2.7e-07 59.3 138 30.4
TWI53G1638 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 2.7e-07 59.3 77 39.0
C09p27620 Brassica napus HOM05D000005 ORTHO05D000012 3.5e-07 58.9 88 31.8
Ciclev10014074m.g Citrus clementina HOM05D000005 ORTHO05D000012 3.5e-07 58.9 77 39.0
Ciclev10018524m.g Citrus clementina HOM05D000005 ORTHO05D000012 3.5e-07 58.9 78 42.3
Lj3C254T7 Lonicera japonica HOM05D007424 ORTHO05D001748 3.5e-07 58.9 45 57.8
BcaB07g30465 Brassica carinata HOM05D000005 ORTHO05D012152 4.6e-07 58.5 79 36.7
FvH4_1g22390 Fragaria vesca HOM05D000005 ORTHO05D000294 4.6e-07 58.5 82 32.9
Gohir.D11G295266 Gossypium hirsutum HOM05D000005 ORTHO05D000012 4.6e-07 58.5 85 34.1
QL09p003516 Quercus lobata HOM05D000005 ORTHO05D000012 4.6e-07 58.5 71 39.4
RcHm_v2.0_Chr6g0284581 Rosa chinensis HOM05D000005 ORTHO05D000012 4.6e-07 58.5 48 47.9
GSVIVG01025878001 Vitis vinifera HOM05D000005 ORTHO05D000012 4.6e-07 58.5 51 47.1
CSS0010161 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.0e-07 58.2 39 53.8
CARHR175210 Cardamine hirsuta HOM05D000005 ORTHO05D012152 6.0e-07 58.2 82 34.1
Dinv20734 Davidia involucrata HOM05D000005 ORTHO05D000012 6.0e-07 58.2 46 50.0
FvH4_7g28510 Fragaria vesca HOM05D000005 ORTHO05D000012 6.0e-07 58.2 67 38.8
FAN06G2885 Fragaria x ananassa HOM05D000015 ORTHO05D046655 6.0e-07 58.2 67 38.8
FAN06G3651 Fragaria x ananassa HOM05D000015 ORTHO05D046655 6.0e-07 58.2 67 38.8
Lj3A252T10 Lonicera japonica HOM05D007424 ORTHO05D001748 6.0e-07 58.2 47 51.1
Lj3C243G5 Lonicera japonica HOM05D000005 ORTHO05D001748 6.0e-07 58.2 54 42.6
Lj3C249T3 Lonicera japonica HOM05D000005 ORTHO05D001748 6.0e-07 58.2 54 42.6
MD03G1202400 Malus domestica HOM05D000005 ORTHO05D001748 6.0e-07 58.2 95 32.6
RcHm_v2.0_Chr1g0335971 Rosa chinensis HOM05D000005 ORTHO05D001748 6.0e-07 58.2 45 44.4
TWI53G0861 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 6.0e-07 58.2 68 35.3
GSVIVG01004873001 Vitis vinifera HOM05D000005 ORTHO05D000012 6.0e-07 58.2 47 48.9
Aa31LG6G2110 Aethionema arabicum HOM05D000005 ORTHO05D011295 7.9e-07 57.8 140 25.7
Aa31LG6G2120 Aethionema arabicum HOM05D000005 ORTHO05D000012 7.9e-07 57.8 140 25.7
CSS0035728 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 7.9e-07 57.8 87 32.2
FvH4_6g34410 Fragaria vesca HOM05D000005 ORTHO05D029419 7.9e-07 57.8 80 45.0
FAN01G0306 Fragaria x ananassa HOM05D000005 ORTHO05D001748 7.9e-07 57.8 80 36.2
FAN14G5055 Fragaria x ananassa HOM05D000005 ORTHO05D029419 7.9e-07 57.8 80 45.0
FAN27G0643 Fragaria x ananassa HOM05D000005 ORTHO05D001748 7.9e-07 57.8 41 53.7
Manes.18G111500 Manihot esculenta HOM05D000005 ORTHO05D000012 7.9e-07 57.8 81 37.0
RcHm_v2.0_Chr6g0250081 Rosa chinensis HOM05D000005 ORTHO05D001748 7.9e-07 57.8 83 34.9
RcHm_v2.0_Chr6g0284641 Rosa chinensis HOM05D000005 ORTHO05D000012 7.9e-07 57.8 48 43.8
BcaB03g11622 Brassica carinata HOM05D000005 ORTHO05D011295 1.0e-06 57.4 76 35.5
CSS0027623 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.0e-06 57.4 62 37.1
Ciclev10018644m.g Citrus clementina HOM05D000005 ORTHO05D000012 1.0e-06 57.4 105 34.3
Gohir.D11G295500 Gossypium hirsutum HOM05D000005 ORTHO05D000012 1.0e-06 57.4 88 34.1
RcHm_v2.0_Chr6g0270371 Rosa chinensis HOM05D000005 ORTHO05D001748 1.0e-06 57.4 68 41.2
Cc00_g19200 Coffea canephora HOM05D000005 ORTHO05D000012 1.3e-06 57.0 47 44.7
Gorai.007G318700 Gossypium raimondii HOM05D000005 ORTHO05D000012 1.3e-06 57.0 86 37.2
Solyc04g056570.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 1.3e-06 57.0 54 37.0
GSVIVG01025875001 Vitis vinifera HOM05D000005 ORTHO05D000012 1.3e-06 57.0 70 41.4
CSS0039621 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.7e-06 56.6 64 35.9
RcHm_v2.0_Chr1g0349181 Rosa chinensis HOM05D000005 ORTHO05D001748 1.7e-06 56.6 39 48.7
RcHm_v2.0_Chr4g0401031 Rosa chinensis HOM05D037337 ORTHO05D001748 1.7e-06 56.6 54 35.2
CARHR177110 Cardamine hirsuta HOM05D000005 ORTHO05D000012 2.3e-06 56.2 99 30.3
Thhalv10000750m.g Eutrema salsugineum HOM05D000005 ORTHO05D000012 2.3e-06 56.2 88 31.8
FAN03G1863 Fragaria x ananassa HOM05D000005 ORTHO05D001748 2.3e-06 56.2 89 32.6
FAN03G2217 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.3e-06 56.2 89 32.6
Peaxi162Scf00177g01132 Petunia axillaris HOM05D000005 ORTHO05D001748 2.3e-06 56.2 43 46.5
RcHm_v2.0_Chr6g0251471 Rosa chinensis HOM05D000005 ORTHO05D001748 2.3e-06 56.2 75 34.7
BcaNung06446 Brassica carinata HOM05D000005 ORTHO05D000012 3.0e-06 55.8 92 33.7
FvH4_3g05740 Fragaria vesca HOM05D000005 ORTHO05D000012 3.0e-06 55.8 98 35.7
Gorai.007G319000 Gossypium raimondii HOM05D000005 ORTHO05D000012 3.0e-06 55.8 71 36.6
Lj3A247T22 Lonicera japonica HOM05D007424 ORTHO05D001748 3.0e-06 55.8 48 54.2
Lj3A256T9 Lonicera japonica HOM05D000005 ORTHO05D001748 3.0e-06 55.8 40 57.5
RcHm_v2.0_Chr2g0144731 Rosa chinensis HOM05D000005 ORTHO05D029419 3.0e-06 55.8 84 44.0
RcHm_v2.0_Chr6g0249921 Rosa chinensis HOM05D000005 ORTHO05D001748 3.0e-06 55.8 71 36.6
Atru.chr2.43 Acer truncatum HOM05D000005 ORTHO05D019392 3.9e-06 55.5 85 31.8
AL7G34080 Arabidopsis lyrata HOM05D004848 ORTHO05D006859 3.9e-06 55.5 103 31.1
BcaB07g30900 Brassica carinata HOM05D000005 ORTHO05D000012 3.9e-06 55.5 89 32.6
Ciclev10018611m.g Citrus clementina HOM05D000005 ORTHO05D000012 3.9e-06 55.5 39 59.0
Ciclev10022183m.g Citrus clementina HOM05D000005 ORTHO05D019027 3.9e-06 55.5 70 41.4
Gohir.A11G283852 Gossypium hirsutum HOM05D000005 ORTHO05D000012 3.9e-06 55.5 73 39.7
Lj3A254T21 Lonicera japonica HOM05D000005 ORTHO05D001748 3.9e-06 55.5 46 56.5
RcHm_v2.0_Chr1g0333931 Rosa chinensis HOM05D065865 ORTHO05D011727 3.9e-06 55.5 72 43.1
RcHm_v2.0_Chr6g0249841 Rosa chinensis HOM05D000005 ORTHO05D000012 3.9e-06 55.5 71 38.0
GSVIVG01012761001 Vitis vinifera HOM05D000005 ORTHO05D001748 3.9e-06 55.5 43 48.8
GSVIVG01025885001 Vitis vinifera HOM05D000005 ORTHO05D000012 3.9e-06 55.5 46 43.5
CSS0042085 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 5.1e-06 55.1 77 39.0
Carub.0008s0294 Capsella rubella HOM05D000005 ORTHO05D000012 5.1e-06 55.1 95 30.5
Dinv25477 Davidia involucrata HOM05D000005 ORTHO05D000012 5.1e-06 55.1 102 31.4
FvH4_7g17700 Fragaria vesca HOM05D000005 ORTHO05D000012 5.1e-06 55.1 57 40.4
FAN06G0883 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.1e-06 55.1 57 40.4
FAN06G1031 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.1e-06 55.1 57 40.4
FAN06G3544 Fragaria x ananassa HOM05D000005 ORTHO05D001748 5.1e-06 55.1 67 38.8
Manes.18G112400 Manihot esculenta HOM05D000005 ORTHO05D000012 5.1e-06 55.1 47 46.8
RcHm_v2.0_Chr1g0322041 Rosa chinensis HOM05D000005 ORTHO05D000012 5.1e-06 55.1 44 45.5
RcHm_v2.0_Chr6g0246501 Rosa chinensis HOM05D000005 ORTHO05D001748 5.1e-06 55.1 39 51.3
RcHm_v2.0_Chr6g0249221 Rosa chinensis HOM05D000005 ORTHO05D001748 5.1e-06 55.1 78 34.6
RcHm_v2.0_Chr6g0266131 Rosa chinensis HOM05D000005 ORTHO05D001748 5.1e-06 55.1 39 53.8
Solyc04g007320.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 5.1e-06 55.1 65 40.0
Sopen04g002380 Solanum pennellii HOM05D000005 ORTHO05D000012 5.1e-06 55.1 65 40.0
Aa31LG9G7780 Aethionema arabicum HOM05D000005 ORTHO05D012152 6.6e-06 54.7 87 31.0
AL7G14890 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 6.6e-06 54.7 92 31.5
AT3G51570 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 6.6e-06 54.7 92 26.1
BraA02t07927Z Brassica rapa HOM05D000005 ORTHO05D000012 6.6e-06 54.7 88 29.5
CARHR177620 Cardamine hirsuta HOM05D000005 ORTHO05D000012 6.6e-06 54.7 96 28.1
Ciclev10018520m.g Citrus clementina HOM05D000005 ORTHO05D000012 6.6e-06 54.7 85 36.5
Ciclev10018526m.g Citrus clementina HOM05D000005 ORTHO05D000012 6.6e-06 54.7 85 36.5
Lj3A247T21 Lonicera japonica HOM05D007424 ORTHO05D001748 6.6e-06 54.7 46 54.3
MD04G1200400 Malus domestica HOM05D000005 ORTHO05D000012 6.6e-06 54.7 67 37.3
Potri.019G070479 Populus trichocarpa HOM05D000005 ORTHO05D000012 6.6e-06 54.7 79 35.4
PGSC0003DMG400006003 Solanum tuberosum HOM05D000005 ORTHO05D000012 6.6e-06 54.7 43 44.2
Cc11_g00700 Coffea canephora HOM05D000005 ORTHO05D000012 8.7e-06 54.3 46 45.7
FAN06G3554 Fragaria x ananassa HOM05D000005 ORTHO05D011727 8.7e-06 54.3 82 43.9
Gohir.A11G282552 Gossypium hirsutum HOM05D000005 ORTHO05D000012 8.7e-06 54.3 79 35.4
Potri.019G070651 Populus trichocarpa HOM05D000005 ORTHO05D000012 8.7e-06 54.3 79 31.6
RcHm_v2.0_Chr1g0349221 Rosa chinensis HOM05D000005 ORTHO05D000012 8.7e-06 54.3 40 47.5
RcHm_v2.0_Chr6g0245551 Rosa chinensis HOM05D000005 ORTHO05D001748 8.7e-06 54.3 54 40.7
GSVIVG01012762001 Vitis vinifera HOM05D000005 ORTHO05D000012 8.7e-06 54.3 45 42.2
GSVIVG01034639001 Vitis vinifera HOM05D000005 ORTHO05D001748 8.7e-06 54.3 45 48.9


User provided reference genes

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